Nucleotide Global Alignment

Description

Query:
TRCN0000470042
Subject:
XM_017009196.1
Aligned Length:
1819
Identities:
1646
Gaps:
167

Alignment

Query    1  ATG-TTTGGGATTCAGGAAAGCATCCAACGGAGTGGAAGCAGCATGAAGGAAGAGCCGCTGGGCAGCGGCATGA  73
            ||| ||||||                                      |||||||                   
Sbjct    1  ATGTTTTGGG--------------------------------------GGAAGAG-------------------  17

Query   74  ACGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCTG  147
                                                                      ||||||||||||||||
Sbjct   18  ----------------------------------------------------------GAGCGGGGTGGGTCTG  33

Query  148  GCCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTGCGGAAATCCAACTTCTTCCACTTCGTCCTGGCCCT  221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   34  GCCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTGCGGAAATCCAACTTCTTCCACTTCGTCCTGGCCCT  107

Query  222  CTACGACAGACAGGGCCAGCCCGTGGAGATCGAGAGGACAGCGTTTGTGGGGTTCGTGGAGAAGGAAAAAGAAG  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  108  CTACGACAGACAGGGCCAGCCCGTGGAGATCGAGAGGACAGCGTTTGTGGGGTTCGTGGAGAAGGAAAAAGAAG  181

Query  296  CCAACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGGAG  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  182  CCAACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGGAG  255

Query  370  CAGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACCC  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  256  CAGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACCC  329

Query  444  AGAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAACC  517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  330  AGAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAACC  403

Query  518  GAAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTAACCAAAAT  591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  404  GAAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTAACCAAAAT  477

Query  592  TGCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGGA  665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  478  TGCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGGA  551

Query  666  TGGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCGGAGGC  739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  TGGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCGGAGGC  625

Query  740  TTGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACAT---GCTACTCCCTGTATCAAAGCCATCAGCCCGAGT  810
            ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||
Sbjct  626  TTGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACATGCAGCTACTCCCTGTATCAAAGCCATCAGCCCGAGT  699

Query  811  GAAGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATATT  884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  700  GAAGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATATT  773

Query  885  CGGTACCATGCTGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCGGCACATCC  958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  774  CGGTACCATGCTGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCGGCACATCC  847

Query  959  CTGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGATTCATTTAT  1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  848  CTGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGATTCATTTAT  921

Query 1033  ACAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTGA  1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  922  ACAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTGA  995

Query 1107  CCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCAC  1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  996  CCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCAC  1069

Query 1181  ACAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCCGCAACCAC  1254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1070  ACAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCCGCAACCAC  1143

Query 1255  AACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACT  1328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144  AACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACT  1217

Query 1329  GGCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCAGCGTATCACCAC  1402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1218  GGCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCAGCGTATCACCAC  1291

Query 1403  ACGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCATGAACGGATACGGC  1476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292  ACGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCATGAACGGATACGGC  1365

Query 1477  TCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCAT  1550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366  TCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCAT  1439

Query 1551  AGTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCTTCT  1624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440  AGTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCTTCT  1513

Query 1625  CCTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAGACC  1698
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514  CCTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAGACC  1587

Query 1699  TCCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAGCGATATCTGGCATGATTGT---------  1763
            ||||||||||||||||||||||||||||||||||||||||||||||    |||.|.|.|  ||||         
Sbjct 1588  TCCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAG----ATCAGTCTT--TTGTGGACTCTAG  1655

Query 1764  ----TCCTCCTATG-----------------------------  1773
                |.||||..||                             
Sbjct 1656  CAAGTTCTCCAGTGCAGGGTCTCTCCCGGGACTGGCCTTCTCC  1698

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