Nucleotide Global Alignment
Description
- Query:
- TRCN0000470046
- Subject:
- NM_001081216.1
- Aligned Length:
- 5467
- Identities:
- 1874
- Gaps:
- 3350
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTCGTGAGAGGAAAGGCCTCTCGGAGCTGCGATCGGAGCTCTACTTCCTCATCGCCCGGTTCCTGGAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGACCCTGTCAGCAGGCGGCTCAGGTGCTGATCCGCGAAGTGGCCGAGAAGGAGCTGCTGCCCCGGCGCACCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTGGACCGGGAAGGAGCACCCCAGGACCTACCAGAATCTGGTGAAGTATTATAGACACCTTGCACCTGATCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCTGCAAATATGTCATCGGCTAGGACCTCTTCTTGAGCAAGAAATTCCTCAGAGTGTTCCTGGAGTACAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTACTAGGAGCTGGAAGACAGTCCTTGCTACGAACAAATAAAAGCTGCAAGCATGTGGTATGGAAAGGATCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTGGCTGCACTGCACTGTGGGAGGCCGCCAGAGTCTCCAGTTAACTACGGTAGCCCACCTAGCATTGCGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCTGTTTTCAAGGAAGCTGAATGGGAAATACAGACTTGAACGACTTGTTCCAACTGCAGTTTATCAGCACAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGATGCATAAGCGAATTCTTGGACACTTATCATCGGTGTACTGTGTAACTTTTGATCGAACTGGCAGGCGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATTTACTGGTTCTGATGATTGTCTTGTGAAAATCTGGGCCACAGACGATGGAAGATTGCTAGCTACTTTAAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGACATGCTGCTGAAATATCAGACATGGCTGTAAACTATGAGAATACTATGATAGCAGCTGGAAGTTGTGATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATGATTCGTGTCTGGTGTCTTCGAACCTGTGCACCTTTGGCTGTTCTTCAGGGACATAGTGCATCTATTACAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACTACAGTTCTCACCATTGTGCAGTGGCTCAAAGAGATACCTGTCTTCTACAGGGGCGGACGGCACTATTTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTGGCTTTGGGATGCTGGAACCCTTAAAATAAATCCAAGACCCACAAAATTTACAGAGCGTCCTCGGCCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTTTTTGGCCACTGGAAGCACTGACCATATTATTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGTTTATTTTTTTGGATCAGGTCAGCCAGAAAAAATATCAGAATTGGAGTTTCATACTGACAAAGTTGACAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCCAGTTTTCCAACACTAGTAACAGGTTTGTGAGTGGTAGTCGTGATGGGACAGCACGAATTTGGCAGTTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACGAAGGGAATGGAAAAGCATTTTGTTAGATATGGCTACTCGTCCAGCAGGCCAAAATCTTCAAGGCATAGAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAAAATCACAAAAATGAAAGTAACTATGGTAGCTTGGGATCGACATGACAACACAGTTATAACTGCAGTTAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACATGACTCTGAAAGTTTGGAATTCTTATACTGGTCAACTGATACATGTTCTAATGGGTCATGAAGATGAGGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTTGTTCTTGAGCCACACCCATTTGATCCTAGAGTTCTCTTCTCTGCTGGTCATGATGGAAATGTGATAGTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGATCTAGCAAGAGGAGTCAAAGTTCGATCTTATTTCAATATGATTGAAGGACAAGGACATGGTGCAGTGTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACTGCAAATGCTCCCCTGATGGTCAGCACTTTGCATGTACAGACTCTCATGGACATCTTTTAATTTTTGGTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGGTCCAGTAGCAAGTATGACAAGATAGCAGATCAGATGTTTTTTCACAGTGATTATCGGCCTCTTATCCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGCGAACAATTTTGTATTAGATGAGCAGACGCAGCAGGCACCTCACCTCATGCCTCCCCCTTTTCTGGTTGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTGATGGAAATCCTCATCCATCAAGGTACCAGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATTCCTCAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTTTTGAGCCAGCAAGCAAACCAGGATATTAGTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTTAGACAGCATGATTCAAAGACTGCAGCAGGAGCAGGACCTGAGGCGTTCGGGTGAAGCAGGTGTTAGTAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCAGCCGTGTGAACAGAGGCTCAGTAAGTTCTACCTCCGAAGTTCATTCACCACCAAATATAGGATTAAGGCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGTTGCTTGGAGTCGGAGGGTAGTAGTGCCTGAGCTCTCGGCTGGTGTGGCTAGTAGACAAGAAGAATGGAGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACTGCAAAGGGAGAAGAGGAAATAAAGAGTTATAGATCAGAAGAGAAAAGGAAACACTTAACTGTTGCAAAAGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAATAAAATACTTACTGTCTCAAAGAATCATGCTCATGAGCATTTCCTGGATCTTGGGGATTCTAAAAAGCAGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGCGAATCAGCACAATTACCGTACAAGATCTGCACTGGAAGAAACACCCAGGCCCTTAGAGGAGCTAGAAAAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGAACTAGTTCTTCAGATGAAGGTGAAGTACTTGCTGTCAGTGGTGGGACTTCTGAGGAAGAGGAGCGAGCATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCACAGTGATGGCAGCTCCAGTGACTACTCCAGTGATTATTCTGATTGGACAGCAGATGCTGGAATTAACTTGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGCCACCAAAGAAAGTTCCTAAGCATAAAACCAAGAAACCAGAAAGTAGTTCAGATGAAGAAGAAGAATCTGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AACCAGAAGCAAAAACATATTAAAAAGGAAAGAAAAAAAGCAAATGAAGAAAAAGATGGACCAACATCACCAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAAAAAAAAGCCCAAAGAAAGAAAACAAAAGAGATTGGCTGTAGGAGAACTAACTGAGAATGGCCTAACGTTAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGAGTGGTTGCCTTCAGCTTGGATTACAGACACACTTCCCAGGAGATGTCCATTTGTGCCACAGATGGGTGAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGGTTTATTATTTTCGACAAGGGCATGAAGCATATGTTGAAATGGCCCGGAAAAATAAAATTTATAGTATCAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCCTAAAAAGCAGCCATGGCATAAGATGGAACTAAGGGAACAAGAACTAATGAAAATTGTTGGTATAAAGTATG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAGTGGGGTTGCCTACCCTTTGCTGCCTTAAACTTGCTTTTCTAGATCCTGATACTGGCAAACTGACCGGTGGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCATTTACCATGAAATACCATGATATGCCTGACGTCATAGATTTTCTAGTCTTGAGACAACAATTTGATGATGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AAAGTATAGACGATGGAATATAGGTGACCGCTTCAGATCTGTCATAGATGATGCCTGGTGGTTTGGAACAATTG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAGTCAAGAGCCTCTTCAACCTGAGTACCCTGATAGTTTGTTTCAGTGTTATAATGTATGTTGGGACAATGGA 3330
Query 1 ------------ATGAGTCCTTGGGATATGGAGCTTATACCTAATAATGCTGTATTTCCTGAAGAACTAGGTAC 62
||||||||||||||||||||..|.|||||||||||||||||.|||||.||||||||.|||||
Sbjct 3331 GATACAGAAAAGATGAGTCCTTGGGATATGGAATTAATACCTAATAATGCTGTCTTTCCAGAAGAACTGGGTAC 3404
Query 63 CAGTGTTCCTTTAACTGATGGTGAGTGCAGATCACTAATCTATAAACCTCTTGATGGAGAATGGGGTACCAATC 136
||||||||||||||||||||.|||.||.||.||.|||||.||||||||||||||||||||||||||..||||||
Sbjct 3405 CAGTGTTCCTTTAACTGATGTTGAATGTAGGTCGCTAATTTATAAACCTCTTGATGGAGAATGGGGAGCCAATC 3478
Query 137 CCAGGGATGAAGAATGTGAAAGAATTGTGGCAGGAATAAACCAGTTGATGACACTAGATATTGCCTCAGCATTT 210
||||||||||||||||||||||||||||.|.|||||||||.|||.|||||||||||||||||||.||.||||||
Sbjct 3479 CCAGGGATGAAGAATGTGAAAGAATTGTTGGAGGAATAAATCAGCTGATGACACTAGATATTGCGTCTGCATTT 3552
Query 211 GTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTATTGCACAGTAGTGGCATATCCAACGGATCTAAGTACAAT 284
||.|||||.|||||.||.|||||.|||||||||||||||||.||.|||||.|||||||||||||||||||||||
Sbjct 3553 GTTGCCCCTGTGGACCTTCAAGCTTATCCCATGTATTGCACTGTGGTGGCCTATCCAACGGATCTAAGTACAAT 3626
Query 285 TAAACAAAGACTGGAAAACAGGTTTTACAGGCGGGTTTCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATA 358
|||||||||||||||.|||||||||||||||||..||||.||.||||||||||||||||||||||||||.||||
Sbjct 3627 TAAACAAAGACTGGAGAACAGGTTTTACAGGCGCTTTTCATCACTAATGTGGGAAGTTCGATATATAGAACATA 3700
Query 359 ATACACGAACATTTAATGAGCCTGGAAGCCCTATTGTGAAATCTGCTAAATTCGTGACTGATCTTCTTCTACAT 432
|||||||||||||.||||||||.||||||||.||||||||||||||||||||.||||||||||||||.||.|||
Sbjct 3701 ATACACGAACATTCAATGAGCCAGGAAGCCCAATTGTGAAATCTGCTAAATTTGTGACTGATCTTCTCCTGCAT 3774
Query 433 TTTATAAAGGATCAGACTTGTTATAACATAATTCCACTTTATAATTCAATGAAGAAGAAAGTTTTGTCTGATTC 506
|||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.||
Sbjct 3775 TTTATAAAGGATCAGACTTGTTATAACATAATTCCACTTTACAACTCAATGAAGAAGAAAGTTTTGTCTGACTC 3848
Query 507 TGAGGATGAAGAGAAAGATGCTGATGTGCCAGGAACTTCTACTCGAAAAAGGAAGGACCATCAGCCTAGAAGAA 580
||||||.||||||||||||||||||||.|||||.||||||||..||||..|.|||||.|||||.||||||||||
Sbjct 3849 TGAGGAAGAAGAGAAAGATGCTGATGTTCCAGGGACTTCTACCAGAAAGCGCAAGGATCATCAACCTAGAAGAA 3922
Query 581 GATTACGTAATAGAGCCCAGTCTTACGATATTCAAGCATGGAAGAAACAGTGTGAAGAATTGTTAAATCTCATA 654
|.|||||.||.|||||.|||||||||||||||||.||||||||||||||.|||.|||||||..|.|||||||||
Sbjct 3923 GGTTACGCAACAGAGCTCAGTCTTACGATATTCAGGCATGGAAGAAACAATGTCAAGAATTACTGAATCTCATA 3996
Query 655 TTTCAATGTGAAGATTCAGAGCCTTTCCGTCAGCCGGTAGATCTCCTTGAATATCCAGACTACAGAGACATCAT 728
||||||||||||||.|||||.|||||.||.|||||.||.|||||.|||||||||||||||||||||||||||||
Sbjct 3997 TTTCAATGTGAAGACTCAGAACCTTTTCGACAGCCAGTGGATCTTCTTGAATATCCAGACTACAGAGACATCAT 4070
Query 729 TGACACTCCAATGGATTTTGCTACCGTTAGAGAAACTTTAGAGGCTGGGAATTATGAGTCACCAATGGAGTTAT 802
|||||||||||||||.|||||.||.||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 4071 TGACACTCCAATGGACTTTGCCACTGTTAGAGAGACTTTAGAGGCTGGGAATTATGAGTCACCCATGGAGTTAT 4144
Query 803 GTAAAGATGTCAGACTTATTTTCAGTAATTCCAAAGCATATACACCAAGCAAAAGATCAAGGATTTACAGCATG 876
|||||||||||||.||.||||||||||||||.||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 4145 GTAAAGATGTCAGGCTCATTTTCAGTAATTCTAAAGCATACACACCAAGCAAGAGATCAAGGATTTACAGCATG 4218
Query 877 AGTTTGCGCTTGTCTGCATTCTTTGAAGAACACATTAGTTCAGTTTTATCAGATTATAAATCTGCTCTTCGTTT 950
|||||.|||.|||||||.||||||||||||||.||||||||||||||.||||||||||||||||||||||||||
Sbjct 4219 AGTTTACGCCTGTCTGCTTTCTTTGAAGAACATATTAGTTCAGTTTTGTCAGATTATAAATCTGCTCTTCGTTT 4292
Query 951 TCATAAAAGAAATACCATAACCAAAAGGAGGAAGAAAAGAAACAGAAGCAGCTCTGTTTCCAGTAGTGCTGCAT 1024
||||||||||||.|||||||.|||.|.|||||||||..|||||||.|||||.||..|.|||||.||||||||.|
Sbjct 4293 TCATAAAAGAAACACCATAAGCAAGAAGAGGAAGAAGCGAAACAGGAGCAGTTCCCTGTCCAGCAGTGCTGCCT 4366
Query 1025 CAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAATCAGAAAGCTCTACCTCTGCATTCTCTACA 1098
|||||||||||||||||||||||||||||||||||||||||||.||||||...|||||||||.|||||||.|.|
Sbjct 4367 CAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAGTCAGAAGTATCTACCTCTCCATTCTCCATA 4440
Query 1099 CCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCG 1172
||||||.|||||.|||..||||||||.||||||||.||.||.||.||||||.|||||||.||||||||||||||
Sbjct 4441 CCTACAAGATCAGTACTACCAAGACATAATGCTGCGCAAATGAATGGTAAACCAGAATCCAGTTCTGTGGTTCG 4514
Query 1173 AACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTT 1246
|||.||.||||||||.||.|.||||||||||||||||||.|||||.||.|||||.||.|||||..||||..|||
Sbjct 4515 AACTAGGAGCAACCGTGTAGCTGTAGATCCAGTTGTCACCGAGCAGCCCTCTACATCATCAGCCACAAAAGCTT 4588
Query 1247 TTATTACAAAAGCTAATGCATCTGCAATACCAGGGAAAACAATACTAGAGAATTCTGTGAAACATTCCAAAGCT 1320
||.||.|||||.|||||.|||||||.||.|||||.|||.||||.||||||||||||||||.||||||||||||.
Sbjct 4589 TTGTTTCAAAAACTAATACATCTGCCATGCCAGGAAAAGCAATGCTAGAGAATTCTGTGAGACATTCCAAAGCC 4662
Query 1321 TTGAATACTCTTTCCAGTCCTGGTCAATC----CAGTTTTAGTCATGGCACTAGGAATAATTCTGCAAAAGAAA 1390
||||..||.||||||||.|||| ||| ||..||.||.||||..||.|.||||||||||||||||||||
Sbjct 4663 TTGAGCACACTTTCCAGCCCTG----ATCCGCTCACATTCAGCCATGCTACAAAGAATAATTCTGCAAAAGAAA 4732
Query 1391 ACATGGAAAAGGAAAAGCCAGTCAAACGTAAAATGAAGTCATCTGTACTCCCAAAGGCGTCCACTCTTTCAAAG 1464
|||||||||||||||||||.||||||||||||||||||||.|||||..|..||||.||.||..|.|||.|||||
Sbjct 4733 ACATGGAAAAGGAAAAGCCTGTCAAACGTAAAATGAAGTCTTCTGTGTTTTCAAAAGCATCTCCACTTCCAAAG 4806
Query 1465 TCATCAGCTGTCATTGAGCAAGGAGATTGTAAGAACAACGCTCTTGTACCAGGAACCATTCAAGTAAATGGCCA 1538
|||.|.||.|||||.|||||||||||.|||||||||||.|.||||.||||||||||||||||||||||||||||
Sbjct 4807 TCAGCCGCAGTCATAGAGCAAGGAGAGTGTAAGAACAATGTTCTTATACCAGGAACCATTCAAGTAAATGGCCA 4880
Query 1539 TGGAGGACAGCCATCAAAACTTGTGAAGAGGGGACCTGGAAGGAAACCTAAAGTAGAAGTTAATACCAATAGTG 1612
|||||||||.|||||||||||.||||||||.||||||||.|||||.||.||.|||||||||||.||||..||||
Sbjct 4881 TGGAGGACAACCATCAAAACTCGTGAAGAGAGGACCTGGGAGGAAGCCCAAGGTAGAAGTTAACACCAGCAGTG 4954
Query 1613 GTGAAATTATACACAAGAAAAGGGGTAGAAAGCCCAAAAAGCTACAGTATGCAAAGCCAGAAGATTTAGAGCAA 1686
|||||.|.|.||||||||||||.||||||||||||||.||.||.||||.||||||||..|||.|.|..||||||
Sbjct 4955 GTGAAGTGACACACAAGAAAAGAGGTAGAAAGCCCAAGAATCTGCAGTGTGCAAAGCAGGAAAACTCTGAGCAA 5028
Query 1687 AATAATGTGCATCCCATCAGAGATGAAGTACTTCCTTCTTCAACATGCAATTTTCTTTCTGAAACTAATAATGT 1760
|||||..|||||||||||||.|.|||.||.||||||||||||||||||||.||.|||||||||||||||..|||
Sbjct 5029 AATAACATGCATCCCATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAACTAATGCTGT 5102
Query 1761 AAAGGAAGATTTGTTACAGAAAAAGAATCGTGGAGGTAGGAAGCCCAAAAGGAAGATGAAGACACAAAAATTAG 1834
.|||||.|||||||||||||||||||.|||||||||.||.||.|||||||||||||||||.||.||.||..|||
Sbjct 5103 CAAGGAGGATTTGTTACAGAAAAAGAGTCGTGGAGGCAGAAAACCCAAAAGGAAGATGAAAACTCACAACCTAG 5176
Query 1835 ATGCAGATCTCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGGAGAAGTAACCGAAAAAAGATAGATGATCCTATA 1908
||.||||.|||.||||.|||.|||.|||.|||||||||||||||||||||||.|||||.|.|||||||||||||
Sbjct 5177 ATTCAGAACTCATAGTTCCTACAAATGTTAAAGTGTTAAGGAGAAGTAACCGGAAAAAAACAGATGATCCTATA 5250
Query 1909 GATGAGGAAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACCCCACATGAGAACTAGAAATCAAGGTCGAAGGAC 1982
|||||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||.|||||||||||
Sbjct 5251 GATGAGGAAGAGGAGTTTGAAGAACTCAAAGGCTCTGAGCCTCACATGAGAACTAGAAATCAGGGTCGAAGGAC 5324
Query 1983 AGCTTTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTCGAAGACACCTCTTTAACTTTTG 2056
||||||||||||||||||||||||.||.||.||.||.||.||||||||||||||.||||||||.||.||.||||
Sbjct 5325 AGCTTTCTATAATGAGGATGACTCGGAGGAAGAACAGAGACAGCTGTTGTTCGAGGACACCTCCTTGACATTTG 5398
Query 2057 GAACTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAAGCTAATTTAATTGGTTGG 2121
||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 5399 GAACTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAGGCTAATTTAATTGGTTGG 5463
