Nucleotide Global Alignment
Description
- Query:
- TRCN0000470046
- Subject:
- XM_006511564.3
- Aligned Length:
- 5464
- Identities:
- 1874
- Gaps:
- 3347
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTCGTGAGAGGAAAGGCCTCTCGGAGCTGCGATCGGAGCTCTACTTCCTCATCGCCCGGTTCCTGGAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGACCCTGTCAGCAGGCGGCTCAGGTGCTGATCCGCGAAGTGGCCGAGAAGGAGCTGCTGCCCCGGCGCACCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTGGACCGGGAAGGAGCACCCCAGGACCTACCAGAATCTGGTGAAGTATTATAGACACCTTGCACCTGATCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCTGCAAATATGTCATCGGCTAGGACCTCTTCTTGAGCAAGAAATTCCTCAGAGTGTTCCTGGAGTACAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTACTAGGAGCTGGAAGACAGTCCTTGCTACGAACAAATAAAAGCTGCAAGCATGTGGTATGGAAAGGATCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTGGCTGCACTGCACTGTGGGAGGCCGCCAGAGTCTCCAGTTAACTACGGTAGCCCACCTAGCATTGCGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCTGTTTTCAAGGAAGCTGAATGGGAAATACAGACTTGAACGACTTGTTCCAACTGCAGTTTATCAGCACAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGATGCATAAGCGAATTCTTGGACACTTATCATCGGTGTACTGTGTAACTTTTGATCGAACTGGCAGGCGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATTTACTGGTTCTGATGATTGTCTTGTGAAAATCTGGGCCACAGACGATGGAAGATTGCTAGCTACTTTAAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGACATGCTGCTGAAATATCAGACATGGCTGTAAACTATGAGAATACTATGATAGCAGCTGGAAGTTGTGATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATGATTCGTGTCTGGTGTCTTCGAACCTGTGCACCTTTGGCTGTTCTTCAGGGACATAGTGCATCTATTACAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACTACAGTTCTCACCATTGTGCAGTGGCTCAAAGAGATACCTGTCTTCTACAGGGGCGGACGGCACTATTTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTGGCTTTGGGATGCTGGAACCCTTAAAATAAATCCAAGACCCACAAAATTTACAGAGCGTCCTCGGCCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTTTTTGGCCACTGGAAGCACTGACCATATTATTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGTTTATTTTTTTGGATCAGGTCAGCCAGAAAAAATATCAGAATTGGAGTTTCATACTGACAAAGTTGACAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCCAGTTTTCCAACACTAGTAACAGGTTTGTGAGTGGTAGTCGTGATGGGACAGCACGAATTTGGCAGTTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACGAAGGGAATGGAAAAGCATTTTGTTAGATATGGCTACTCGTCCAGCAGGCCAAAATCTTCAAGGCATAGAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAAAATCACAAAAATGAAAGTAACTATGGTAGCTTGGGATCGACATGACAACACAGTTATAACTGCAGTTAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACATGACTCTGAAAGTTTGGAATTCTTATACTGGTCAACTGATACATGTTCTAATGGGTCATGAAGATGAGGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTTGTTCTTGAGCCACACCCATTTGATCCTAGAGTTCTCTTCTCTGCTGGTCATGATGGAAATGTGATAGTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGATCTAGCAAGAGGAGTCAAAGTTCGATCTTATTTCAATATGATTGAAGGACAAGGACATGGTGCAGTGTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACTGCAAATGCTCCCCTGATGGTCAGCACTTTGCATGTACAGACTCTCATGGACATCTTTTAATTTTTGGTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGGTCCAGTAGCAAGTATGACAAGATAGCAGATCAGATGTTTTTTCACAGTGATTATCGGCCTCTTATCCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGCGAACAATTTTGTATTAGATGAGCAGACGCAGCAGGCACCTCACCTCATGCCTCCCCCTTTTCTGGTTGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTGATGGAAATCCTCATCCATCAAGGTACCAGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAGGAGCAGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATTCCTCAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTTTTGAGCCAGCAAGCAAACCAGGATATTAGTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTTAGACAGCATGATTCAAAGACTGCAGCAGGAGCAGGACCTGAGGCGTTCGGGTGAAGCAGGTGTTAGTAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCAGCCGTGTGAACAGAGGCTCAGTAAGTTCTACCTCCGAAGTTCATTCACCACCAAATATAGGATTAAGGCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGAGCGAGATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGTTGCTTGGAGTCGGAGGGTAGTAGTGCCTGAGCTCTCGGCTGGTGTGGCTAGACAAGAAGAATGGAGAACT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCAAAGGGAGAAGAGGAAATAAAGAGTTATAGATCAGAAGAGAAAAGGAAACACTTAACTGTTGCAAAAGAGAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAAATACTTACTGTCTCAAAGAATCATGCTCATGAGCATTTCCTGGATCTTGGGGATTCTAAAAAGCAGCAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGAATCAGCACAATTACCGTACAAGATCTGCACTGGAAGAAACACCCAGGCCCTTAGAGGAGCTAGAAAACGGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTAGTTCTTCAGATGAAGGTGAAGTACTTGCTGTCAGTGGTGGGACTTCTGAGGAAGAGGAGCGAGCATGGCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGTGATGGCAGCTCCAGTGACTACTCCAGTGATTATTCTGATTGGACAGCAGATGCTGGAATTAACTTGCAGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CACCAAAGAAAGTTCCTAAGCATAAAACCAAGAAACCAGAAAGTAGTTCAGATGAAGAAGAAGAATCTGAAAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGAAGCAAAAACATATTAAAAAGGAAAGAAAAAAAGCAAATGAAGAAAAAGATGGACCAACATCACCAAAGAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AAAAAAGCCCAAAGAAAGAAAACAAAAGAGATTGGCTGTAGGAGAACTAACTGAGAATGGCCTAACGTTAGAAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGTGGTTGCCTTCAGCTTGGATTACAGACACACTTCCCAGGAGATGTCCATTTGTGCCACAGATGGGTGATGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTTTATTATTTTCGACAAGGGCATGAAGCATATGTTGAAATGGCCCGGAAAAATAAAATTTATAGTATCAATCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAAAAAGCAGCCATGGCATAAGATGGAACTAAGGGAACAAGAACTAATGAAAATTGTTGGTATAAAGTATGAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGGGGTTGCCTACCCTTTGCTGCCTTAAACTTGCTTTTCTAGATCCTGATACTGGCAAACTGACCGGTGGATCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTTACCATGAAATACCATGATATGCCTGACGTCATAGATTTTCTAGTCTTGAGACAACAATTTGATGATGCAAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTATAGACGATGGAATATAGGTGACCGCTTCAGATCTGTCATAGATGATGCCTGGTGGTTTGGAACAATTGAAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTCAAGAGCCTCTTCAACCTGAGTACCCTGATAGTTTGTTTCAGTGTTATAATGTATGTTGGGACAATGGAGAT 3330
Query 1 ---------ATGAGTCCTTGGGATATGGAGCTTATACCTAATAATGCTGTATTTCCTGAAGAACTAGGTACCAG 65
||||||||||||||||||||..|.|||||||||||||||||.|||||.||||||||.||||||||
Sbjct 3331 ACAGAAAAGATGAGTCCTTGGGATATGGAATTAATACCTAATAATGCTGTCTTTCCAGAAGAACTGGGTACCAG 3404
Query 66 TGTTCCTTTAACTGATGGTGAGTGCAGATCACTAATCTATAAACCTCTTGATGGAGAATGGGGTACCAATCCCA 139
|||||||||||||||||.|||.||.||.||.|||||.||||||||||||||||||||||||||..|||||||||
Sbjct 3405 TGTTCCTTTAACTGATGTTGAATGTAGGTCGCTAATTTATAAACCTCTTGATGGAGAATGGGGAGCCAATCCCA 3478
Query 140 GGGATGAAGAATGTGAAAGAATTGTGGCAGGAATAAACCAGTTGATGACACTAGATATTGCCTCAGCATTTGTG 213
|||||||||||||||||||||||||.|.|||||||||.|||.|||||||||||||||||||.||.||||||||.
Sbjct 3479 GGGATGAAGAATGTGAAAGAATTGTTGGAGGAATAAATCAGCTGATGACACTAGATATTGCGTCTGCATTTGTT 3552
Query 214 GCCCCCGTGGATCTGCAAGCCTATCCCATGTATTGCACAGTAGTGGCATATCCAACGGATCTAAGTACAATTAA 287
|||||.|||||.||.|||||.|||||||||||||||||.||.|||||.||||||||||||||||||||||||||
Sbjct 3553 GCCCCTGTGGACCTTCAAGCTTATCCCATGTATTGCACTGTGGTGGCCTATCCAACGGATCTAAGTACAATTAA 3626
Query 288 ACAAAGACTGGAAAACAGGTTTTACAGGCGGGTTTCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATAATA 361
||||||||||||.|||||||||||||||||..||||.||.||||||||||||||||||||||||||.|||||||
Sbjct 3627 ACAAAGACTGGAGAACAGGTTTTACAGGCGCTTTTCATCACTAATGTGGGAAGTTCGATATATAGAACATAATA 3700
Query 362 CACGAACATTTAATGAGCCTGGAAGCCCTATTGTGAAATCTGCTAAATTCGTGACTGATCTTCTTCTACATTTT 435
||||||||||.||||||||.||||||||.||||||||||||||||||||.||||||||||||||.||.||||||
Sbjct 3701 CACGAACATTCAATGAGCCAGGAAGCCCAATTGTGAAATCTGCTAAATTTGTGACTGATCTTCTCCTGCATTTT 3774
Query 436 ATAAAGGATCAGACTTGTTATAACATAATTCCACTTTATAATTCAATGAAGAAGAAAGTTTTGTCTGATTCTGA 509
||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||
Sbjct 3775 ATAAAGGATCAGACTTGTTATAACATAATTCCACTTTACAACTCAATGAAGAAGAAAGTTTTGTCTGACTCTGA 3848
Query 510 GGATGAAGAGAAAGATGCTGATGTGCCAGGAACTTCTACTCGAAAAAGGAAGGACCATCAGCCTAGAAGAAGAT 583
|||.||||||||||||||||||||.|||||.||||||||..||||..|.|||||.|||||.|||||||||||.|
Sbjct 3849 GGAAGAAGAGAAAGATGCTGATGTTCCAGGGACTTCTACCAGAAAGCGCAAGGATCATCAACCTAGAAGAAGGT 3922
Query 584 TACGTAATAGAGCCCAGTCTTACGATATTCAAGCATGGAAGAAACAGTGTGAAGAATTGTTAAATCTCATATTT 657
||||.||.|||||.|||||||||||||||||.||||||||||||||.|||.|||||||..|.||||||||||||
Sbjct 3923 TACGCAACAGAGCTCAGTCTTACGATATTCAGGCATGGAAGAAACAATGTCAAGAATTACTGAATCTCATATTT 3996
Query 658 CAATGTGAAGATTCAGAGCCTTTCCGTCAGCCGGTAGATCTCCTTGAATATCCAGACTACAGAGACATCATTGA 731
|||||||||||.|||||.|||||.||.|||||.||.|||||.||||||||||||||||||||||||||||||||
Sbjct 3997 CAATGTGAAGACTCAGAACCTTTTCGACAGCCAGTGGATCTTCTTGAATATCCAGACTACAGAGACATCATTGA 4070
Query 732 CACTCCAATGGATTTTGCTACCGTTAGAGAAACTTTAGAGGCTGGGAATTATGAGTCACCAATGGAGTTATGTA 805
||||||||||||.|||||.||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||
Sbjct 4071 CACTCCAATGGACTTTGCCACTGTTAGAGAGACTTTAGAGGCTGGGAATTATGAGTCACCCATGGAGTTATGTA 4144
Query 806 AAGATGTCAGACTTATTTTCAGTAATTCCAAAGCATATACACCAAGCAAAAGATCAAGGATTTACAGCATGAGT 879
||||||||||.||.||||||||||||||.||||||||.|||||||||||.||||||||||||||||||||||||
Sbjct 4145 AAGATGTCAGGCTCATTTTCAGTAATTCTAAAGCATACACACCAAGCAAGAGATCAAGGATTTACAGCATGAGT 4218
Query 880 TTGCGCTTGTCTGCATTCTTTGAAGAACACATTAGTTCAGTTTTATCAGATTATAAATCTGCTCTTCGTTTTCA 953
||.|||.|||||||.||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 4219 TTACGCCTGTCTGCTTTCTTTGAAGAACATATTAGTTCAGTTTTGTCAGATTATAAATCTGCTCTTCGTTTTCA 4292
Query 954 TAAAAGAAATACCATAACCAAAAGGAGGAAGAAAAGAAACAGAAGCAGCTCTGTTTCCAGTAGTGCTGCATCAA 1027
|||||||||.|||||||.|||.|.|||||||||..|||||||.|||||.||..|.|||||.||||||||.||||
Sbjct 4293 TAAAAGAAACACCATAAGCAAGAAGAGGAAGAAGCGAAACAGGAGCAGTTCCCTGTCCAGCAGTGCTGCCTCAA 4366
Query 1028 GCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAATCAGAAAGCTCTACCTCTGCATTCTCTACACCT 1101
||||||||||||||||||||||||||||||||||||||||.||||||...|||||||||.|||||||.|.||||
Sbjct 4367 GCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAGTCAGAAGTATCTACCTCTCCATTCTCCATACCT 4440
Query 1102 ACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCGAAC 1175
|||.|||||.|||..||||||||.||||||||.||.||.||.||||||.|||||||.|||||||||||||||||
Sbjct 4441 ACAAGATCAGTACTACCAAGACATAATGCTGCGCAAATGAATGGTAAACCAGAATCCAGTTCTGTGGTTCGAAC 4514
Query 1176 CAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTTTTA 1249
.||.||||||||.||.|.||||||||||||||||||.|||||.||.|||||.||.|||||..||||..|||||.
Sbjct 4515 TAGGAGCAACCGTGTAGCTGTAGATCCAGTTGTCACCGAGCAGCCCTCTACATCATCAGCCACAAAAGCTTTTG 4588
Query 1250 TTACAAAAGCTAATGCATCTGCAATACCAGGGAAAACAATACTAGAGAATTCTGTGAAACATTCCAAAGCTTTG 1323
||.|||||.|||||.|||||||.||.|||||.|||.||||.||||||||||||||||.||||||||||||.|||
Sbjct 4589 TTTCAAAAACTAATACATCTGCCATGCCAGGAAAAGCAATGCTAGAGAATTCTGTGAGACATTCCAAAGCCTTG 4662
Query 1324 AATACTCTTTCCAGTCCTGGTCAATC----CAGTTTTAGTCATGGCACTAGGAATAATTCTGCAAAAGAAAACA 1393
|..||.||||||||.|||| ||| ||..||.||.||||..||.|.|||||||||||||||||||||||
Sbjct 4663 AGCACACTTTCCAGCCCTG----ATCCGCTCACATTCAGCCATGCTACAAAGAATAATTCTGCAAAAGAAAACA 4732
Query 1394 TGGAAAAGGAAAAGCCAGTCAAACGTAAAATGAAGTCATCTGTACTCCCAAAGGCGTCCACTCTTTCAAAGTCA 1467
||||||||||||||||.||||||||||||||||||||.|||||..|..||||.||.||..|.|||.||||||||
Sbjct 4733 TGGAAAAGGAAAAGCCTGTCAAACGTAAAATGAAGTCTTCTGTGTTTTCAAAAGCATCTCCACTTCCAAAGTCA 4806
Query 1468 TCAGCTGTCATTGAGCAAGGAGATTGTAAGAACAACGCTCTTGTACCAGGAACCATTCAAGTAAATGGCCATGG 1541
.|.||.|||||.|||||||||||.|||||||||||.|.||||.|||||||||||||||||||||||||||||||
Sbjct 4807 GCCGCAGTCATAGAGCAAGGAGAGTGTAAGAACAATGTTCTTATACCAGGAACCATTCAAGTAAATGGCCATGG 4880
Query 1542 AGGACAGCCATCAAAACTTGTGAAGAGGGGACCTGGAAGGAAACCTAAAGTAGAAGTTAATACCAATAGTGGTG 1615
||||||.|||||||||||.||||||||.||||||||.|||||.||.||.|||||||||||.||||..|||||||
Sbjct 4881 AGGACAACCATCAAAACTCGTGAAGAGAGGACCTGGGAGGAAGCCCAAGGTAGAAGTTAACACCAGCAGTGGTG 4954
Query 1616 AAATTATACACAAGAAAAGGGGTAGAAAGCCCAAAAAGCTACAGTATGCAAAGCCAGAAGATTTAGAGCAAAAT 1689
||.|.|.||||||||||||.||||||||||||||.||.||.||||.||||||||..|||.|.|..|||||||||
Sbjct 4955 AAGTGACACACAAGAAAAGAGGTAGAAAGCCCAAGAATCTGCAGTGTGCAAAGCAGGAAAACTCTGAGCAAAAT 5028
Query 1690 AATGTGCATCCCATCAGAGATGAAGTACTTCCTTCTTCAACATGCAATTTTCTTTCTGAAACTAATAATGTAAA 1763
||..|||||||||||||.|.|||.||.||||||||||||||||||||.||.|||||||||||||||..|||.||
Sbjct 5029 AACATGCATCCCATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAACTAATGCTGTCAA 5102
Query 1764 GGAAGATTTGTTACAGAAAAAGAATCGTGGAGGTAGGAAGCCCAAAAGGAAGATGAAGACACAAAAATTAGATG 1837
|||.|||||||||||||||||||.|||||||||.||.||.|||||||||||||||||.||.||.||..|||||.
Sbjct 5103 GGAGGATTTGTTACAGAAAAAGAGTCGTGGAGGCAGAAAACCCAAAAGGAAGATGAAAACTCACAACCTAGATT 5176
Query 1838 CAGATCTCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGGAGAAGTAACCGAAAAAAGATAGATGATCCTATAGAT 1911
||||.|||.||||.|||.|||.|||.|||||||||||||||||||||||.|||||.|.||||||||||||||||
Sbjct 5177 CAGAACTCATAGTTCCTACAAATGTTAAAGTGTTAAGGAGAAGTAACCGGAAAAAAACAGATGATCCTATAGAT 5250
Query 1912 GAGGAAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACCCCACATGAGAACTAGAAATCAAGGTCGAAGGACAGC 1985
||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||||||||
Sbjct 5251 GAGGAAGAGGAGTTTGAAGAACTCAAAGGCTCTGAGCCTCACATGAGAACTAGAAATCAGGGTCGAAGGACAGC 5324
Query 1986 TTTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTCGAAGACACCTCTTTAACTTTTGGAA 2059
|||||||||||||||||||||.||.||.||.||.||.||||||||||||||.||||||||.||.||.|||||||
Sbjct 5325 TTTCTATAATGAGGATGACTCGGAGGAAGAACAGAGACAGCTGTTGTTCGAGGACACCTCCTTGACATTTGGAA 5398
Query 2060 CTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAAGCTAATTTAATTGGTTGG 2121
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 5399 CTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAGGCTAATTTAATTGGTTGG 5460
