Nucleotide Global Alignment
Description
- Query:
- TRCN0000470046
- Subject:
- XM_006511565.3
- Aligned Length:
- 4957
- Identities:
- 1874
- Gaps:
- 2840
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGGTATGGAAAGGATCTGCCCTGGCTGCACTGCACTGTGGGAGGCCGCCAGAGTCTCCAGTTAACTACGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCCACCTAGCATTGGGTTCTGATGATTGTCTTGTGAAAATCTGGGCCACAGACGATGGAAGATTGCTAGCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTAAGAGGACATGCTGCTGAAATATCAGACATGGCTGTAAACTATGAGAATACTATGATAGCAGCTGGAAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGATAAAATGATTCGTGTCTGGTGTCTTCGAACCTGTGCACCTTTGGCTGTTCTTCAGGGACATAGTGCATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATTACATCACTACAGTTCTCACCATTGTGCAGTGGCTCAAAGAGATACCTGTCTTCTACAGGGGCGGACGGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTATTTGCTTTTGGCTTTGGGATGCTGGAACCCTTAAAATAAATCCAAGACCCACAAAATTTACAGAGCGTCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGCCTGGAGTGCAAATGATATGTTCTTCGTTCAGTGCTGGTGGGATGTTTTTGGCCACTGGAAGCACTGACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TATTATTAGAGTTTATTTTTTTGGATCAGGTCAGCCAGAAAAAATATCAGAATTGGAGTTTCATACTGACAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGACAGTATCCAGTTTTCCAACACTAGTAACAGGTTTGTGAGTGGTAGTCGTGATGGGACAGCACGAATTTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGTTTAAACGAAGGGAATGGAAAAGCATTTTGTTAGATATGGCTACTCGTCCAGCAGGCCAAAATCTTCAAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATAGAAGACAAAATCACAAAAATGAAAGTAACTATGGTAGCTTGGGATCGACATGACAACACAGTTATAACTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGTTAATAACATGACTCTGAAAGTTTGGAATTCTTATACTGGTCAACTGATACATGTTCTAATGGGTCATGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATGAGGTGTTTGTTCTTGAGCCACACCCATTTGATCCTAGAGTTCTCTTCTCTGCTGGTCATGATGGAAATGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GATAGTGTGGGATCTAGCAAGAGGAGTCAAAGTTCGATCTTATTTCAATATGATTGAAGGACAAGGACATGGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGTGTTTGACTGCAAATGCTCCCCTGATGGTCAGCACTTTGCATGTACAGACTCTCATGGACATCTTTTAATT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGGTTTTGGGTCCAGTAGCAAGTATGACAAGATAGCAGATCAGATGTTTTTTCACAGTGATTATCGGCCTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATCCGTGATGCGAACAATTTTGTATTAGATGAGCAGACGCAGCAGGCACCTCACCTCATGCCTCCCCCTTTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGTTGATGTTGATGGAAATCCTCATCCATCAAGGTACCAGCGATTGGTTCCTGGTCGGGAGAACTGCAGGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGCAGCTCATTCCTCAGATGGGAGTAACTTCTTCAGGATTGAACCAAGTTTTGAGCCAGCAAGCAAACCAGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TATTAGTCCTTTAGACAGCATGATTCAAAGACTGCAGCAGGAGCAGGACCTGAGGCGTTCGGGTGAAGCAGGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTAGTAATGCCAGCCGTGTGAACAGAGGCTCAGTAAGTTCTACCTCCGAAGTTCATTCACCACCAAATATAGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTAAGGCGCAGTGGCCAAATCGAAGGTGTACGGCAGATGCACAGCAATGCTCCGAGAAGTGAAATAGCCACAGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCGAGATCTTGTTGCTTGGAGTCGGAGGGTAGTAGTGCCTGAGCTCTCGGCTGGTGTGGCTAGTAGACAAGAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATGGAGAACTGCAAAGGGAGAAGAGGAAATAAAGAGTTATAGATCAGAAGAGAAAAGGAAACACTTAACTGTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCAAAAGAGAATAAAATACTTACTGTCTCAAAGAATCATGCTCATGAGCATTTCCTGGATCTTGGGGATTCTAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAAGCAGCAAGCGAATCAGCACAATTACCGTACAAGATCTGCACTGGAAGAAACACCCAGGCCCTTAGAGGAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAGAAAACGGAACTAGTTCTTCAGATGAAGGTGAAGTACTTGCTGTCAGTGGTGGGACTTCTGAGGAAGAGGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CGAGCATGGCACAGTGATGGCAGCTCCAGTGACTACTCCAGTGATTATTCTGATTGGACAGCAGATGCTGGAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAACTTGCAGCCACCAAAGAAAGTTCCTAAGCATAAAACCAAGAAACCAGAAAGTAGTTCAGATGAAGAAGAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATCTGAAAACCAGAAGCAAAAACATATTAAAAAGGAAAGAAAAAAAGCAAATGAAGAAAAAGATGGACCAACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCACCAAAGAAAAAAAAGCCCAAAGAAAGAAAACAAAAGAGATTGGCTGTAGGAGAACTAACTGAGAATGGCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACGTTAGAAGAGTGGTTGCCTTCAGCTTGGATTACAGACACACTTCCCAGGAGATGTCCATTTGTGCCACAGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGGTGATGAGGTTTATTATTTTCGACAAGGGCATGAAGCATATGTTGAAATGGCCCGGAAAAATAAAATTTAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGTATCAATCCTAAAAAGCAGCCATGGCATAAGATGGAACTAAGGGAACAAGAACTAATGAAAATTGTTGGTAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAAGTATGAAGTGGGGTTGCCTACCCTTTGCTGCCTTAAACTTGCTTTTCTAGATCCTGATACTGGCAAACTGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCGGTGGATCATTTACCATGAAATACCATGATATGCCTGACGTCATAGATTTTCTAGTCTTGAGACAACAATTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GATGATGCAAAGTATAGACGATGGAATATAGGTGACCGCTTCAGATCTGTCATAGATGATGCCTGGTGGTTTGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AACAATTGAAAGTCAAGAGCCTCTTCAACCTGAGTACCCTGATAGTTTGTTTCAGTGTTATAATGTATGTTGGG 2812
Query 1 --------------------ATGAGTCCTTGGGATATGGAGCTTATACCTAATAATGCTGTATTTCCTGAAGAA 54
||||||||||||||||||||..|.|||||||||||||||||.|||||.||||||
Sbjct 2813 ACAATGGAGATACAGAAAAGATGAGTCCTTGGGATATGGAATTAATACCTAATAATGCTGTCTTTCCAGAAGAA 2886
Query 55 CTAGGTACCAGTGTTCCTTTAACTGATGGTGAGTGCAGATCACTAATCTATAAACCTCTTGATGGAGAATGGGG 128
||.|||||||||||||||||||||||||.|||.||.||.||.|||||.||||||||||||||||||||||||||
Sbjct 2887 CTGGGTACCAGTGTTCCTTTAACTGATGTTGAATGTAGGTCGCTAATTTATAAACCTCTTGATGGAGAATGGGG 2960
Query 129 TACCAATCCCAGGGATGAAGAATGTGAAAGAATTGTGGCAGGAATAAACCAGTTGATGACACTAGATATTGCCT 202
..||||||||||||||||||||||||||||||||||.|.|||||||||.|||.|||||||||||||||||||.|
Sbjct 2961 AGCCAATCCCAGGGATGAAGAATGTGAAAGAATTGTTGGAGGAATAAATCAGCTGATGACACTAGATATTGCGT 3034
Query 203 CAGCATTTGTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTATTGCACAGTAGTGGCATATCCAACGGATCTA 276
|.||||||||.|||||.|||||.||.|||||.|||||||||||||||||.||.|||||.|||||||||||||||
Sbjct 3035 CTGCATTTGTTGCCCCTGTGGACCTTCAAGCTTATCCCATGTATTGCACTGTGGTGGCCTATCCAACGGATCTA 3108
Query 277 AGTACAATTAAACAAAGACTGGAAAACAGGTTTTACAGGCGGGTTTCTTCCCTAATGTGGGAAGTTCGATATAT 350
|||||||||||||||||||||||.|||||||||||||||||..||||.||.|||||||||||||||||||||||
Sbjct 3109 AGTACAATTAAACAAAGACTGGAGAACAGGTTTTACAGGCGCTTTTCATCACTAATGTGGGAAGTTCGATATAT 3182
Query 351 AGAGCATAATACACGAACATTTAATGAGCCTGGAAGCCCTATTGTGAAATCTGCTAAATTCGTGACTGATCTTC 424
|||.|||||||||||||||||.||||||||.||||||||.||||||||||||||||||||.|||||||||||||
Sbjct 3183 AGAACATAATACACGAACATTCAATGAGCCAGGAAGCCCAATTGTGAAATCTGCTAAATTTGTGACTGATCTTC 3256
Query 425 TTCTACATTTTATAAAGGATCAGACTTGTTATAACATAATTCCACTTTATAATTCAATGAAGAAGAAAGTTTTG 498
|.||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||
Sbjct 3257 TCCTGCATTTTATAAAGGATCAGACTTGTTATAACATAATTCCACTTTACAACTCAATGAAGAAGAAAGTTTTG 3330
Query 499 TCTGATTCTGAGGATGAAGAGAAAGATGCTGATGTGCCAGGAACTTCTACTCGAAAAAGGAAGGACCATCAGCC 572
|||||.||||||||.||||||||||||||||||||.|||||.||||||||..||||..|.|||||.|||||.||
Sbjct 3331 TCTGACTCTGAGGAAGAAGAGAAAGATGCTGATGTTCCAGGGACTTCTACCAGAAAGCGCAAGGATCATCAACC 3404
Query 573 TAGAAGAAGATTACGTAATAGAGCCCAGTCTTACGATATTCAAGCATGGAAGAAACAGTGTGAAGAATTGTTAA 646
|||||||||.|||||.||.|||||.|||||||||||||||||.||||||||||||||.|||.|||||||..|.|
Sbjct 3405 TAGAAGAAGGTTACGCAACAGAGCTCAGTCTTACGATATTCAGGCATGGAAGAAACAATGTCAAGAATTACTGA 3478
Query 647 ATCTCATATTTCAATGTGAAGATTCAGAGCCTTTCCGTCAGCCGGTAGATCTCCTTGAATATCCAGACTACAGA 720
||||||||||||||||||||||.|||||.|||||.||.|||||.||.|||||.|||||||||||||||||||||
Sbjct 3479 ATCTCATATTTCAATGTGAAGACTCAGAACCTTTTCGACAGCCAGTGGATCTTCTTGAATATCCAGACTACAGA 3552
Query 721 GACATCATTGACACTCCAATGGATTTTGCTACCGTTAGAGAAACTTTAGAGGCTGGGAATTATGAGTCACCAAT 794
|||||||||||||||||||||||.|||||.||.||||||||.|||||||||||||||||||||||||||||.||
Sbjct 3553 GACATCATTGACACTCCAATGGACTTTGCCACTGTTAGAGAGACTTTAGAGGCTGGGAATTATGAGTCACCCAT 3626
Query 795 GGAGTTATGTAAAGATGTCAGACTTATTTTCAGTAATTCCAAAGCATATACACCAAGCAAAAGATCAAGGATTT 868
|||||||||||||||||||||.||.||||||||||||||.||||||||.|||||||||||.|||||||||||||
Sbjct 3627 GGAGTTATGTAAAGATGTCAGGCTCATTTTCAGTAATTCTAAAGCATACACACCAAGCAAGAGATCAAGGATTT 3700
Query 869 ACAGCATGAGTTTGCGCTTGTCTGCATTCTTTGAAGAACACATTAGTTCAGTTTTATCAGATTATAAATCTGCT 942
|||||||||||||.|||.|||||||.||||||||||||||.||||||||||||||.||||||||||||||||||
Sbjct 3701 ACAGCATGAGTTTACGCCTGTCTGCTTTCTTTGAAGAACATATTAGTTCAGTTTTGTCAGATTATAAATCTGCT 3774
Query 943 CTTCGTTTTCATAAAAGAAATACCATAACCAAAAGGAGGAAGAAAAGAAACAGAAGCAGCTCTGTTTCCAGTAG 1016
||||||||||||||||||||.|||||||.|||.|.|||||||||..|||||||.|||||.||..|.|||||.||
Sbjct 3775 CTTCGTTTTCATAAAAGAAACACCATAAGCAAGAAGAGGAAGAAGCGAAACAGGAGCAGTTCCCTGTCCAGCAG 3848
Query 1017 TGCTGCATCAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAATCAGAAAGCTCTACCTCTGCAT 1090
||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||...|||||||||.|||
Sbjct 3849 TGCTGCCTCAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAGTCAGAAGTATCTACCTCTCCAT 3922
Query 1091 TCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGTAAAACAGAATCTAGTTCT 1164
||||.|.|||||||.|||||.|||..||||||||.||||||||.||.||.||.||||||.|||||||.||||||
Sbjct 3923 TCTCCATACCTACAAGATCAGTACTACCAAGACATAATGCTGCGCAAATGAATGGTAAACCAGAATCCAGTTCT 3996
Query 1165 GTGGTTCGAACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTCTTCAGCTGC 1238
|||||||||||.||.||||||||.||.|.||||||||||||||||||.|||||.||.|||||.||.|||||..|
Sbjct 3997 GTGGTTCGAACTAGGAGCAACCGTGTAGCTGTAGATCCAGTTGTCACCGAGCAGCCCTCTACATCATCAGCCAC 4070
Query 1239 AAAGACTTTTATTACAAAAGCTAATGCATCTGCAATACCAGGGAAAACAATACTAGAGAATTCTGTGAAACATT 1312
|||..|||||.||.|||||.|||||.|||||||.||.|||||.|||.||||.||||||||||||||||.|||||
Sbjct 4071 AAAAGCTTTTGTTTCAAAAACTAATACATCTGCCATGCCAGGAAAAGCAATGCTAGAGAATTCTGTGAGACATT 4144
Query 1313 CCAAAGCTTTGAATACTCTTTCCAGTCCTGGTCAATC----CAGTTTTAGTCATGGCACTAGGAATAATTCTGC 1382
|||||||.||||..||.||||||||.|||| ||| ||..||.||.||||..||.|.||||||||||||
Sbjct 4145 CCAAAGCCTTGAGCACACTTTCCAGCCCTG----ATCCGCTCACATTCAGCCATGCTACAAAGAATAATTCTGC 4214
Query 1383 AAAAGAAAACATGGAAAAGGAAAAGCCAGTCAAACGTAAAATGAAGTCATCTGTACTCCCAAAGGCGTCCACTC 1456
|||||||||||||||||||||||||||.||||||||||||||||||||.|||||..|..||||.||.||..|.|
Sbjct 4215 AAAAGAAAACATGGAAAAGGAAAAGCCTGTCAAACGTAAAATGAAGTCTTCTGTGTTTTCAAAAGCATCTCCAC 4288
Query 1457 TTTCAAAGTCATCAGCTGTCATTGAGCAAGGAGATTGTAAGAACAACGCTCTTGTACCAGGAACCATTCAAGTA 1530
||.||||||||.|.||.|||||.|||||||||||.|||||||||||.|.||||.||||||||||||||||||||
Sbjct 4289 TTCCAAAGTCAGCCGCAGTCATAGAGCAAGGAGAGTGTAAGAACAATGTTCTTATACCAGGAACCATTCAAGTA 4362
Query 1531 AATGGCCATGGAGGACAGCCATCAAAACTTGTGAAGAGGGGACCTGGAAGGAAACCTAAAGTAGAAGTTAATAC 1604
|||||||||||||||||.|||||||||||.||||||||.||||||||.|||||.||.||.|||||||||||.||
Sbjct 4363 AATGGCCATGGAGGACAACCATCAAAACTCGTGAAGAGAGGACCTGGGAGGAAGCCCAAGGTAGAAGTTAACAC 4436
Query 1605 CAATAGTGGTGAAATTATACACAAGAAAAGGGGTAGAAAGCCCAAAAAGCTACAGTATGCAAAGCCAGAAGATT 1678
||..|||||||||.|.|.||||||||||||.||||||||||||||.||.||.||||.||||||||..|||.|.|
Sbjct 4437 CAGCAGTGGTGAAGTGACACACAAGAAAAGAGGTAGAAAGCCCAAGAATCTGCAGTGTGCAAAGCAGGAAAACT 4510
Query 1679 TAGAGCAAAATAATGTGCATCCCATCAGAGATGAAGTACTTCCTTCTTCAACATGCAATTTTCTTTCTGAAACT 1752
..|||||||||||..|||||||||||||.|.|||.||.||||||||||||||||||||.||.||||||||||||
Sbjct 4511 CTGAGCAAAATAACATGCATCCCATCAGGGCTGACGTGCTTCCTTCTTCAACATGCAACTTCCTTTCTGAAACT 4584
Query 1753 AATAATGTAAAGGAAGATTTGTTACAGAAAAAGAATCGTGGAGGTAGGAAGCCCAAAAGGAAGATGAAGACACA 1826
|||..|||.|||||.|||||||||||||||||||.|||||||||.||.||.|||||||||||||||||.||.||
Sbjct 4585 AATGCTGTCAAGGAGGATTTGTTACAGAAAAAGAGTCGTGGAGGCAGAAAACCCAAAAGGAAGATGAAAACTCA 4658
Query 1827 AAAATTAGATGCAGATCTCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGGAGAAGTAACCGAAAAAAGATAGATG 1900
.||..|||||.||||.|||.||||.|||.|||.|||.|||||||||||||||||||||||.|||||.|.|||||
Sbjct 4659 CAACCTAGATTCAGAACTCATAGTTCCTACAAATGTTAAAGTGTTAAGGAGAAGTAACCGGAAAAAAACAGATG 4732
Query 1901 ATCCTATAGATGAGGAAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACCCCACATGAGAACTAGAAATCAAGGT 1974
|||||||||||||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||.|||
Sbjct 4733 ATCCTATAGATGAGGAAGAGGAGTTTGAAGAACTCAAAGGCTCTGAGCCTCACATGAGAACTAGAAATCAGGGT 4806
Query 1975 CGAAGGACAGCTTTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTCGAAGACACCTCTTT 2048
||||||||||||||||||||||||||||||||.||.||.||.||.||.||||||||||||||.||||||||.||
Sbjct 4807 CGAAGGACAGCTTTCTATAATGAGGATGACTCGGAGGAAGAACAGAGACAGCTGTTGTTCGAGGACACCTCCTT 4880
Query 2049 AACTTTTGGAACTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAAGCTAATTTAATTGGTTGG 2121
.||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 4881 GACATTTGGAACTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAGGCTAATTTAATTGGTTGG 4953
