Nucleotide Global Alignment
Description
- Query:
- TRCN0000470067
- Subject:
- NM_172544.3
- Aligned Length:
- 3352
- Identities:
- 1118
- Gaps:
- 2108
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGGCTCAGATGACTTCTTCTATGTTGGTGGAAGCCCAAGTACCGCAGACTTGCCAGGTTCACCTGTGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGAATAATGACATCCGTCTAGAGCTGTCTCGCTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGATTGGAGACACCAAGATGAAAATCTATGGTGAAGTTGTGTTCAAGTGTGAGAACGTGGCCACACTGGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACACCAAACGTATGGGCTCCATTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGACTTTCGCACCACTGAGCCCAACGGCCTGATTCTCTTCACTCACGGGAAGCCTCAAGAAAGGAAAGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCGGAGCCAAAAGAACACAAAAGTTGACTTCTTTGCTGTGGAACTTCTTGATGGCAACCTGTATTTGCTGCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACATGGGCTCTGGCACCATCAAAGTGAAGGCCACTCAGAAGAAGGCCAATGATGGGGAATGGTACCACGTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TATTCAGCGTGATGGCAGATCAGGTACCATATCTGTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGAAATTCTCGACCTGGAGGGGGACATGTATCTGGGCGGGCTGCCAGAGAACCGAGCTGGCCTCATCCTCCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACGGAGCTCTGGACCGCCATGCTCAACTACGGTTACGTGGGCTGCATCCGCGACCTGTTCATCGATGGGCGCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAGAACATCCGGCAGCTGGCGGAGATGCAGAACGCAGCAGGCGTCAAGTCCTCCTGTTCACGCATGAGCGCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCAGTGTGACAGCTACCCCTGCAAGAACAACGCGGTGTGCAAGGACGGCTGGAACCGCTTCATCTGCGACTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTGGCACCGGCTACTGGGGGAGAACCTGCGAAAGAGAGGCATCTATCCTGAGCTATGACGGCAGCATGTACAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGGTCATCATGCCCATGGTGATGCACACGGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCACAGCGAGCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGGGCTACTGGTAGCCACAACCTCCAGGGATTCTGCAGATACACTGCGTCTAGAGTTGGATGGTGGGCGTGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGCTCATGGTTAACTTAGACTGTATCAGGATAAACTGTAACTCCAGCAAAGGACCTGAGACCCTGTATGCAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGAAGCTCAATGACAATGAGTGGCACACCGTCCGGGTAGTGCGGAGAGGAAAAAGCCTTAAGCTAACAGTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGATGATGTGGCTGAGGGGACAATGGTGGGCGACCACACCCGCCTGGAATTCCACAATATTGAAACTGGTATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGACTGAGAAGCGTTACATCTCTGTGGTCCCCTCCAGTTTCATTGGCCATCTACAGAGCCTCATGTTCAATGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTACTGTACATTGATTTGTGCAAAAATGGCGACATCGACTACTGTGAACTGAAGGCTCGCTTTGGACTGAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACATCATCGCCGACCCTGTCACTTTTAAGACCAAGAGCAGCTACCTGACCCTCGCCACCCTACAGGCTTACACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCATGCACCTCTTCTTCCAGTTCAAGACCACTTCAGCTGATGGCTTCATTCTCTTCAATAGCGGAGATGGCAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGATTTTATTGCAGTTGAGCTGGTCAAGGGGTACATACACTATGTGTTTGATCTCGGCAATGGTCCCAATGTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAACGTGGTCATCACCAGGGACAGCAGTAAC 1776
Query 1 ATGCAC---CTGA-----GAATCCACGCGAG---------------ACGGAGCC------CT------------ 33
|..||| |||| ||..|||.|..|| |.||.||| ||
Sbjct 1777 ACCCACAGTCTGAAGGTGGACACCAAGGTAGTCACTCAGGTCATCAATGGTGCCAAAAATCTGGATTTGAAAGG 1850
Query 34 ---CCTC------GCCGGC--------CGGCCTGGAC--------------GCTTGGGATCTGGTTCCTGTTCT 76
|||| ||.||| .|||.||.|| ||||| ||| || ||.
Sbjct 1851 TGACCTCTATATGGCTGGCTTAGCCCAGGGCATGTACAGCAACCTTCCCAAGCTTG-----TGG--CC---TCC 1914
Query 77 GGGGATGTATCGTCAG-----------CTCTGTATGGAGTTCTTCTAATGTA--GCTTCCT--CCTCCTCCAC- 134
.||||||.|| .|||| ||||| ||||.|| .||||.| .||.||| .|||.||.||
Sbjct 1915 AGGGATGGAT-TTCAGGGCTGCCTGGCCTCTG--TGGACTT----GAATGGACGCCTGCCTGATCTCATCAACG 1981
Query 135 ---CTCTTCC---------------TCG----------------------------------CCGG---GGTCT 153
||| ||| ||| ||.| ||.|.
Sbjct 1982 ATGCTC-TCCACAGGAGTGGACAGATCGAGCGAGGCTGTGAAGTTGCGTTGACCAAAGCTGACCTGCAAGGACC 2054
Query 154 CA-------CTCTCAGCACGA-----GCACCA---------TTTCCATGGCAGC-------AAGCATCACTCAG 199
|| ||.||||.|.|| ||.||| |||.||| ||||| |.|..|||| |.|
Sbjct 2055 CAGTACAACCTGTCAGGAGGATTCATGCGCCAACCAGGGAGTTTGCAT-GCAGCAGTGGGAAGGTTTCAC-CTG 2126
Query 200 TGCCTATTTCTATCTATCGTTCC-------CCTGTTTCCCTTCGAGGAGGAC----------ACGCTGGCGCTA 256
||.|| |.||| |.|.|| || ||| .|| ||.||||.||.|
Sbjct 2127 TGACT-------------GCTCCATGACATCATATT---CT----GGA-AACCAGTGCAATGACCCTGGTGCAA 2179
Query 257 CGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCT 330
|.|||||||||||||||||.|||||.||.||||||||.|||||||||||.||||||||.||||||||.||.|||
Sbjct 2180 CATACATCTTTGGGAAAAGCGGTGGCCTCATCCTCTATACCTGGCCAGCAAATGACAGACCCAGCACACGCTCT 2253
Query 331 GACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACT 404
|||||.||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.||.||.|||||
Sbjct 2254 GACCGTCTCGCCGTGGGCTTCAGCACTACTGTGAAGGATGGTATCTTAGTACGCATTGACAGCGCCCCTGGACT 2327
Query 405 TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCT 478
|||.||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||
Sbjct 2328 TGGCGACTTCCTCCAGCTTCACATAGAACAAGGGAAAATTGGAGTTGTCTTCAATATTGGCACAGTTGACATCT 2401
Query 479 CCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAAC 552
||||||||||.||||||||.|||||.|||||.|||||||||||.||.||.||||||||||||||.||.||.||.
Sbjct 2402 CCATCAAAGAAGAGAGAACTCCTGTCAATGATGGCAAATACCACGTTGTGCGCTTCACCAGGAATGGGGGAAAT 2475
Query 553 GCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTAC--------------------------- 599
||.||.||.||||||||||||||||||||||||||.||.||||||||
Sbjct 2476 GCTACACTTCAGGTGGACAACTGGCCAGTGAATGAGCACTATCCTACAGGCAACACTGATAATGAACGCCTCCA 2549
Query 600 ---------------------------------------------------------------AGGCCGGCAGT 610
||||||||||.
Sbjct 2550 AATGGTAAAACAGAAAATCCCCTTCAAATATAACCGGCCCGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCAGC 2623
Query 611 TAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTC 684
||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||.|||||||||||.||||||
Sbjct 2624 TAACCATCTTCAACACCCAGGCGCAAATAGCCATCGGAGGAAAGGACAAAGGACGTCTCTTCCAAGGTCAACTC 2697
Query 685 TCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGG 758
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 2698 TCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCAGCTGAGAACAACCCTAATATTAAAATCAATGG 2771
Query 759 AAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGT 832
||||||.|||||.||.|||||||||||||||.|.|..||||||||||||||.||.|||||||||||.|||||||
Sbjct 2772 AAGTGTCCGGCTAGTGGGAGAAGTCCCATCAGTCTCAGGAACAACACAGACAACGTCCATGCCACCTGAAATGT 2845
Query 833 CTACTACTGTCATGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATT 906
||||.||.||||||||||||||.||.||.|||||.||.|||||.|||||.|||||.||||||||||||||||||
Sbjct 2846 CTACCACCGTCATGGAAACCACCACCACCATGGCTACGACCACCACCCGAAAGAACCGCTCTACAGCCAGCATT 2919
Query 907 CAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCC 980
|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 2920 CAGCCCACGTCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTCGAATGTGAACC 2993
Query 981 GAGTACAGGTAGGTCAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGG 1054
.|||| |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 2994 AAGTA---------CAGCAAACCCCACGGAGCCAGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGG 3058
Query 1055 AGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTAC 1128
||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3059 AGTCCAGCAGTACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTAC 3132
Query 1129 GCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTC 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 3133 GCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGAGGAACTACATCAGCAACTC 3206
Query 1203 CGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAG--AGCTCGAAGAGCGGCCACAAGAAACAGAAAAA 1274
.||||||||||||||||||||||||||||||||||| || |||||.|||||||||||.||||||||||||||
Sbjct 3207 GGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCA--AGCCAGCTCCAAGAGCGGCCATAAGAAACAGAAAAA 3278
Query 1275 CAAGGACAGGGAGCATTACGTG 1296
||||||||.||||.||||.|||
Sbjct 3279 CAAGGACAAGGAGTATTATGTG 3300
