Nucleotide Global Alignment

Description

Query:
TRCN0000470067
Subject:
XM_006515560.2
Aligned Length:
4391
Identities:
1118
Gaps:
3148

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCTTTACCCTCCACTCAGTTTTCTTCACCTTGAAGGTGAGCATCTTTCTGGGCTCCCTGGTGGGGCTTTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGGGTCTGGAGTTCATGGGCCTTCCTAACCAGTGGGCCCGCTACCTGCGTTGGGATGCAAGCACGCGCAGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACCTGAGCTTCCAGTTCAAGACCAATGTTTCCACTGGGCTGCTCCTGTATTTGGATGATGGTGGTGTCTGTGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCCTCTGTCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTTAGCATGGACTGTGCCGAGACCACTGTGCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCCAACAAGCAGGTGAACGACAGCAGTTGGCACTTCCTCATGGTGAGCCGTGATCGTGTGCGCACTGGGCTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGATTGATGGTGAGGGCCAGTCTGGAGAGCTACGGCCCCAGCGGCCTTATATGGATGTGGTCAGTGATTTGTTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCGGTGGCGTCCCCGCTGACATTCGACCTTCTGCCCTGACCCTCGATGGAGTACAGAGCATGCCTGGCTTTAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGGATTAATGCTGGATCTCAAGTATGGCAACTCGGAACCTCGGCTTCTGGGGAGCCAGAGCGTCCAGTTAGAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGAGGGACCCTGTGGCGAGCGTCCCTGTGAAAATGGTGGGATCTGCTTCCTCTTGGATGGTCATCCCACCTGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GACTGTTCTACCACTGGCTATGGTGGCACACTCTGCTCAGAAGATGTCAGTCAAGGTCCAGGCCTCTCCCATCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATGATGAGTGAACAAGGTAGAAGTAAAGCACGAGAGGAGAACGTGGCCACCTTCCGAGGCTCAGAGTATCTGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCTATGACCTGTCCCAGAACCCCATCCAGAGCAGCAGCGACGAAATCACCCTTTCCTTTAAGACCTGGCAACGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AATGGGCTCATCCTCCACACTGGCAAGTCGGCCGACTATGTTAACCTGGCTCTGAAGGATGGTGCGGTCTCCTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGTCATTAACCTGGGGTCCGGGGCCTTTGAGGCCATTGTGGAGCCAGTGAATGGGAAATTCAACGACAACGCCT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGCATGATGTCAAAGTGACACGCAATCTTCGGCAGCACTCAGGCATCGGACACGCTATGGTGACAATCTCTGTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GATGGCATCCTAACCACAACGGGCTACACTCAAGAGGACTACACCATGCTGGGCTCAGATGACTTCTTCTATGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGGTGGAAGCCCAAGTACCGCAGACTTGCCAGGTTCACCTGTGAGCAACAACTTCATGGGCTGCCTTAAAGAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTGTTTATAAGAATAATGACATCCGTCTAGAGCTGTCTCGCTTGGCCCGGATTGGAGACACCAAGATGAAAATC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TATGGTGAAGTTGTGTTCAAGTGTGAGAACGTGGCCACACTGGATCCCATCAACTTTGAGACCCCAGAGGCTTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CATCAGCTTGCCCAAGTGGAACACCAAACGTATGGGCTCCATTTCCTTTGACTTTCGCACCACTGAGCCCAACG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GCCTGATTCTCTTCACTCACGGGAAGCCTCAAGAAAGGAAAGATGTCCGGAGCCAAAAGAACACAAAAGTTGAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTCTTTGCTGTGGAACTTCTTGATGGCAACCTGTATTTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGCCACTCAGAAGAAGGCCAATGATGGGGAATGGTACCACGTGGATATTCAGCGTGATGGCAGATCAGGTACCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TATCTGTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGAGTGAAATTCTCGACCTGGAGGGGGACATG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TATCTGGGCGGGCTGCCAGAGAACCGAGCTGGCCTCATCCTCCCCACGGAGCTCTGGACCGCCATGCTCAACTA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CGGTTACGTGGGCTGCATCCGCGACCTGTTCATCGATGGGCGCAGCAAGAACATCCGGCAGCTGGCGGAGATGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGAACGCAGCAGGCGTCAAGTCCTCCTGTTCACGCATGAGCGCCAAGCAGTGTGACAGCTACCCCTGCAAGAAC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AACGCGGTGTGCAAGGACGGCTGGAACCGCTTCATCTGCGACTGCACTGGCACCGGCTACTGGGGGAGAACCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CGAAAGAGAGGCATCTATCCTGAGCTATGACGGCAGCATGTACATGAAGGTCATCATGCCCATGGTGATGCACA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CGGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCACAGCGAGCCTATGGGCTACTGGTAGCCACAACCTCCAGG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GATTCTGCAGATACACTGCGTCTAGAGTTGGATGGTGGGCGTGTCAAGCTCATGGTTAACTTAGACTGTATCAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GATAAACTGTAACTCCAGCAAAGGACCTGAGACCCTGTATGCAGGGCAGAAGCTCAATGACAATGAGTGGCACA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CCGTCCGGGTAGTGCGGAGAGGAAAAAGCCTTAAGCTAACAGTGGATGATGATGTGGCTGAGGGGACAATGGTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGCGACCACACCCGCCTGGAATTCCACAATATTGAAACTGGTATCATGACTGAGAAGCGTTACATCTCTGTGGT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCCCTCCAGTTTCATTGGCCATCTACAGAGCCTCATGTTCAATGGCTTACTGTACATTGATTTGTGCAAAAATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GCGACATCGACTACTGTGAACTGAAGGCTCGCTTTGGACTGAGAAACATCATCGCCGACCCTGTCACTTTTAAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACCAAGAGCAGCTACCTGACCCTCGCCACCCTACAGGCTTACACCTCCATGCACCTCTTCTTCCAGTTCAAGAC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CACTTCAGCTGATGGCTTCATTCTCTTCAATAGCGGAGATGGCAATGATTTTATTGCAGTTGAGCTGGTCAAGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GGTACATACACTATGTGTTTGATCTCGGCAATGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAAT  2886

Query    1  ---------------------------------------------ATGCAC---CTGA-----GAATCCACGCG  21
                                                         |..|||   ||||     ||..|||.|..
Sbjct 2887  GACAACCAGTGGCACAACGTGGTCATCACCAGGGACAGCAGTAACACCCACAGTCTGAAGGTGGACACCAAGGT  2960

Query   22  AG---------------ACGGAGCC------CT---------------CCTC------GCCGGC--------CG  45
            ||               |.||.|||      ||               ||||      ||.|||        .|
Sbjct 2961  AGTCACTCAGGTCATCAATGGTGCCAAAAATCTGGATTTGAAAGGTGACCTCTATATGGCTGGCTTAGCCCAGG  3034

Query   46  GCCTGGAC--------------GCTTGGGATCTGGTTCCTGTTCTGGGGATGTATCGTCAG-----------CT  94
            ||.||.||              |||||     |||  ||   ||..||||||.|| .||||           ||
Sbjct 3035  GCATGTACAGCAACCTTCCCAAGCTTG-----TGG--CC---TCCAGGGATGGAT-TTCAGGGCTGCCTGGCCT  3097

Query   95  CTGTATGGAGTTCTTCTAATGTA--GCTTCCT--CCTCCTCCAC----CTCTTCC---------------TCG-  144
            |||  ||||.||    .||||.|  .||.|||  .|||.||.||    ||| |||               ||| 
Sbjct 3098  CTG--TGGACTT----GAATGGACGCCTGCCTGATCTCATCAACGATGCTC-TCCACAGGAGTGGACAGATCGA  3164

Query  145  CCGGGGTCT----------CA-------CTCTCAGCACGA-----GCACCA---------TTTCCATGGCAGC-  186
            .||.|| ||          ||       ||.||||.|.||     ||.|||         |||.||| ||||| 
Sbjct 3165  GCGAGG-CTGTGAAGGACCCAGTACAACCTGTCAGGAGGATTCATGCGCCAACCAGGGAGTTTGCAT-GCAGCA  3236

Query  187  ------AAGCATCACTCAGTGCCTATTTCTATCTATCGTTCC-------CCTGTTTCCCTTCGAGGAGGAC---  244
                  |.|..|||| |.|||.||             |.|||       |.|.||   ||    ||| .||   
Sbjct 3237  GTGGGAAGGTTTCAC-CTGTGACT-------------GCTCCATGACATCATATT---CT----GGA-AACCAG  3288

Query  245  -------ACGCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGA  311
                   ||.||||.||.||.|||||||||||||||||.|||||.||.||||||||.|||||||||||.|||||
Sbjct 3289  TGCAATGACCCTGGTGCAACATACATCTTTGGGAAAAGCGGTGGCCTCATCCTCTATACCTGGCCAGCAAATGA  3362

Query  312  CAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCA  385
            |||.||||||||.||.||||||||.||.|||||||||||||||||.||||||||||||||.|||||.||.||||
Sbjct 3363  CAGACCCAGCACACGCTCTGACCGTCTCGCCGTGGGCTTCAGCACTACTGTGAAGGATGGTATCTTAGTACGCA  3436

Query  386  TCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCAAC  459
            |.|||||.||.||.||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||.
Sbjct 3437  TTGACAGCGCCCCTGGACTTGGCGACTTCCTCCAGCTTCACATAGAACAAGGGAAAATTGGAGTTGTCTTCAAT  3510

Query  460  ATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTT  533
            |||||||||||||||||||||||||||||.||||||||.|||||.|||||.|||||||||||.||.||.|||||
Sbjct 3511  ATTGGCACAGTTGACATCTCCATCAAAGAAGAGAGAACTCCTGTCAATGATGGCAAATACCACGTTGTGCGCTT  3584

Query  534  CACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCCGGC  607
            |||||||||.||.||.||.||.||.||.||||||||||||||||||||||||||.||.||||||||||||||||
Sbjct 3585  CACCAGGAATGGGGGAAATGCTACACTTCAGGTGGACAACTGGCCAGTGAATGAGCACTATCCTACAGGCCGGC  3658

Query  608  AGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAA  681
            ||.||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||.|||||||||||.|||
Sbjct 3659  AGCTAACCATCTTCAACACCCAGGCGCAAATAGCCATCGGAGGAAAGGACAAAGGACGTCTCTTCCAAGGTCAA  3732

Query  682  CTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAA  755
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct 3733  CTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCAGCTGAGAACAACCCTAATATTAAAATCAA  3806

Query  756  TGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAA  829
            |||||||||.|||||.||.|||||||||||||||.|.|..||||||||||||||.||.|||||||||||.||||
Sbjct 3807  TGGAAGTGTCCGGCTAGTGGGAGAAGTCCCATCAGTCTCAGGAACAACACAGACAACGTCCATGCCACCTGAAA  3880

Query  830  TGTCTACTACTGTCATGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGC  903
            |||||||.||.||||||||||||||.||.||.|||||.||.|||||.|||||.|||||.|||||||||||||||
Sbjct 3881  TGTCTACCACCGTCATGGAAACCACCACCACCATGGCTACGACCACCACCCGAAAGAACCGCTCTACAGCCAGC  3954

Query  904  ATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGA  977
            ||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 3955  ATTCAGCCCACGTCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTCGAATGTGA  4028

Query  978  GCCGAGTACAGGTAGGTCAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCC  1051
            .||.||||         |||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 4029  ACCAAGTA---------CAGCAAACCCCACGGAGCCAGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCC  4093

Query 1052  GGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTG  1125
            |||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4094  GGGAGTCCAGCAGTACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTG  4167

Query 1126  TACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAA  1199
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 4168  TACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGAGGAACTACATCAGCAA  4241

Query 1200  CTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAG--AGCTCGAAGAGCGGCCACAAGAAACAGAA  1271
            |||.|||||||||||||||||||||||||||||||||||  ||  |||||.|||||||||||.|||||||||||
Sbjct 4242  CTCGGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCA--AGCCAGCTCCAAGAGCGGCCATAAGAAACAGAA  4313

Query 1272  AAACAAGGACAGGGAGCATTACGTG  1296
            |||||||||||.||||.||||.|||
Sbjct 4314  AAACAAGGACAAGGAGTATTATGTG  4338

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