Nucleotide Global Alignment
Description
- Query:
- TRCN0000470067
- Subject:
- XM_006515570.1
- Aligned Length:
- 4445
- Identities:
- 1127
- Gaps:
- 3193
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTTTACCCTCCACTCAGTTTTCTTCACCTTGAAGGTGAGCATCTTTCTGGGCTCCCTGGTGGGGCTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGGTCTGGAGTTCATGGGCCTTCCTAACCAGTGGGCCCGCTACCTGCGTTGGGATGCAAGCACGCGCAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTGAGCTTCCAGTTCAAGACCAATGTTTCCACTGGGCTGCTCCTGTATTTGGATGATGGTGGTGTCTGTGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCTCTGTCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTTAGCATGGACTGTGCCGAGACCACTGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCCAACAAGCAGGTGAACGACAGCAGTTGGCACTTCCTCATGGTGAGCCGTGATCGTGTGCGCACTGGGCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGATTGATGGTGAGGGCCAGTCTGGAGAGCTACGGCCCCAGCGGCCTTATATGGATGTGGTCAGTGATTTGTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCGGTGGCGTCCCCGCTGACATTCGACCTTCTGCCCTGACCCTCGATGGAGTACAGAGCATGCCTGGCTTTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGATTAATGCTGGATCTCAAGTATGGCAACTCGGAACCTCGGCTTCTGGGGAGCCAGAGCGTCCAGTTAGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAGGGACCCTGTGGCGAGCGTCCCTGTGAAAATGGTGGGATCTGCTTCCTCTTGGATGGTCATCCCACCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTGTTCTACCACTGGCTATGGTGGCACACTCTGCTCAGAAGATGTCAGTCAAGGTCCAGGCCTCTCCCATCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATGATGAGTGAACAAGCACGAGAGGAGAACGTGGCCACCTTCCGAGGCTCAGAGTATCTGTGCTATGACCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCAGAACCCCATCCAGAGCAGCAGCGACGAAATCACCCTTTCCTTTAAGACCTGGCAACGCAATGGGCTCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTCCACACTGGCAAGTCGGCCGACTATGTTAACCTGGCTCTGAAGGATGGTGCGGTCTCCTTGGTCATTAACCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGGTCCGGGGCCTTTGAGGCCATTGTGGAGCCAGTGAATGGGAAATTCAACGACAACGCCTGGCATGATGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGTGACACGCAATCTTCGGCAGGTGACAATCTCTGTGGATGGCATCCTAACCACAACGGGCTACACTCAAGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACTACACCATGCTGGGCTCAGATGACTTCTTCTATGTTGGTGGAAGCCCAAGTACCGCAGACTTGCCAGGTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCTGTGAGCAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGAATAATGACATCCGTCTAGAGCTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCGCTTGGCCCGGATTGGAGACACCAAGATGAAAATCTATGGTGAAGTTGTGTTCAAGTGTGAGAACGTGGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACTGGATCCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACACCAAACGTATGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCCATTTCCTTTGACTTTCGCACCACTGAGCCCAACGGCCTGATTCTCTTCACTCACGGGAAGCCTCAAGAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGAAAGATGTCCGGAGCCAAAAGAACACAAAAGTTGACTTCTTTGCTGTGGAACTTCTTGATGGCAACCTGTAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAAGGCCACTCAGAAGAAGGCCAATGATGGGGAATGGTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCACGTGGATATTCAGCGTGATGGCAGATCAGGTACCATATCTGTGAACAGCAGGCGCACGCCATTCACCGCCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGGGGAGAGTGAAATTCTCGACCTGGAGGGGGACATGTATCTGGGCGGGCTGCCAGAGAACCGAGCTGGCCTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCCTCCCCACGGAGCTCTGGACCGCCATGCTCAACTACGGTTACGTGGGCTGCATCCGCGACCTGTTCATCGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGGCGCAGCAAGAACATCCGGCAGCTGGCGGAGATGCAGAACGCAGCAGGCGTCAAGTCCTCCTGTTCACGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGAGCGCCAAGCAGTGTGACAGCTACCCCTGCAAGAACAACGCGGTGTGCAAGGACGGCTGGAACCGCTTCATC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCGACTGCACTGGCACCGGCTACTGGGGGAGAACCTGCGAAAGAGAGGCATCTATCCTGAGCTATGACGGCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATGTACATGAAGGTCATCATGCCCATGGTGATGCACACGGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGCGAGCCTATGGGCTACTGGTAGCCACAACCTCCAGGGATTCTGCAGATACACTGCGTCTAGAGTTGGATGGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGCGTGTCAAGCTCATGGTTAACTTAGACTGTATCAGGATAAACTGTAACTCCAGCAAAGGACCTGAGACCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTATGCAGGGCAGAAGCTCAATGACAATGAGTGGCACACCGTCCGGGTAGTGCGGAGAGGAAAAAGCCTTAAGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAACAGTGGATGATGATGTGGCTGAGGGGACAATGGTGGGCGACCACACCCGCCTGGAATTCCACAATATTGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTGGTATCATGACTGAGAAGCGTTACATCTCTGTGGTCCCCTCCAGTTTCATTGGCCATCTACAGAGCCTCAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTCAATGGCTTACTGTACATTGATTTGTGCAAAAATGGCGACATCGACTACTGTGAACTGAAGGCTCGCTTTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GACTGAGAAACATCATCGCCGACCCTGTCACTTTTAAGACCAAGAGCAGCTACCTGACCCTCGCCACCCTACAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCTTACACCTCCATGCACCTCTTCTTCCAGTTCAAGACCACTTCAGCTGATGGCTTCATTCTCTTCAATAGCGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGATGGCAATGATTTTATTGCAGTTGAGCTGGTCAAGGGGTACATACACTATGTGTTTGATCTCGGCAATGGTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAACGTGGTCATCACCAGGGAC 2886
Query 1 ---------ATGCAC---CTGA-----GAATCCACGCGAG---------------ACGGAGCC------CT--- 33
|..||| |||| ||..|||.|..|| |.||.||| ||
Sbjct 2887 AGCAGTAACACCCACAGTCTGAAGGTGGACACCAAGGTAGTCACTCAGGTCATCAATGGTGCCAAAAATCTGGA 2960
Query 34 ------------CCTC------GCCGGC--------CGGCCTGGAC--------------GCTTGGGATCTGGT 67
|||| ||.||| .|||.||.|| ||||| |||
Sbjct 2961 TTTGAAAGGTGACCTCTATATGGCTGGCTTAGCCCAGGGCATGTACAGCAACCTTCCCAAGCTTG-----TGG- 3028
Query 68 TCCTGTTCTGGGGATGTATCGTCAG-----------CTCTGTATGGAGTTCTTCTAATGTA--GCTTCCT--CC 126
|| ||..||||||.|| .|||| ||||| ||||.|| .||||.| .||.||| .|
Sbjct 3029 -CC---TCCAGGGATGGAT-TTCAGGGCTGCCTGGCCTCTG--TGGACTT----GAATGGACGCCTGCCTGATC 3091
Query 127 TCCTCCAC----CTCTTCC---------------TCG-CCGGGGTCT----------CA-------CTCTCAGC 163
||.||.|| ||| ||| ||| .||.|| || || ||.||||.
Sbjct 3092 TCATCAACGATGCTC-TCCACAGGAGTGGACAGATCGAGCGAGG-CTGTGAAGGACCCAGTACAACCTGTCAGG 3163
Query 164 ACGA-----GCACCA---------TTTCCATGGCAGC-------AAGCATCACTCAGTGCCTATTTCTATCTAT 216
|.|| ||.||| |||.||| ||||| |.|..|||| |.|||.||
Sbjct 3164 AGGATTCATGCGCCAACCAGGGAGTTTGCAT-GCAGCAGTGGGAAGGTTTCAC-CTGTGACT------------ 3223
Query 217 CGTTCC-------CCTGTTTCCCTTCGAGGAGGAC----------ACGCTGGCGCTACGTACATCTTTGGGAAA 273
|.||| |.|.|| || ||| .|| ||.||||.||.||.|||||||||||||||
Sbjct 3224 -GCTCCATGACATCATATT---CT----GGA-AACCAGTGCAATGACCCTGGTGCAACATACATCTTTGGGAAA 3288
Query 274 AGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGG 347
||.|||||.||.||||||||.|||||||||||.||||||||.||||||||.||.||||||||.||.||||||||
Sbjct 3289 AGCGGTGGCCTCATCCTCTATACCTGGCCAGCAAATGACAGACCCAGCACACGCTCTGACCGTCTCGCCGTGGG 3362
Query 348 CTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGC 421
|||||||||.||||||||||||||.|||||.||.|||||.|||||.||.||.||||||||.|||||||||||||
Sbjct 3363 CTTCAGCACTACTGTGAAGGATGGTATCTTAGTACGCATTGACAGCGCCCCTGGACTTGGCGACTTCCTCCAGC 3436
Query 422 TTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGA 495
|||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||
Sbjct 3437 TTCACATAGAACAAGGGAAAATTGGAGTTGTCTTCAATATTGGCACAGTTGACATCTCCATCAAAGAAGAGAGA 3510
Query 496 ACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGA 569
||.|||||.|||||.|||||||||||.||.||.||||||||||||||.||.||.||.||.||.||.||||||||
Sbjct 3511 ACTCCTGTCAATGATGGCAAATACCACGTTGTGCGCTTCACCAGGAATGGGGGAAATGCTACACTTCAGGTGGA 3584
Query 570 CAACTGGCCAGTGAATGAACATTATCCTAC-------------------------------------------- 599
||||||||||||||||||.||.||||||||
Sbjct 3585 CAACTGGCCAGTGAATGAGCACTATCCTACAGGCAACACTGATAATGAACGCCTCCAAATGGTAAAACAGAAAA 3658
Query 600 ----------------------------------------------AGGCCGGCAGTTAACCATCTTCAACACT 627
||||||||||.||||||||||||||||.
Sbjct 3659 TCCCCTTCAAATATAACCGGCCCGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCAGCTAACCATCTTCAACACC 3732
Query 628 CAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGA 701
|||||||||||||||||.||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||||
Sbjct 3733 CAGGCGCAAATAGCCATCGGAGGAAAGGACAAAGGACGTCTCTTCCAAGGTCAACTCTCTGGGCTCTATTATGA 3806
Query 702 TGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTG 775
||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||.|||||.||.|
Sbjct 3807 TGGTTTGAAAGTACTGAACATGGCAGCTGAGAACAACCCTAATATTAAAATCAATGGAAGTGTCCGGCTAGTGG 3880
Query 776 GAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAA 849
||||||||||||||.|.|..||||||||||||||.||.|||||||||||.|||||||||||.||.|||||||||
Sbjct 3881 GAGAAGTCCCATCAGTCTCAGGAACAACACAGACAACGTCCATGCCACCTGAAATGTCTACCACCGTCATGGAA 3954
Query 850 ACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGA 923
|||||.||.||.|||||.||.|||||.|||||.|||||.|||||||||||||||||||||||.||.||||||||
Sbjct 3955 ACCACCACCACCATGGCTACGACCACCACCCGAAAGAACCGCTCTACAGCCAGCATTCAGCCCACGTCAGATGA 4028
Query 924 TCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAGGTCAG 997
|||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||||||||||||||||
Sbjct 4029 TCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTCGAATGTGAACCAAGTACAGGTAGGTCAG 4102
Query 998 CAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACA 1071
||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||
Sbjct 4103 CAAACCCCACGGAGCCAGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCCAGCAGTACAACA 4176
Query 1072 GGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAG 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4177 GGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAG 4250
Query 1146 GAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCA 1219
|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||||||||||||||
Sbjct 4251 GAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGAGGAACTACATCAGCAACTCGGCCCAGAGCAACGGCA 4324
Query 1220 CGCTCATGAAGGAGAAGCAGCAG--AGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGCATT 1291
||||||||||||||||||| || |||||.|||||||||||.||||||||||||||||||||||.||||.|||
Sbjct 4325 CGCTCATGAAGGAGAAGCA--AGCCAGCTCCAAGAGCGGCCATAAGAAACAGAAAAACAAGGACAAGGAGTATT 4396
Query 1292 ACGTG 1296
|.|||
Sbjct 4397 ATGTG 4401
