Nucleotide Global Alignment
Description
- Query:
- TRCN0000470067
- Subject:
- XM_017021804.1
- Aligned Length:
- 4426
- Identities:
- 1214
- Gaps:
- 3155
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTCCACACTCCACTCGGTTTTCTTCACCCTGAAGGTCAGCATCCTGCTGGGGTCCCTGCTGGGGCTCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGGCCTTGAGTTCATGGGCCTCCCCAACCAGTGGGCCCGCTACCTCCGCTGGGATGCCAGCACACGCAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTGAGTTTCCAGTTCAAGACCAACGTCTCTACGGGGCTGCTCCTCTACCTGGATGATGGCGGCGTCTGCGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCTATGCCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCATGGACTGTGCCGAGACTGCCGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGACCGCCTGCGCACGGTGCTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCTTGATGGCGAGGGCCAGTCTGGGGAGCTGCAGCCCCAGCGGCCCTACATGGATGTGGTCAGTGACTTGTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGGTGGAGTCCCTACTGACATACGACCTTCTGCCCTGACCCTTGATGGAGTTCAGGCCATGCCCGGCTTCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGGTTAATTCTGGATCTCAAGTATGGAAACTCGGAGCCTCGGCTTCTGGGGAGCCGGGGTGTCCAGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGAGGGACCCTGTGGTGAGCGTCCCTGTGAAAATGGTGGGATCTGCTTTCTCCTGGACGGCCACCCCACCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTGTTCTACCACTGGCTATGGTGGCAAGCTCTGCTCAGAAGATGTCAGTCAAGATCCAGGCCTCTCCCACCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATGATGAGTGAACAAGGTAGAAGTAAAGCTCGAGAGGAGAATGTGGCCACTTTCCGAGGCTCAGAGTATCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTACGACCTGTCTCAGAACCCGATCCAGAGCAGCAGTGATGAAATCACCCTCTCCTTTAAGACCTGGCAGCGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACGGCCTCATCCTGCACACGGGCAAGTCGGCTGACTATGTCAACCTGGCTCTGAAGGATGGTGCGGTCTCCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTCATTAACCTGGGGTCCGGGGCCTTTGAGGCCATTGTGGAGCCAGTGAATGGAAAATTCAACGACAACGCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCATGATGTCAAAGTGACACGCAACCTCCGGCAGCACTCAGGCATCGGACACGCTATGGTGACAATCTCTGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATGGCATTCTTACCACGACGGGCTACACTCAAGAGGACTATACCATGCTGGGCTCGGACGACTTCTTCTATGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGAGGAAGCCCAAGTACCGCTGACTTGCCTGGCTCCCCTGTCAGCAACAACTTCATGGGCTGCCTTAAAGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGTTTATAAGAATAATGACATCCGTCTGGAGCTGTCTCGCCTGGCCCGGATTGCGGACACCAAGATGAAAATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATGGCGAAGTTGTGTTTAAGTGTGAGAATGTGGCCACACTGGACCCCATCAACTTTGAGACCCCAGAGGCTTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATCAGCTTGCCCAAGTGGAACACTAAACGTATGGGCTCCATCTCCTTTGACTTCCGCACCACAGAGCCCAATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCTGATCCTCTTCACTCATGGAAAGCCCCAAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCTTTGCCGTGGAACTCCTCGATGGCAACCTGTACTTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGCCACTCAGAAGAAAGCCAATGATGGGGAATGGTACCATGTGGACATTCAGCGAGATGGCAGATCAGGTACTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TATCAGTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGAGCGAGATCCTGGACCTGGAAGGAGACATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TACCTGGGAGGGCTGCCGGAGAACCGTGCTGGCCTTATTCTCCCCACCGAGCTGTGGACTGCCATGCTCAACTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGCTACGTGGGCTGCATCCGCGACCTATTCATTGATGGGCGCAGCAAGAACATTCGACAGCTGGCAGAGATGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCTACCCCTGCAAGAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATGCTGTGTGCAAGGACGGCTGGAACCGCTTCATCTGCGACTGCACCGGCACCGGATACTGGGGAAGAACCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CGAAAGGGAGGCATCCATCCTGAGCTATGATGGTAGCATGTACATGAAGATCATCATGCCCATGGTCATGCATA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCCCAGCGAGCTTATGGGCTGCTGGTGGCTACGACCTCCAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACTCTGCCGACACCCTGCGTCTGGAGCTGGATGGGGGGCGTGTCAAGCTCATGGTTAACTTAGGCAAAGGACC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGAGACCTTGTATGCAGGGCAGAAGCTCAATGACAACGAGTGGCACACCGTTCGGGTGGTGCGGAGAGGAAAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCCTTAAGTTAACCGTGGATGATGATGTGGCTGAGGGTACAATGGTGGGAGACCATACCCGTTTGGAGTTCCAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AACATTGAAACGGGAATCATGACTGAGAAACGCTACATCTCCGTTGTCCCCTCCAGCTTTATTGGCCATCTGCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GAGCCTCATGTTTAATGGCCTTCTCTACATTGACTTGTGCAAAAATGGTGACATTGATTATTGTGAGCTGAAGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTCGTTTTGGACTGAGGAACATCATCGCTGACCCTGTCACCTTTAAGACCAAGAGCAGCTACCTGAGCCTTGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACTCTTCAGGCTTACACCTCCATGCACCTCTTCTTCCAGTTCAAGACCACCTCACCAGATGGCTTCATTCTCTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAATAGTGGTGATGGCAATGACTTCATTGCAGTCGAGCTTGTCAAGGGGTATATACACTACGTTTTTGACCTCG 2812
Query 1 ---------------------------------------------ATG--CACCTG----AGAAT-------CC 16
||| .|||.| |.||| .|
Sbjct 2813 GAAACGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAATGTCGTCATC 2886
Query 17 ACGCGAGAC----GGAGCCCTCCTCGCC-------GGCCGGCC----TGGACGCTTGGG--------------- 60
||.||.||| |.|.|.|||.|.||| ||.| .|| |||.|.||..||
Sbjct 2887 ACTCGGGACAATAGTAACACTCATAGCCTGAAAGTGGAC-ACCAAAGTGGTCACTCAGGTTATCAATGGTGCCA 2959
Query 61 ---ATCTGG---------------------TTCCTGTTCTG------GGGATGTA-----------------TC 87
|||||| |..|||.|||| ||.||||| ||
Sbjct 2960 AAAATCTGGATTTGAAAGGTGATCTCTATATGGCTGGTCTGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTC 3033
Query 88 GTCAGCTCT---GTATGGAGTTC------TTCTA--AT--GTAG-CTT---------CCT------CCTCCTCC 132
||...|||| | ||||..||| .|||| || ||.| ||| ||| ||||.||.
Sbjct 3034 GTGGCCTCTCGAG-ATGGCTTTCAGGGCTGTCTAGCATCAGTGGACTTGAATGGACGCCTGCCAGACCTCATCA 3106
Query 133 A----CCTCTTCCTCGCCGGGGTCTCACTCTCAGCACGAGC--------------ACCATTTCCA--TGGCAGC 186
| .||||||.|||..|.|| .|||..||||| .|||.|.||| ||.|||.
Sbjct 3107 ATGATGCTCTTCATCGGAGCGG--------ACAGATCGAGCGTGGCTGTGAAGGACCCAGTACCACCTGCCAGG 3172
Query 187 AAGCATCACTCA-GTGCCTA------TTTCT------ATCTATCG------TTCCCCTGT--TTCCCTTCGAGG 239
||| |.||| |||||.| ..||| |.|.||.| |||.||||| || .|||.|.|
Sbjct 3173 AAG----ATTCATGTGCCAACCAGGGGGTCTGCATGCAACAATGGGAGGGCTTCACCTGTGATT--GTTCTATG 3240
Query 240 A-----------GGACAC------------GCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCT 290
| |||.|| .|||||||||||||||||||||||||||||||||||||||||||
Sbjct 3241 ACCTCTTATTCTGGAAACCAGTGCAATGATCCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCT 3314
Query 291 CTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGA 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3315 CTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGA 3388
Query 365 AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGG 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3389 AGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGG 3462
Query 439 AAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGG 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3463 AAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGG 3536
Query 513 CAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATG 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3537 CAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATG 3610
Query 587 AACATTATCCTAC------------------------------------------------------------- 599
|||||||||||||
Sbjct 3611 AACATTATCCTACAGGCAACACTGATAATGAACGCTTCCAAATGGTAAAACAGAAAATCCCCTTCAAATATAAT 3684
Query 600 -----------------------------AGGCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT 644
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3685 CGGCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCAT 3758
Query 645 TGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGA 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3759 TGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGA 3832
Query 719 ACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATT 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3833 ACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATT 3906
Query 793 TTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAAACCACTACTACAATGGC 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3907 TTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAAACCACTACTACAATGGC 3980
Query 867 GACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTG 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3981 GACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTG 4054
Query 941 AATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAGGTCAGCAAACCCCACGGAGCCG 1014
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 4055 AATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTA---------CAGCAAACCCCACGGAGCCG 4119
Query 1015 GGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCAT 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4120 GGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCAT 4193
Query 1089 TGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGT 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4194 TGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGT 4267
Query 1163 CCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAG 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4268 CCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAG 4341
Query 1237 CAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGCATTACGTG 1296
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 4342 CAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGTATTACGTG 4401
