Nucleotide Global Alignment
Description
- Query:
- TRCN0000470067
- Subject:
- XM_017314982.1
- Aligned Length:
- 4714
- Identities:
- 1127
- Gaps:
- 3461
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTTTACCCTCCACTCAGTTTTCTTCACCTTGAAGGTGAGCATCTTTCTGGGCTCCCTGGTGGGGCTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGGTCTGGAGTTCATGGGCCTTCCTAACCAGTGGGCCCGCTACCTGCGTTGGGATGCAAGCACGCGCAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTGAGCTTCCAGTTCAAGACCAATGTTTCCACTGGGCTGCTCCTGTATTTGGATGATGGTGGTGTCTGTGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCTCTGTCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTTAGCATGGACTGTGCCGAGACCACTGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCCAACAAGCAGGTGAACGACAGCAGTTGGCACTTCCTCATGGTGAGCCGTGATCGTGTGCGCACTGGGCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGATTGATGGTGAGGGCCAGTCTGGAGAGCTACGGCCCCAGCGGCCTTATATGGATGTGGTCAGTGATTTGTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCGGTGGCGTCCCCGCTGACATTCGACCTTCTGCCCTGACCCTCGATGGAGTACAGAGCATGCCTGGCTTTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGATTAATGCTGGATCTCAAGTATGGCAACTCGGAACCTCGGCTTCTGGGGAGCCAGAGCGTCCAGTTAGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAGGGACCCTGTGGCGAGCGTCCCTGTGAAAATGGTGGGATCTGCTTCCTCTTGGATGGTCATCCCACCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTGTTCTACCACTGGCTATGGTGGCACACTCTGCTCAGAAGATGTCAGTCAAGGTCCAGGCCTCTCCCATCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATGATGAGTGAACAAGGTAGAAGTAAAGCACGAGAGGAGAACGTGGCCACCTTCCGAGGCTCAGAGTATCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTATGACCTGTCCCAGAACCCCATCCAGAGCAGCAGCGACGAAATCACCCTTTCCTTTAAGACCTGGCAACGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGGGCTCATCCTCCACACTGGCAAGTCGGCCGACTATGTTAACCTGGCTCTGAAGGATGGTGCGGTCTCCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTCATTAACCTGGGGTCCGGGGCCTTTGAGGCCATTGTGGAGCCAGTGAATGGGAAATTCAACGACAACGCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCATGATGTCAAAGTGACACGCAATCTTCGGCAGGTGACAATCTCTGTGGATGGCATCCTAACCACAACGGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TACACTCAAGAGGACTACACCATGCTGGGCTCAGATGACTTCTTCTATGTTGGTGGAAGCCCAAGTACCGCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGCCAGGTTCACCTGTGAGCAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGAATAATGACATCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTCTAGAGCTGTCTCGCTTGGCCCGGATTGGAGACACCAAGATGAAAATCTATGGTGAAGTTGTGTTCAAGTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAACGTGGCCACACTGGATCCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAAACGTATGGGCTCCATTTCCTTTGACTTTCGCACCACTGAGCCCAACGGCCTGATTCTCTTCACTCACGGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCCTCAAGAAAGGAAAGATGTCCGGAGCCAAAAGAACACAAAAGTTGACTTCTTTGCTGTGGAACTTCTTGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCAACCTGTATTTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAAGGCCACTCAGAAGAAGGCCAATGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGGGAATGGTACCACGTGGATATTCAGCGTGATGGCAGATCAGGTACCATATCTGTGAACAGCAGGCGCACGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATTCACCGCCAGTGGGGAGAGTGAAATTCTCGACCTGGAGGGGGACATGTATCTGGGCGGGCTGCCAGAGAAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGAGCTGGCCTCATCCTCCCCACGGAGCTCTGGACCGCCATGCTCAACTACGGTTACGTGGGCTGCATCCGCGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTGTTCATCGATGGGCGCAGCAAGAACATCCGGCAGCTGGCGGAGATGCAGAACGCAGCAGGCGTCAAGTCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTGTTCACGCATGAGCGCCAAGCAGTGTGACAGCTACCCCTGCAAGAACAACGCGGTGTGCAAGGACGGCTGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AACCGCTTCATCTGCGACTGCACTGGCACCGGCTACTGGGGGAGAACCTGCGAAAGAGAGGCATCTATCCTGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTATGACGGCAGCATGTACATGAAGGTCATCATGCCCATGGTGATGCACACGGAGGCAGAGGATGTGTCCTTCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCTTCATGTCACAGCGAGCCTATGGGCTACTGGTAGCCACAACCTCCAGGGATTCTGCAGATACACTGCGTCTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGTTGGATGGTGGGCGTGTCAAGCTCATGGTTAACTTAGACTGTATCAGGATAAACTGTAACTCCAGCAAAGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACCTGAGACCCTGTATGCAGGGCAGAAGCTCAATGACAATGAGTGGCACACCGTCCGGGTAGTGCGGAGAGGAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAAGCCTTAAGCTAACAGTGGATGATGATGTGGCTGAGGGGACAATGGTGGGCGACCACACCCGCCTGGAATTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CACAATATTGAAACTGGTATCATGACTGAGAAGCGTTACATCTCTGTGGTCCCCTCCAGTTTCATTGGCCATCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACAGAGCCTCATGTTCAATGGCTTACTGTACATTGATTTGTGCAAAAATGGCGACATCGACTACTGTGAACTGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGGCTCGCTTTGGACTGAGAAACATCATCGCCGACCCTGTCACTTTTAAGACCAAGAGCAGCTACCTGACCCTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCCACCCTACAGGCTTACACCTCCATGCACCTCTTCTTCCAGTTCAAGACCACTTCAGCTGATGGCTTCATTCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTTCAATAGCGGAGATGGCAATGATTTTATTGCAGTTGAGCTGGTCAAGGGGTACATACACTATGTGTTTGATC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCGGCAATGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAACGTGGTC 2886
Query 1 ---------------------ATGCAC---CTGA-----GAATCCACGCGAG---------------ACGGAGC 30
|..||| |||| ||..|||.|..|| |.||.||
Sbjct 2887 ATCACCAGGGACAGCAGTAACACCCACAGTCTGAAGGTGGACACCAAGGTAGTCACTCAGGTCATCAATGGTGC 2960
Query 31 C------CT---------------CCTC------GCCGGC--------CGGCCTGGAC--------------GC 55
| || |||| ||.||| .|||.||.|| ||
Sbjct 2961 CAAAAATCTGGATTTGAAAGGTGACCTCTATATGGCTGGCTTAGCCCAGGGCATGTACAGCAACCTTCCCAAGC 3034
Query 56 TTGGGATCTGGTTCCTGTTCTGGGGATGTATCGTCAG-----------CTCTGTATGGAGTTCTTCTAATGTA- 117
||| ||| || ||..||||||.|| .|||| ||||| ||||.|| .||||.|
Sbjct 3035 TTG-----TGG--CC---TCCAGGGATGGAT-TTCAGGGCTGCCTGGCCTCTG--TGGACTT----GAATGGAC 3091
Query 118 -GCTTCCT--CCTCCTCCAC----CTCTTCC---------------TCG------------------------- 144
.||.||| .|||.||.|| ||| ||| |||
Sbjct 3092 GCCTGCCTGATCTCATCAACGATGCTC-TCCACAGGAGTGGACAGATCGAGCGAGGCTGTGAAGTTGCGTTGAC 3164
Query 145 ---------CCGG---GGTCTCA-------CTCTCAGCACGA-----GCACCA---------TTTCCATGGCAG 185
||.| ||.|.|| ||.||||.|.|| ||.||| |||.||| ||||
Sbjct 3165 CAAAGCTGACCTGCAAGGACCCAGTACAACCTGTCAGGAGGATTCATGCGCCAACCAGGGAGTTTGCAT-GCAG 3237
Query 186 C-------AAGCATCACTCAGTGCCTATTTCTATCTATCGTTCC-------CCTGTTTCCCTTCGAGGAGGAC- 244
| |.|..|||| |.|||.|| |.||| |.|.|| || ||| .||
Sbjct 3238 CAGTGGGAAGGTTTCAC-CTGTGACT-------------GCTCCATGACATCATATT---CT----GGA-AACC 3289
Query 245 ---------ACGCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAAT 309
||.||||.||.||.|||||||||||||||||.|||||.||.||||||||.|||||||||||.|||
Sbjct 3290 AGTGCAATGACCCTGGTGCAACATACATCTTTGGGAAAAGCGGTGGCCTCATCCTCTATACCTGGCCAGCAAAT 3363
Query 310 GACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCG 383
|||||.||||||||.||.||||||||.||.|||||||||||||||||.||||||||||||||.|||||.||.||
Sbjct 3364 GACAGACCCAGCACACGCTCTGACCGTCTCGCCGTGGGCTTCAGCACTACTGTGAAGGATGGTATCTTAGTACG 3437
Query 384 CATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCA 457
|||.|||||.||.||.||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 3438 CATTGACAGCGCCCCTGGACTTGGCGACTTCCTCCAGCTTCACATAGAACAAGGGAAAATTGGAGTTGTCTTCA 3511
Query 458 ACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGC 531
|.|||||||||||||||||||||||||||||.||||||||.|||||.|||||.|||||||||||.||.||.|||
Sbjct 3512 ATATTGGCACAGTTGACATCTCCATCAAAGAAGAGAGAACTCCTGTCAATGATGGCAAATACCACGTTGTGCGC 3585
Query 532 TTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCCG 605
|||||||||||.||.||.||.||.||.||.||||||||||||||||||||||||||.||.||||||||||||||
Sbjct 3586 TTCACCAGGAATGGGGGAAATGCTACACTTCAGGTGGACAACTGGCCAGTGAATGAGCACTATCCTACAGGCCG 3659
Query 606 GCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCC 679
||||.||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||.|||||||||||.|
Sbjct 3660 GCAGCTAACCATCTTCAACACCCAGGCGCAAATAGCCATCGGAGGAAAGGACAAAGGACGTCTCTTCCAAGGTC 3733
Query 680 AACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATC 753
||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||
Sbjct 3734 AACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCAGCTGAGAACAACCCTAATATTAAAATC 3807
Query 754 AATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGA 827
|||||||||||.|||||.||.|||||||||||||||.|.|..||||||||||||||.||.|||||||||||.||
Sbjct 3808 AATGGAAGTGTCCGGCTAGTGGGAGAAGTCCCATCAGTCTCAGGAACAACACAGACAACGTCCATGCCACCTGA 3881
Query 828 AATGTCTACTACTGTCATGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCA 901
|||||||||.||.||||||||||||||.||.||.|||||.||.|||||.|||||.|||||.|||||||||||||
Sbjct 3882 AATGTCTACCACCGTCATGGAAACCACCACCACCATGGCTACGACCACCACCCGAAAGAACCGCTCTACAGCCA 3955
Query 902 GCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGT 975
||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 3956 GCATTCAGCCCACGTCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTCGAATGT 4029
Query 976 GAGCCGAGTACAGGTAGGT------------------------------------------------------- 994
||.||.|||||||||||||
Sbjct 4030 GAACCAAGTACAGGTAGGTCAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCC 4103
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4104 CAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCGGAAACTAGTAGAACTACAACCACCTCTTTGTCCC 4177
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4178 CTGAGCTGATCCGCTTCACAGCGTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAAC 4251
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4252 CGTGATCTCAAACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAGACAGCACCAAACT 4325
Query 995 --------------------------------------------CAGCAAACCCCACGGAGCCGGGAATCAGAC 1024
|||||||||||||||||||.||||||||||
Sbjct 4326 GAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCAGGAATCAGAC 4399
Query 1025 GGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCT 1098
||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||
Sbjct 4400 GGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCCAGCAGTACAACAGGGATGGTCGTCGGCATTGTGGCTGCT 4473
Query 1099 GCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGT 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4474 GCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGT 4547
Query 1173 GGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAG--AG 1244
||||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||||||| || ||
Sbjct 4548 GGACGAGACGAGGAACTACATCAGCAACTCGGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCA--AGCCAG 4619
Query 1245 CTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGCATTACGTG 1296
|||.|||||||||||.||||||||||||||||||||||.||||.||||.|||
Sbjct 4620 CTCCAAGAGCGGCCATAAGAAACAGAAAAACAAGGACAAGGAGTATTATGTG 4671
