Nucleotide Global Alignment

Description

Query:
TRCN0000470067
Subject:
XM_017314987.1
Aligned Length:
3583
Identities:
1127
Gaps:
2330

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTGGGCTCAGATGACTTCTTCTATGTTGGTGGAAGCCCAAGTACCGCAGACTTGCCAGGTTCACCTGTGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGAATAATGACATCCGTCTAGAGCTGTCTCGCTTGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCGGATTGGAGACACCAAGATGAAAATCTATGGTGAAGTTGTGTTCAAGTGTGAGAACGTGGCCACACTGGAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACACCAAACGTATGGGCTCCATTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTTGACTTTCGCACCACTGAGCCCAACGGCCTGATTCTCTTCACTCACGGGAAGCCTCAAGAAAGGAAAGATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCGGAGCCAAAAGAACACAAAAGTTGACTTCTTTGCTGTGGAACTTCTTGATGGCAACCTGTATTTGCTGCTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GACATGGGCTCTGGCACCATCAAAGTGAAGGCCACTCAGAAGAAGGCCAATGATGGGGAATGGTACCACGTGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TATTCAGCGTGATGGCAGATCAGGTACCATATCTGTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGAAATTCTCGACCTGGAGGGGGACATGTATCTGGGCGGGCTGCCAGAGAACCGAGCTGGCCTCATCCTCCCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACGGAGCTCTGGACCGCCATGCTCAACTACGGTTACGTGGGCTGCATCCGCGACCTGTTCATCGATGGGCGCAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAAGAACATCCGGCAGCTGGCGGAGATGCAGAACGCAGCAGGCGTCAAGTCCTCCTGTTCACGCATGAGCGCCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGCAGTGTGACAGCTACCCCTGCAAGAACAACGCGGTGTGCAAGGACGGCTGGAACCGCTTCATCTGCGACTGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACTGGCACCGGCTACTGGGGGAGAACCTGCGAAAGAGAGGCATCTATCCTGAGCTATGACGGCAGCATGTACAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAGGTCATCATGCCCATGGTGATGCACACGGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCACAGCGAGCCT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATGGGCTACTGGTAGCCACAACCTCCAGGGATTCTGCAGATACACTGCGTCTAGAGTTGGATGGTGGGCGTGTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AAGCTCATGGTTAACTTAGACTGTATCAGGATAAACTGTAACTCCAGCAAAGGACCTGAGACCCTGTATGCAGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCAGAAGCTCAATGACAATGAGTGGCACACCGTCCGGGTAGTGCGGAGAGGAAAAAGCCTTAAGCTAACAGTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATGATGATGTGGCTGAGGGGACAATGGTGGGCGACCACACCCGCCTGGAATTCCACAATATTGAAACTGGTATC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATGACTGAGAAGCGTTACATCTCTGTGGTCCCCTCCAGTTTCATTGGCCATCTACAGAGCCTCATGTTCAATGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTTACTGTACATTGATTTGTGCAAAAATGGCGACATCGACTACTGTGAACTGAAGGCTCGCTTTGGACTGAGAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACATCATCGCCGACCCTGTCACTTTTAAGACCAAGAGCAGCTACCTGACCCTCGCCACCCTACAGGCTTACACC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCCATGCACCTCTTCTTCCAGTTCAAGACCACTTCAGCTGATGGCTTCATTCTCTTCAATAGCGGAGATGGCAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGATTTTATTGCAGTTGAGCTGGTCAAGGGGTACATACACTATGTGTTTGATCTCGGCAATGGTCCCAATGTGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGGCACAACGTGGTCATCACCAGGGACAGCAGTAAC  1776

Query    1  ATGCAC---CTGA-----GAATCCACGCGAG---------------ACGGAGCC------CT------------  33
            |..|||   ||||     ||..|||.|..||               |.||.|||      ||            
Sbjct 1777  ACCCACAGTCTGAAGGTGGACACCAAGGTAGTCACTCAGGTCATCAATGGTGCCAAAAATCTGGATTTGAAAGG  1850

Query   34  ---CCTC------GCCGGC--------CGGCCTGGAC--------------GCTTGGGATCTGGTTCCTGTTCT  76
               ||||      ||.|||        .|||.||.||              |||||     |||  ||   ||.
Sbjct 1851  TGACCTCTATATGGCTGGCTTAGCCCAGGGCATGTACAGCAACCTTCCCAAGCTTG-----TGG--CC---TCC  1914

Query   77  GGGGATGTATCGTCAG-----------CTCTGTATGGAGTTCTTCTAATGTA--GCTTCCT--CCTCCTCCAC-  134
            .||||||.|| .||||           |||||  ||||.||    .||||.|  .||.|||  .|||.||.|| 
Sbjct 1915  AGGGATGGAT-TTCAGGGCTGCCTGGCCTCTG--TGGACTT----GAATGGACGCCTGCCTGATCTCATCAACG  1981

Query  135  ---CTCTTCC---------------TCG----------------------------------CCGG---GGTCT  153
               ||| |||               |||                                  ||.|   ||.|.
Sbjct 1982  ATGCTC-TCCACAGGAGTGGACAGATCGAGCGAGGCTGTGAAGTTGCGTTGACCAAAGCTGACCTGCAAGGACC  2054

Query  154  CA-------CTCTCAGCACGA-----GCACCA---------TTTCCATGGCAGC-------AAGCATCACTCAG  199
            ||       ||.||||.|.||     ||.|||         |||.||| |||||       |.|..|||| |.|
Sbjct 2055  CAGTACAACCTGTCAGGAGGATTCATGCGCCAACCAGGGAGTTTGCAT-GCAGCAGTGGGAAGGTTTCAC-CTG  2126

Query  200  TGCCTATTTCTATCTATCGTTCC-------CCTGTTTCCCTTCGAGGAGGAC----------ACGCTGGCGCTA  256
            ||.||             |.|||       |.|.||   ||    ||| .||          ||.||||.||.|
Sbjct 2127  TGACT-------------GCTCCATGACATCATATT---CT----GGA-AACCAGTGCAATGACCCTGGTGCAA  2179

Query  257  CGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCT  330
            |.|||||||||||||||||.|||||.||.||||||||.|||||||||||.||||||||.||||||||.||.|||
Sbjct 2180  CATACATCTTTGGGAAAAGCGGTGGCCTCATCCTCTATACCTGGCCAGCAAATGACAGACCCAGCACACGCTCT  2253

Query  331  GACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACT  404
            |||||.||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.||.||.|||||
Sbjct 2254  GACCGTCTCGCCGTGGGCTTCAGCACTACTGTGAAGGATGGTATCTTAGTACGCATTGACAGCGCCCCTGGACT  2327

Query  405  TGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCT  478
            |||.||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||
Sbjct 2328  TGGCGACTTCCTCCAGCTTCACATAGAACAAGGGAAAATTGGAGTTGTCTTCAATATTGGCACAGTTGACATCT  2401

Query  479  CCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAAC  552
            ||||||||||.||||||||.|||||.|||||.|||||||||||.||.||.||||||||||||||.||.||.||.
Sbjct 2402  CCATCAAAGAAGAGAGAACTCCTGTCAATGATGGCAAATACCACGTTGTGCGCTTCACCAGGAATGGGGGAAAT  2475

Query  553  GCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCCGGCAGTTAACCATCTTCAACAC  626
            ||.||.||.||||||||||||||||||||||||||.||.||||||||||||||||||.||||||||||||||||
Sbjct 2476  GCTACACTTCAGGTGGACAACTGGCCAGTGAATGAGCACTATCCTACAGGCCGGCAGCTAACCATCTTCAACAC  2549

Query  627  TCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATG  700
            .|||||||||||||||||.||.|||||||||||||||||.|||||||||||.||||||||||||||||||||||
Sbjct 2550  CCAGGCGCAAATAGCCATCGGAGGAAAGGACAAAGGACGTCTCTTCCAAGGTCAACTCTCTGGGCTCTATTATG  2623

Query  701  ATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTT  774
            |||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||.|||||.||.
Sbjct 2624  ATGGTTTGAAAGTACTGAACATGGCAGCTGAGAACAACCCTAATATTAAAATCAATGGAAGTGTCCGGCTAGTG  2697

Query  775  GGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGA  848
            |||||||||||||||.|.|..||||||||||||||.||.|||||||||||.|||||||||||.||.||||||||
Sbjct 2698  GGAGAAGTCCCATCAGTCTCAGGAACAACACAGACAACGTCCATGCCACCTGAAATGTCTACCACCGTCATGGA  2771

Query  849  AACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATG  922
            ||||||.||.||.|||||.||.|||||.|||||.|||||.|||||||||||||||||||||||.||.|||||||
Sbjct 2772  AACCACCACCACCATGGCTACGACCACCACCCGAAAGAACCGCTCTACAGCCAGCATTCAGCCCACGTCAGATG  2845

Query  923  ATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAGGT--  994
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||||||||||  
Sbjct 2846  ATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTCGAATGTGAACCAAGTACAGGTAGGTCA  2919

Query  995  --------------------------------------------------------------------------  994
                                                                                      
Sbjct 2920  GATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGGACTT  2993

Query  995  --------------------------------------------------------------------------  994
                                                                                      
Sbjct 2994  TAGACCTAACAAAGTCTCGGAAACTAGTAGAACTACAACCACCTCTTTGTCCCCTGAGCTGATCCGCTTCACAG  3067

Query  995  --------------------------------------------------------------------------  994
                                                                                      
Sbjct 3068  CGTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCT  3141

Query  995  --------------------------------------------------------------------------  994
                                                                                      
Sbjct 3142  GATATAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCCCACTAATTACTTC  3215

Query  995  -----------------------CAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGG  1045
                                   |||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 3216  CCCCATGTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCAGGAATCAGACGGGTTCCGGGGGCCTCAGAGG  3289

Query 1046  TGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATC  1119
            |||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3290  TGATCCGGGAGTCCAGCAGTACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATC  3363

Query 1120  CTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACAT  1193
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 3364  CTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGAGGAACTACAT  3437

Query 1194  CAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAG--AGCTCGAAGAGCGGCCACAAGAA  1265
            |||||||||.|||||||||||||||||||||||||||||||||||  ||  |||||.|||||||||||.|||||
Sbjct 3438  CAGCAACTCGGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCA--AGCCAGCTCCAAGAGCGGCCATAAGAA  3509

Query 1266  ACAGAAAAACAAGGACAGGGAGCATTACGTG  1296
            |||||||||||||||||.||||.||||.|||
Sbjct 3510  ACAGAAAAACAAGGACAAGGAGTATTATGTG  3540