Nucleotide Global Alignment
Description
- Query:
- TRCN0000470067
- Subject:
- XM_017314988.1
- Aligned Length:
- 2004
- Identities:
- 1189
- Gaps:
- 717
Alignment
Query 1 ATGCACCTGAGAATCCACGCGAGACGGAGCCCTCCTCGCCGGCCGGCCTGGACGCTTGGGATCTGGTTCCTGTT 74
||||||||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||||||.|||.||
Sbjct 1 ATGCACCTGAGAATCCACCCAAGACGGAGCCCTCCTCGCCGGCCGGCCTGGACGCTTGGGATCTGGTCCCTCTT 74
Query 75 CTGGGGATGTATCGTCAGCTCTGTATGGAGTTCTTCTAATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG 148
||||||||||||||||||||||||.||||||||||||||||||| ||||||||.||||||||||.||||
Sbjct 75 CTGGGGATGTATCGTCAGCTCTGTGTGGAGTTCTTCTAATGTAG------CCTCCTCCTCCTCTTCCTCTCCGG 142
Query 149 GGTCTCACTCTCAGCACGAGCACCATTTCCATGGCAGCAAGCATCACTCAGTGCCTATTTCTATCTATCGTTCC 222
|.||||||||||||||.||.|||||||||||.|||||||||||.|||||.||||||||||||||||||||.|||
Sbjct 143 GATCTCACTCTCAGCAGGAACACCATTTCCACGGCAGCAAGCACCACTCTGTGCCTATTTCTATCTATCGCTCC 216
Query 223 CCTGTTTCCCTTCGAGGAGGACACGCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACAC 296
||||||||||||||||||||.||||||||.||.||.|||||||||||||||||.|||||.||.||||||||.||
Sbjct 217 CCTGTTTCCCTTCGAGGAGGGCACGCTGGTGCAACATACATCTTTGGGAAAAGCGGTGGCCTCATCCTCTATAC 290
Query 297 CTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATG 370
|||||||||.||||||||.||||||||.||.||||||||.||.|||||||||||||||||.|||||||||||||
Sbjct 291 CTGGCCAGCAAATGACAGACCCAGCACACGCTCTGACCGTCTCGCCGTGGGCTTCAGCACTACTGTGAAGGATG 364
Query 371 GCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATT 444
|.|||||.||.|||||.|||||.||.||.||||||||.||||||||||||||||||||||||||.|||||||||
Sbjct 365 GTATCTTAGTACGCATTGACAGCGCCCCTGGACTTGGCGACTTCCTCCAGCTTCACATAGAACAAGGGAAAATT 438
Query 445 GGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATA 518
||||||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||||
Sbjct 439 GGAGTTGTCTTCAATATTGGCACAGTTGACATCTCCATCAAAGAAGAGAGAACTCCTGTCAATGATGGCAAATA 512
Query 519 CCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATT 592
|||.||.||.||||||||||||||.||.||.||.||.||.||.||||||||||||||||||||||||||.||.|
Sbjct 513 CCACGTTGTGCGCTTCACCAGGAATGGGGGAAATGCTACACTTCAGGTGGACAACTGGCCAGTGAATGAGCACT 586
Query 593 ATCCTAC------------------------------------------------------------------- 599
|||||||
Sbjct 587 ATCCTACAGGCAACACTGATAATGAACGCCTCCAAATGGTAAAACAGAAAATCCCCTTCAAATATAACCGGCCC 660
Query 600 -----------------------AGGCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGG 650
||||||||||.||||||||||||||||.|||||||||||||||||.||.||
Sbjct 661 GTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCAGCTAACCATCTTCAACACCCAGGCGCAAATAGCCATCGGAGG 734
Query 651 AAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGG 724
|||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AAAGGACAAAGGACGTCTCTTCCAAGGTCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGG 808
Query 725 CGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGA 798
|.||||||||||||||.|||||||||||||||||||||||.|||||.||.|||||||||||||||.|.|..|||
Sbjct 809 CAGCTGAGAACAACCCTAATATTAAAATCAATGGAAGTGTCCGGCTAGTGGGAGAAGTCCCATCAGTCTCAGGA 882
Query 799 ACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAAACCACTACTACAATGGCGACTAC 872
|||||||||||.||.|||||||||||.|||||||||||.||.||||||||||||||.||.||.|||||.||.||
Sbjct 883 ACAACACAGACAACGTCCATGCCACCTGAAATGTCTACCACCGTCATGGAAACCACCACCACCATGGCTACGAC 956
Query 873 CACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTT 946
|||.|||||.|||||.|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 957 CACCACCCGAAAGAACCGCTCTACAGCCAGCATTCAGCCCACGTCAGATGATCTTGTTTCATCTGCTGAATGTT 1030
Query 947 CAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAGGT-------------------------- 994
||||||||||||||||||||||.||||||||.||.|||||||| ||||
Sbjct 1031 CAAGTGATGATGAAGACTTTGTCGAATGTGAACCAAGTACAGG-AGGTGAATTAGTTATTCCTCTTCTGGTAGA 1103
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1104 AGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGTACCCTCCATTACACTCCCCCCTACCTTCCGCCCCCTCC 1177
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1178 TCACCATTATTGAGACCACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAA 1251
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1252 GGCAGCGATGGTTGTGATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCT 1325
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1326 GCCCCCTACTGATGATGAAGATTTTTACACCACCTTCTCCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCT 1399
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1400 TCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCGGAAACT 1473
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1474 AGTAGAACTACAACCACCTCTTTGTCCCCTGAGCTGATCCGCTTCACAGCGTCCTCCTCGTCTGGGATGGTGCC 1547
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1548 CAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCA 1621
Query 995 ------------------------------------------------------------------------CA 996
||
Sbjct 1622 CTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACA 1695
Query 997 GCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAAC 1070
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||
Sbjct 1696 GCAAACCCCACGGAGCCAGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCCAGCAGTACAAC 1769
Query 1071 AGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACA 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1770 AGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACA 1843
Query 1145 GGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGC 1218
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.|||||||||||||||
Sbjct 1844 GGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGAGGAACTACATCAGCAACTCGGCCCAGAGCAACGGC 1917
Query 1219 ACGCTCATGAAGGAGAAGCAGCAG--AGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGCAT 1290
|||||||||||||||||||| || |||||.|||||||||||.||||||||||||||||||||||.||||.||
Sbjct 1918 ACGCTCATGAAGGAGAAGCA--AGCCAGCTCCAAGAGCGGCCATAAGAAACAGAAAAACAAGGACAAGGAGTAT 1989
Query 1291 TACGTG 1296
||.|||
Sbjct 1990 TATGTG 1995
