Nucleotide Global Alignment
Description
- Query:
- TRCN0000470067
- Subject:
- XM_024449751.1
- Aligned Length:
- 4924
- Identities:
- 1223
- Gaps:
- 3644
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTCCACACTCCACTCGGTTTTCTTCACCCTGAAGGTCAGCATCCTGCTGGGGTCCCTGCTGGGGCTCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGGCCTTGAGTTCATGGGCCTCCCCAACCAGTGGGCCCGCTACCTCCGCTGGGATGCCAGCACACGCAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTGAGTTTCCAGTTCAAGACCAACGTCTCTACGGGGCTGCTCCTCTACCTGGATGATGGCGGCGTCTGCGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCTATGCCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCATGGACTGTGCCGAGACTGCCGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGACCGCCTGCGCACGGTGCTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCTTGATGGCGAGGGCCAGTCTGGGGAGCTGCAGCCCCAGCGGCCCTACATGGATGTGGTCAGTGACTTGTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGGTGGAGTCCCTACTGACATACGACCTTCTGCCCTGACCCTTGATGGAGTTCAGGCCATGCCCGGCTTCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGGTTAATTCTGGATCTCAAGTATGGAAACTCGGAGCCTCGGCTTCTGGGGAGCCGGGGTGTCCAGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGAGGGACCCTGTGGTGAGCGTCCCTGTGAAAATGGTGGGATCTGCTTTCTCCTGGACGGCCACCCCACCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTGTTCTACCACTGGCTATGGTGGCAAGCTCTGCTCAGAAGATGTCAGTCAAGATCCAGGCCTCTCCCACCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATGATGAGTGAACAAGCTCGAGAGGAGAATGTGGCCACTTTCCGAGGCTCAGAGTATCTGTGCTACGACCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCAGAACCCGATCCAGAGCAGCAGTGATGAAATCACCCTCTCCTTTAAGACCTGGCAGCGTAACGGCCTCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCACACGGGCAAGTCGGCTGACTATGTCAACCTGGCTCTGAAGGATGGTGCGGTCTCCTTGGTCATTAACCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGGTCCGGGGCCTTTGAGGCCATTGTGGAGCCAGTGAATGGAAAATTCAACGACAACGCCTGGCATGATGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGTGACACGCAACCTCCGGCAGGTGACAATCTCTGTGGATGGCATTCTTACCACGACGGGCTACACTCAAGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACTATACCATGCTGGGCTCGGACGACTTCTTCTATGTAGGAGGAAGCCCAAGTACCGCTGACTTGCCTGGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCTGTCAGCAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGAATAATGACATCCGTCTGGAGCTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCGCCTGGCCCGGATTGCGGACACCAAGATGAAAATCTATGGCGAAGTTGTGTTTAAGTGTGAGAATGTGGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACTGGACCCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCCCAAGTGGAACACTAAACGTATGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCCATCTCCTTTGACTTCCGCACCACAGAGCCCAATGGCCTGATCCTCTTCACTCATGGAAAGCCCCAAGAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTGCCGTGGAACTCCTCGATGGCAACCTGTAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTCAGAAGAAAGCCAATGATGGGGAATGGTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCATGTGGACATTCAGCGAGATGGCAGATCAGGTACTATATCAGTGAACAGCAGGCGCACGCCATTCACCGCCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGGGGAGAGCGAGATCCTGGACCTGGAAGGAGACATGTACCTGGGAGGGCTGCCGGAGAACCGTGCTGGCCTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTCTCCCCACCGAGCTGTGGACTGCCATGCTCAACTATGGCTACGTGGGCTGCATCCGCGACCTATTCATTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGGCGCAGCAAGAACATTCGACAGCTGGCAGAGATGCAGAATGCTGCGGGTGTCAAGTCCTCCTGTTCACGGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGAGTGCCAAGCAGTGTGACAGCTACCCCTGCAAGAATAATGCTGTGTGCAAGGACGGCTGGAACCGCTTCATC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCGACTGCACCGGCACCGGATACTGGGGAAGAACCTGCGAAAGGGAGGCATCCATCCTGAGCTATGATGGTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATGTACATGAAGATCATCATGCCCATGGTCATGCATACTGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGCGAGCTTATGGGCTGCTGGTGGCTACGACCTCCAGGGACTCTGCCGACACCCTGCGTCTGGAGCTGGATGGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGCGTGTCAAGCTCATGGTTAACTTAGGCAAAGGACCAGAGACCTTGTATGCAGGGCAGAAGCTCAATGACAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGAGTGGCACACCGTTCGGGTGGTGCGGAGAGGAAAAAGCCTTAAGTTAACCGTGGATGATGATGTGGCTGAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTACAATGGTGGGAGACCATACCCGTTTGGAGTTCCACAACATTGAAACGGGAATCATGACTGAGAAACGCTAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATCTCCGTTGTCCCCTCCAGCTTTATTGGCCATCTGCAGAGCCTCATGTTTAATGGCCTTCTCTACATTGACTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTGCAAAAATGGTGACATTGATTATTGTGAGCTGAAGGCTCGTTTTGGACTGAGGAACATCATCGCTGACCCTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCACCTTTAAGACCAAGAGCAGCTACCTGAGCCTTGCCACTCTTCAGGCTTACACCTCCATGCACCTCTTCTTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGTTCAAGACCACCTCACCAGATGGCTTCATTCTCTTCAATAGTGGTGATGGCAATGACTTCATTGCAGTCGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCTTGTCAAGGGGTATATACACTACGTTTTTGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAACAGTGACC 2812
Query 1 ---------ATG--CACCTG----AGAAT-------CCACGCGAGAC----GGAGCCCTCCTCGCC-------G 41
||| .|||.| |.||| .|||.||.||| |.|.|.|||.|.||| |
Sbjct 2813 GCCCCCTGAATGACAACCAGTGGCACAATGTCGTCATCACTCGGGACAATAGTAACACTCATAGCCTGAAAGTG 2886
Query 42 GCCGGCC----TGGACGCTTGGG------------------ATCTGG---------------------TTCCTG 72
|.| .|| |||.|.||..|| |||||| |..|||
Sbjct 2887 GAC-ACCAAAGTGGTCACTCAGGTTATCAATGGTGCCAAAAATCTGGATTTGAAAGGTGATCTCTATATGGCTG 2959
Query 73 TTCTG------GGGATGTA-----------------TCGTCAGCTCT---GTATGGAGTTC------TTCTA-- 112
.|||| ||.||||| ||||...|||| | ||||..||| .||||
Sbjct 2960 GTCTGGCCCAAGGCATGTACAGCAACCTCCCAAAGCTCGTGGCCTCTCGAG-ATGGCTTTCAGGGCTGTCTAGC 3032
Query 113 AT--GTAG-CTT---------CCT------CCTCCTCCA----CCTCTTCCTCGCCGGGGTCTCACTCTCAGCA 164
|| ||.| ||| ||| ||||.||.| .||||||.|||..|.|| .|||..
Sbjct 3033 ATCAGTGGACTTGAATGGACGCCTGCCAGACCTCATCAATGATGCTCTTCATCGGAGCGG--------ACAGAT 3098
Query 165 CGAGC--------------ACCATTTCCA--TGGCAGCAAGCATCACTCA-GTGCCTA------TTTCT----- 210
||||| .|||.|.||| ||.|||.||| |.||| |||||.| ..|||
Sbjct 3099 CGAGCGTGGCTGTGAAGGACCCAGTACCACCTGCCAGGAAG----ATTCATGTGCCAACCAGGGGGTCTGCATG 3168
Query 211 -ATCTATCG------TTCCCCTGT--TTCCCTTCGAGGA-----------GGACAC------------GCTGGC 252
|.|.||.| |||.||||| || .|||.|.|| |||.|| .|||||
Sbjct 3169 CAACAATGGGAGGGCTTCACCTGTGATT--GTTCTATGACCTCTTATTCTGGAAACCAGTGCAATGATCCTGGC 3240
Query 253 GCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCG 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3241 GCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCG 3314
Query 327 GTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3315 GTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAG 3388
Query 401 GACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGAC 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3389 GACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGAC 3462
Query 475 ATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGG 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3463 ATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGG 3536
Query 549 CAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCCGGCAGTTAACCATCTTCA 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3537 CAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATTATCCTACAGGCCGGCAGTTAACCATCTTCA 3610
Query 623 ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3611 ACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTAT 3684
Query 697 TATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3685 TATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCT 3758
Query 771 GGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCA 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3759 GGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCA 3832
Query 845 TGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCA 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3833 TGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCA 3906
Query 919 GATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAG 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3907 GATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAG 3980
Query 993 GT------------------------------------------------------------------------ 994
||
Sbjct 3981 GTCAGGAGGTGAATTAGTTATCCCTCTTCTTGTAGAAGACCCTTTAGCTACCCCTCCTATTGCTACTCGTGCAC 4054
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4055 CTTCCATTACACTCCCCCCTACCTTTCGCCCCCTCCTCACCATTATTGAGACCACCAAAGATTCCCTGTCCATG 4128
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4129 ACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTGATGATGATGGCTTGGTGATATC 4202
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4203 TGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCCTACTGATGATGAAGATTTTTACACCACCTTCT 4276
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4277 CCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCGCCCAAGTGGGAA 4350
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4351 TCCAAGGACTTTAGACCTAACAAAGTCTCCGAAACTAGTAGGACTACTACCACATCTTTATCCCCTGAGCTGAT 4424
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4425 CCGCTTCACAGCTTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGCAAAATGAATAACCGTGATCTCA 4498
Query 995 -------------------------------------------------------------------------- 994
Sbjct 4499 AACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAGACAGCACCAAACTGAAGAGCCCA 4572
Query 995 ----------------------------------CAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGG 1034
||||||||||||||||||||||||||||||||||||||||
Sbjct 4573 CTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCCCACGGAGCCGGGAATCAGACGGGTTCCGGG 4646
Query 1035 GGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCT 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4647 GGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCT 4720
Query 1109 GCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACG 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4721 GCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGGGTCCTATCAAGTGGACGAGACG 4794
Query 1183 CGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4795 CGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGG 4868
Query 1257 CCACAAGAAACAGAAAAACAAGGACAGGGAGCATTACGTG 1296
|||||||||||||||||||||||||||||||.||||||||
Sbjct 4869 CCACAAGAAACAGAAAAACAAGGACAGGGAGTATTACGTG 4908
