Nucleotide Global Alignment
Description
- Query:
- TRCN0000470067
- Subject:
- XM_024449752.1
- Aligned Length:
- 4441
- Identities:
- 1214
- Gaps:
- 3170
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTCCACACTCCACTCGGTTTTCTTCACCCTGAAGGTCAGCATCCTGCTGGGGTCCCTGCTGGGGCTCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGGCCTTGAGTTCATGGGCCTCCCCAACCAGTGGGCCCGCTACCTCCGCTGGGATGCCAGCACACGCAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTGAGTTTCCAGTTCAAGACCAACGTCTCTACGGGGCTGCTCCTCTACCTGGATGATGGCGGCGTCTGCGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCTATGCCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTCAGCATGGACTGTGCCGAGACTGCCGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCCAACAAGCAGGTGAATGACAGCAGCTGGCACTTCCTCATGGTGAGCCGTGACCGCCTGCGCACGGTGCTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCTTGATGGCGAGGGCCAGTCTGGGGAGCTGCAGCCCCAGCGGCCCTACATGGATGTGGTCAGTGACTTGTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGGTGGAGTCCCTACTGACATACGACCTTCTGCCCTGACCCTTGATGGAGTTCAGGCCATGCCCGGCTTCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGGTTAATTCTGGATCTCAAGTATGGAAACTCGGAGCCTCGGCTTCTGGGGAGCCGGGGTGTCCAGATGGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGAGGGACCCTGTGGTGAGCGTCCCTGTGAAAATGGTGGGATCTGCTTTCTCCTGGACGGCCACCCCACCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTGTTCTACCACTGGCTATGGTGGCAAGCTCTGCTCAGAAGATGTCAGTCAAGATCCAGGCCTCTCCCACCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATGATGAGTGAACAAGCTCGAGAGGAGAATGTGGCCACTTTCCGAGGCTCAGAGTATCTGTGCTACGACCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCAGAACCCGATCCAGAGCAGCAGTGATGAAATCACCCTCTCCTTTAAGACCTGGCAGCGTAACGGCCTCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCACACGGGCAAGTCGGCTGACTATGTCAACCTGGCTCTGAAGGATGGTGCGGTCTCCTTGGTCATTAACCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGGTCCGGGGCCTTTGAGGCCATTGTGGAGCCAGTGAATGGAAAATTCAACGACAACGCCTGGCATGATGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGTGACACGCAACCTCCGGCAGCACTCAGGCATCGGACACGCTATGGTGACAATCTCTGTGGATGGCATTCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCACGACGGGCTACACTCAAGAGGACTATACCATGCTGGGCTCGGACGACTTCTTCTATGTAGGAGGAAGCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGTACCGCTGACTTGCCTGGCTCCCCTGTCAGCAACAACTTCATGGGCTGCCTTAAAGAGGTTGTTTATAAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAATGACATCCGTCTGGAGCTGTCTCGCCTGGCCCGGATTGCGGACACCAAGATGAAAATCTATGGCGAAGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTGTTTAAGTGTGAGAATGTGGCCACACTGGACCCCATCAACTTTGAGACCCCAGAGGCTTACATCAGCTTGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAAGTGGAACACTAAACGTATGGGCTCCATCTCCTTTGACTTCCGCACCACAGAGCCCAATGGCCTGATCCTCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCACTCATGGAAAGCCCCAAGAGAGGAAGGATGCTCGGAGCCAGAAGAATACAAAAGTAGACTTCTTTGCCGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAACTCCTCGATGGCAACCTGTACTTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAAAGCCACTCAGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAAAGCCAATGATGGGGAATGGTACCATGTGGACATTCAGCGAGATGGCAGATCAGGTACTATATCAGTGAACA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCAGGCGCACGCCATTCACCGCCAGTGGGGAGAGCGAGATCCTGGACCTGGAAGGAGACATGTACCTGGGAGGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGCCGGAGAACCGTGCTGGCCTTATTCTCCCCACCGAGCTGTGGACTGCCATGCTCAACTATGGCTACGTGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGCATCCGCGACCTATTCATTGATGGGCGCAGCAAGAACATTCGACAGCTGGCAGAGATGCAGAATGCTGCGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGTCAAGTCCTCCTGTTCACGGATGAGTGCCAAGCAGTGTGACAGCTACCCCTGCAAGAATAATGCTGTGTGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAGGACGGCTGGAACCGCTTCATCTGCGACTGCACCGGCACCGGATACTGGGGAAGAACCTGCGAAAGGGAGGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCCATCCTGAGCTATGATGGTAGCATGTACATGAAGATCATCATGCCCATGGTCATGCATACTGAGGCAGAGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGTGTCCTTCCGCTTCATGTCCCAGCGAGCTTATGGGCTGCTGGTGGCTACGACCTCCAGGGACTCTGCCGAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACCCTGCGTCTGGAGCTGGATGGGGGGCGTGTCAAGCTCATGGTTAACTTAGACTGTATCAGGATAAACTGTAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTCCAGCAAAGGACCAGAGACCTTGTATGCAGGGCAGAAGCTCAATGACAACGAGTGGCACACCGTTCGGGTGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGCGGAGAGGAAAAAGCCTTAAGTTAACCGTGGATGATGATGTGGCTGAGGGTACAATGGTGGGAGACCATACC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CGTTTGGAGTTCCACAACATTGAAACGGGAATCATGACTGAGAAACGCTACATCTCCGTTGTCCCCTCCAGCTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TATTGGCCATCTGCAGAGCCTCATGTTTAATGGCCTTCTCTACATTGACTTGTGCAAAAATGGTGACATTGATT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATTGTGAGCTGAAGGCTCGTTTTGGACTGAGGAACATCATCGCTGACCCTGTCACCTTTAAGACCAAGAGCAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TACCTGAGCCTTGCCACTCTTCAGGCTTACACCTCCATGCACCTCTTCTTCCAGTTCAAGACCACCTCACCAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGGCTTCATTCTCTTCAATAGTGGTGATGGCAATGACTTCATTGCAGTCGAGCTTGTCAAGGGGTATATACACT 2812
Query 1 ------------------------------------------------------------ATG--CACCTG--- 9
||| .|||.|
Sbjct 2813 ACGTTTTTGACCTCGGAAACGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATGACAACCAGTGG 2886
Query 10 -AGAAT-------CCACGCGAGAC----GGAGCCCTCCTCGCC-------GGCCGGCC----TGGACGCTTGGG 60
|.||| .|||.||.||| |.|.|.|||.|.||| ||.| .|| |||.|.||..||
Sbjct 2887 CACAATGTCGTCATCACTCGGGACAATAGTAACACTCATAGCCTGAAAGTGGAC-ACCAAAGTGGTCACTCAGG 2959
Query 61 ------------------ATCTGG---------------------TTCCTGTTCTG------GGGATGTA---- 85
|||||| |..|||.|||| ||.|||||
Sbjct 2960 TTATCAATGGTGCCAAAAATCTGGATTTGAAAGGTGATCTCTATATGGCTGGTCTGGCCCAAGGCATGTACAGC 3033
Query 86 -------------TCGTCAGCTCT---GTATGGAGTTC------TTCTA--AT--GTAG-CTT---------CC 123
||||...|||| | ||||..||| .|||| || ||.| ||| ||
Sbjct 3034 AACCTCCCAAAGCTCGTGGCCTCTCGAG-ATGGCTTTCAGGGCTGTCTAGCATCAGTGGACTTGAATGGACGCC 3106
Query 124 T------CCTCCTCCA----CCTCTTCCTCGCCGGGGTCTCACTCTCAGCACGAGC--------------ACCA 173
| ||||.||.| .||||||.|||..|.|| .|||..||||| .|||
Sbjct 3107 TGCCAGACCTCATCAATGATGCTCTTCATCGGAGCGG--------ACAGATCGAGCGTGGCTGTGAAGGACCCA 3172
Query 174 TTTCCA--TGGCAGCAAGCATCACTCA-GTGCCTA------TTTCT------ATCTATCG------TTCCCCTG 226
.|.||| ||.|||.||| |.||| |||||.| ..||| |.|.||.| |||.||||
Sbjct 3173 GTACCACCTGCCAGGAAG----ATTCATGTGCCAACCAGGGGGTCTGCATGCAACAATGGGAGGGCTTCACCTG 3242
Query 227 T--TTCCCTTCGAGGA-----------GGACAC------------GCTGGCGCTACGTACATCTTTGGGAAAAG 275
| || .|||.|.|| |||.|| .||||||||||||||||||||||||||||
Sbjct 3243 TGATT--GTTCTATGACCTCTTATTCTGGAAACCAGTGCAATGATCCTGGCGCTACGTACATCTTTGGGAAAAG 3314
Query 276 TGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCT 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3315 TGGTGGGCTTATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCT 3388
Query 350 TCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTT 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3389 TCAGCACCACTGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTT 3462
Query 424 CACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAAC 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3463 CACATAGAACAGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAAC 3536
Query 498 CCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACA 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3537 CCCTGTAAATGACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACA 3610
Query 572 ACTGGCCAGTGAATGAACATTATCCTAC---------------------------------------------- 599
||||||||||||||||||||||||||||
Sbjct 3611 ACTGGCCAGTGAATGAACATTATCCTACAGGCAACACTGATAATGAACGCTTCCAAATGGTAAAACAGAAAATC 3684
Query 600 --------------------------------------------AGGCCGGCAGTTAACCATCTTCAACACTCA 629
||||||||||||||||||||||||||||||
Sbjct 3685 CCCTTCAAATATAATCGGCCTGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCAGTTAACCATCTTCAACACTCA 3758
Query 630 GGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGATG 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3759 GGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGATG 3832
Query 704 GTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGA 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3833 GTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGA 3906
Query 778 GAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAAAC 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3907 GAAGTCCCATCAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAAAC 3980
Query 852 CACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGATC 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3981 CACTACTACAATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGATC 4054
Query 926 TTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAGGTCAGCA 999
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4055 TTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTA---------CAGCA 4119
Query 1000 AACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGG 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4120 AACCCCACGGAGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGG 4193
Query 1074 GATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGA 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4194 GATGGTCGTCGGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGA 4267
Query 1148 ACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACG 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4268 ACAGGGACGAGGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACG 4341
Query 1222 CTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGCATTACGT 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 4342 CTCATGAAGGAGAAGCAGCAGAGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGTATTACGT 4415
Query 1296 G 1296
|
Sbjct 4416 G 4416
