Nucleotide Global Alignment

Description

Query:
TRCN0000470138
Subject:
XM_017012389.1
Aligned Length:
2379
Identities:
2052
Gaps:
327

Alignment

Query    1  ATGGCCGGCCTGACCTTATTTGTGGGCCGCCTCCCGCCCTCGGCCCGCAGTGAGCAGCTGGAGGAACTGTTCAG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCGGCCTGACCTTATTTGTGGGCCGCCTCCCGCCCTCGGCCCGCAGTGAGCAGCTGGAGGAACTGTTCAG  74

Query   75  TCAGGTGGGGCCGGTGAAGCAGTGCTTCGTGGTGACTGAAAA--------------------------------  116
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct   75  TCAGGTGGGGCCGGTGAAGCAGTGCTTCGTGGTGACTGAAAAAGTTTATGTAGATCAGTGTCCTGTGTCAAAGG  148

Query  117  ----------------------------------------------------------------------AGGG  120
                                                                                  ||||
Sbjct  149  GCTTATACCCTGAAGGAGATTCAAATGCAGTGGAAAGAGAAGCAGAGCATATGAACTATGTGTCCTTTTCAGGG  222

Query  121  AGTAAGGCATGTCGAGGCTTTGGCTATGTCACTTTTTCAATGCTGGAAGATGTTCAGAGGGCCCTCAAGGAGAT  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGTAAGGCATGTCGAGGCTTTGGCTATGTCACTTTTTCAATGCTGGAAGATGTTCAGAGGGCCCTCAAGGAGAT  296

Query  195  TACCACCTTTGAAGGTTGCAAGATCAACGTGACTGTTGCCAAGAAAAAACTGAGGAACAAGACAAAGGAAAAGG  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TACCACCTTTGAAGGTTGCAAGATCAACGTGACTGTTGCCAAGAAAAAACTGAGGAACAAGACAAAGGAAAAGG  370

Query  269  GGAAAAATGAAAACTCAGAGTGCCCAAAGAAGGAGCCGAAGGCTAAAAAAGCCAAAGTGGCAGATAAGAAAGCC  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGAAAAATGAAAACTCAGAGTGCCCAAAGAAGGAGCCGAAGGCTAAAAAAGCCAAAGTGGCAGATAAGAAAGCC  444

Query  343  AGATTAATTATTCGGAACCTGAGCTTTAAGTGTTCAGAAGATGACTTGAAGACAGTATTTGCTCAATTTGGAGC  416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AGATTAATTATTCGGAACCTGAGCTTTAAGTGTTCAGAAGATGACTTGAAGACAGTATTTGCTCAATTTGGAGC  518

Query  417  TGTCCTGGAAGTAAATATCCCTAGGAAACCAGATGGGAAGATGCGCGGTTTTGGTTTTGTTCAGTTCAAAAACC  490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGTCCTGGAAGTAAATATCCCTAGGAAACCAGATGGGAAGATGCGCGGTTTTGGTTTTGTTCAGTTCAAAAACC  592

Query  491  TCCTAGAAGCAGGTAAAGCTCTCAAAGGCATGAACATGAAAGAGATAAAAGGCCGGACAGTGGCTGTGGATTGG  564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCCTAGAAGCAGGTAAAGCTCTCAAAGGCATGAACATGAAAGAGATAAAAGGCCGGACAGTGGCTGTGGATTGG  666

Query  565  GCCGTGGCAAAGGATAAATATAAAGATACACAGTCTGTTTCTGCTATAGGTGAGGAAAAGAGCCATGAATCTAA  638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCCGTGGCAAAGGATAAATATAAAGATACACAGTCTGTTTCTGCTATAGGTGAGGAAAAGAGCCATGAATCTAA  740

Query  639  ACATCAGGAATCAGTTAAAAAGAAGGGCAGAGAGGAAGAGGATATGGAAGAGGAAGAAAACGATGATGATGACG  712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACATCAGGAATCAGTTAAAAAGAAGGGCAGAGAGGAAGAGGATATGGAAGAGGAAGAAAACGATGATGATGACG  814

Query  713  ATGATGATGATGAAGAAGATGGGGTTTTTGATGATGAAGATGAAGAGGAAGAGAATATAGAATCAAAGGTGACC  786
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGATGATGATGAAGAAGATGGGGTTTTTGATGATGAAGATGAAGAGGAAGAGAATATAGAATCAAAGGTGACC  888

Query  787  AAGCCTGTGCAAATTCAGAAGAGAGCAGTCAAGAGACCAGCCCCTGCAAAAAGCAGTGATCATTCTGAGGAGGA  860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGCCTGTGCAAATTCAGAAGAGAGCAGTCAAGAGACCAGCCCCTGCAAAAAGCAGTGATCATTCTGAGGAGGA  962

Query  861  CAGTGACCTAGAGGAAAGCGATAGTATTGATGATGGAGAGGAACTGGCTCAGAGTGATACCAGCACTGAGGAGC  934
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAGTGACCTAGAGGAAAGCGATAGTATTGATGATGGAGAGGAACTGGCTCAGAGTGATACCAGCACTGAGGAGC  1036

Query  935  AAGAGGATAAAGCTGTGCAAGTCTCAAACAAAAAGAAGAGGAAATTACCCTCTGATGTGAATGAAGGGAAAACT  1008
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAGAGGATAAAGCTGTGCAAGTCTCAAACAAAAAGAAGAGGAAATTACCCTCTGATGTGAATGAAGGGAAAACT  1110

Query 1009  GTTTTTATCAGAAATCTGTCCTTTGACTCAGAAGAAGAAGAACTTGGGGAGCTTCTCCAACAGTTTGGAGAACT  1082
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTTTTTATCAGAAATCTGTCCTTTGACTCAGAAGAAGAAGAACTTGGGGAGCTTCTCCAACAGTTTGGAGAACT  1184

Query 1083  CAAATATGTCCGCATTGTCTTGCATCCAGACACAGAGCATTCTAAAGGTTGTGCATTTGCCCAGTTCATGACTC  1156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAAATATGTCCGCATTGTCTTGCATCCAGACACAGAGCATTCTAAAGGTTGTGCATTTGCCCAGTTCATGACTC  1258

Query 1157  AAGAAGCAGCTCAGAAATGCCTTCTAGCTGCTTCTCCAGAGAATGAGGCTGGTGGGCTTAAACTGGATGGCCGG  1230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAGAAGCAGCTCAGAAATGCCTTCTAGCTGCTTCTCCAGAGAATGAGGCTGGTGGGCTTAAACTGGATGGCCGG  1332

Query 1231  CAGCTCAAGGTTGACTTGGCGGTGACCCGTGATGAGGCTGCAAAGCTTCAGACGACGAAGGTGAAGAAGCCGAC  1304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CAGCTCAAGGTTGACTTGGCGGTGACCCGTGATGAGGCTGCAAAGCTTCAGACGACGAAGGTGAAGAAGCCGAC  1406

Query 1305  TGGCACCCGGAATCTCTATCTGGCCCGAGAAGGCTTGATTCGTGCTGGGACGAAGGCTGCAGAGGGTGTGAGTG  1378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGGCACCCGGAATCTCTATCTGGCCCGAGAAGGCTTGATTCGTGCTGGGACGAAGGCTGCAGAGGGTGTGAGTG  1480

Query 1379  CTGCTGATATGGCCAAAAGAGAACGGTTTGAGCTGCTGAAGCATCAGAAACTCAAGGACCAGAATATCTTTGTC  1452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTGCTGATATGGCCAAAAGAGAACGGTTTGAGCTGCTGAAGCATCAGAAACTCAAGGACCAGAATATCTTTGTC  1554

Query 1453  TCCCGAACCAGGCTCTGCCTGCACAATCTCCCAAAGGCTGTAGATGACAAACAGCTCAGAAAGCTGCTGCTGAG  1526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCCCGAACCAGGCTCTGCCTGCACAATCTCCCAAAGGCTGTAGATGACAAACAGCTCAGAAAGCTGCTGCTGAG  1628

Query 1527  TGCTACTAGTGGAGAGAAAGGGGTGCGCATCAAGGAGTGTAGAGTGATGCGAGACCTCAAAGGAGTTCATGGGA  1600
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct 1629  TGCTACTAGTGGAGAGAAAGGGGTGCGCATCAAGGA--------------------------------------  1664

Query 1601  ACATGAAGGGTCAGTCCCTGGGCTACGCCTTTGCGGAGTTCCAAGAGCACGAGCATGCCCTGAAAGCCCTCCGC  1674
                                                                                      
Sbjct 1665  --------------------------------------------------------------------------  1664

Query 1675  CTCATCAACAACAATCCAGAAATCTTTGGGCCTCTGAAGAGACCAATAGTGGAGTTCTCTTTAGAAGATCGAAG  1748
                                                                                      
Sbjct 1665  --------------------------------------------------------------------------  1664

Query 1749  AAAACTTAAAATGAAGGAATTAAGGATCCAGCGCAGCTTGCAAAAAATGAGATCCAAGCCTGCAACTGGTGAGC  1822
                                                   |||||||||||||||||||||||||||||||||||
Sbjct 1665  ---------------------------------------GCAAAAAATGAGATCCAAGCCTGCAACTGGTGAGC  1699

Query 1823  CTCAGAAGGGGCAACCAGAGCCTGCAAAAGACCAGCAACAGAAGGCAGCTCAACACCACACAGAGGAACAAAGC  1896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700  CTCAGAAGGGGCAACCAGAGCCTGCAAAAGACCAGCAACAGAAGGCAGCTCAACACCACACAGAGGAACAAAGC  1773

Query 1897  AAGGTGCCCCCAGAGCAGAAGAGAAAGGCGGGCTCTACCTCATGGACCGGGTTCCAGACCAAGGCTGAAGTGGA  1970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774  AAGGTGCCCCCAGAGCAGAAGAGAAAGGCGGGCTCTACCTCATGGACCGGGTTCCAGACCAAGGCTGAAGTGGA  1847

Query 1971  GCAGGTGGAGCTGCCTGATGGAAAGAAGAGAAGAAAGGTCCTGGCGCTCCCCTCACACCGAGGCCCCAAAATCA  2044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848  GCAGGTGGAGCTGCCTGATGGAAAGAAGAGAAGAAAGGTCCTGGCGCTCCCCTCACACCGAGGCCCCAAAATCA  1921

Query 2045  GGTTGCGGGACAAAGGCAAAGTGAAGCCCGTCCATCCCAAAAAGCCAAAGCCACAGATAAACCAGTGGAAGCAG  2118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922  GGTTGCGGGACAAAGGCAAAGTGAAGCCCGTCCATCCCAAAAAGCCAAAGCCACAGATAAACCAGTGGAAGCAG  1995

Query 2119  GAGAAGCAGCAATTATCGTCCGAGCAGGTATCTAGGAAAAAAGCTAAGGGAAATAAGACGGAAACCCGCTTCAA  2192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996  GAGAAGCAGCAATTATCGTCCGAGCAGGTATCTAGGAAAAAAGCTAAGGGAAATAAGACGGAAACCCGCTTCAA  2069

Query 2193  CCAGCTGGTCGAACAATATAAGCAGAAATTATTGGGACCTTCTAAAGGAGCACCTCTTGCAAAGAGGAGCAAAT  2266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070  CCAGCTGGTCGAACAATATAAGCAGAAATTATTGGGACCTTCTAAAGGAGCACCTCTTGCAAAGAGGAGCAAAT  2143

Query 2267  GGTTTGATAGT  2277
            |||||||||||
Sbjct 2144  GGTTTGATAGT  2154

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