Nucleotide Global Alignment
Description
- Query:
- TRCN0000470230
- Subject:
- XM_017009384.1
- Aligned Length:
- 2081
- Identities:
- 1156
- Gaps:
- 898
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACAAGGGAGAAAAACTTTCCCACGGTTCCGTCTGGCCCGCGGCGCTTGTCTGCCTGCGCGGGGTCAAAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGCCGCCCACGCGCGGCTCGGGTGGGAACCCGCAGACGTGGGGCGAGCAGGGCCGCTGGCTGTGGCGGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCGCCGGGGCGCCACGTCCGAGGCCGCGGGGTCGGGGCTGCAGGCACAGCTCGAGCGCTTTCCGCGGGGTTTG 222
Query 1 --------------------------------AT-----------GAAAAGAAGCAAAGAATTGATAACTAAAA 31
|| ||...|.|||
Sbjct 223 GCTCCTGTCGCTTCCCGTCTCGCCGAACCGGCATCGCCGCCGCCGGAGCCGCAGC------------------- 277
Query 32 ATCATAGTC--AAGAGGAAACAAGTATTCTTCGTTGTTGGAAATGTAGAAAATGTATAGC------AAGCTCTG 97
.|||| .|||| |.|.|.||.|| || .|||.|.|
Sbjct 278 ----GAGTCCTCAGAG------------CCTGGCTGCTG-------------------GCGGCCGGGAGCGCCG 316
Query 98 GTTGTTTTATGGA--------GTATCTTGAGAATC----AAGT-GATTAAGGATAAAGATGATTCAGTTGATGC 158
||| |.|.|..|||..|| |.|| |||..|||||||||||||||||||||||||
Sbjct 317 ----------GGACGGGGCGCGAAGCCGGAGGCTCCGGGACGTGGATACAGGATAAAGATGATTCAGTTGATGC 380
Query 159 TCAAAATATTTGTCATGTGTGGCACATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAG 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 TCAAAATATTTGTCATGTGTGGCACATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAG 454
Query 233 CCCAGTGGACAGTTGGAAAACTGAATTGTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACT 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 CCCAGTGGACAGTTGGAAAACTGAATTGTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACT 528
Query 307 CCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGC 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 CCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGC 602
Query 381 AGGCAGACTAATGAGACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTC 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 AGGCAGACTAATGAGACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTC 676
Query 455 TGCTGACAGGTGGTGGCTCTGAAAACAGAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGA 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 TGCTGACAGGTGGTGGCTCTGAAAACAGAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGA 750
Query 529 AGATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 AGATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAA 824
Query 603 AGCATCAGAACCAAAATACCAGCTTTTTGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATA 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 825 AGCATCAGAACCAAAATACCAGCTTTTTGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATA 898
Query 677 GAAAATCACATAGTTTGGATCTGAACATCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGT 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GAAAATCACATAGTTTGGATCTGAACATCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGT 972
Query 751 AAGACTACTGCCTATTCCAGACTAAATGAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 973 AAGACTACTGCCTATTCCAGACTAAATGAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAA 1046
Query 825 AAATAGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCC 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 AAATAGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCC 1120
Query 899 ATGAGACCCAGACACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 ATGAGACCCAGACACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACT 1194
Query 973 AATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGA 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 AATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGA 1268
Query 1047 AGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATA 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 AGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATA 1342
Query 1121 AGAGAGAAAGGAGCAAGTTGAAGAATCTAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGT 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343 AGAGAGAAAGGAGCAAGTTGAAGAATCTAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGT 1416
Query 1195 AAATACTCAGGAGTGGGATTGCTGGATCATATGGTAAGTATATATTT-----ACTT---ATA------------ 1248
|||||||||||||||||||||||||||||||||.|...| |||.||| |||| |||
Sbjct 1417 AAATACTCAGGAGTGGGATTGCTGGATCATATGTTTTCT-TATGTTTTGCAGACTTTGAATAATGAGATGAGTA 1489
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1490 CAGATGAAGACAATGAATATGCAGAAGAAAAGGATAGCTACATCTGTGCAGTGTGTCTGGACGTTTATTTCAAC 1563
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1564 CCTTATATGTGTTACCCTTGCCATCACATCTTCTGTGAGCCCTGCTTACGGACTCTGGCCAAAGACAATCCTTC 1637
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1638 AAGCACTCCATGCCCATTGTGTCGGACAATTATTTCTAGAGTCTTTTTCCAAACAGAATTGAACAATGCCACAA 1711
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1712 AAACTTTCTTTACTAAAGAATATTTGAAAATAAAACAAAGCTTTCAGAAATCCAACTCTGCAAAATGGCCCCTA 1785
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1786 CCAAGCTGCAGAAAAGCATTTCATCTTTTTGGAGGTTTCCGCAGACATGCAGCTCCAGTTACAAGAAGGCAGTT 1859
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1860 CCCACACGGTGCACACAGGATGGATTACCTGCACTTTGAGGATGATAGCCGTGGATGGTGGTTTGACATGGATA 1933
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1934 TGGTGATCATATATATTTATTCAGTGAACTGGGTCATTGGATTCATTGTTTTCTGCTTTCTTTGCTATTTTTTC 2007
Query 1249 --------- 1248
Sbjct 2008 TTTCCGTTT 2016