Nucleotide Global Alignment
Description
- Query:
- TRCN0000470230
- Subject:
- XM_017009385.1
- Aligned Length:
- 2062
- Identities:
- 1160
- Gaps:
- 878
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACAAGGGAGAAAAACTTTCCCACGGTTCCGTCTGGCCCGCGGCGCTTGTCTGCCTGCGCGGGGTCAAAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGCCGCCCACGCGCGGCTCGGGTGGGAACCCGCAGACGTGGGGCGAGCAGGGCCGCTGGCTGTGGCGGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCGCCGGGGCGCCACGTCCGAGGCCGCGGGGTCGGGGCTGCAGGCACAGCTCGAGCGCTTTCCGCGGGGTTTG 222
Query 1 --------------------------------AT-----------GAAAAGAAGCAAAGAATTGATAACTAAAA 31
|| ||...|.|||
Sbjct 223 GCTCCTGTCGCTTCCCGTCTCGCCGAACCGGCATCGCCGCCGCCGGAGCCGCAGC------------------- 277
Query 32 ATCATAGTC--AAGAGGAAACAAGTATTCTTCGTTGTTGGAAATGTAGAAAATGTATAGC------AAGCTCTG 97
.|||| .|||| |.|.|.||.|| || .|||.|.|
Sbjct 278 ----GAGTCCTCAGAG------------CCTGGCTGCTG-------------------GCGGCCGGGAGCGCCG 316
Query 98 GTTGTTTTATGGA--------GTATCTTGAGAATC----AAGT-GATTAAGGATAAAGATGATTCAGTTGATGC 158
||| |.|.|..|||..|| |.|| |||..|||||||||||||||||||||||||
Sbjct 317 ----------GGACGGGGCGCGAAGCCGGAGGCTCCGGGACGTGGATACAGGATAAAGATGATTCAGTTGATGC 380
Query 159 TCAAAATATTTGTCATGTGTGGCACATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAG 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 TCAAAATATTTGTCATGTGTGGCACATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAG 454
Query 233 CCCAGTGGACAGTTGGAAAACTGAATTGTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACT 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 CCCAGTGGACAGTTGGAAAACTGAATTGTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACT 528
Query 307 CCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGC 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 CCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGC 602
Query 381 AGGCAGACTAATGAGACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTC 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 AGGCAGACTAATGAGACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTC 676
Query 455 TGCTGACAGGTGGTGGCTCTGAAAACAGAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGA 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 TGCTGACAGGTGGTGGCTCTGAAAACAGAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGA 750
Query 529 AGATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 AGATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAA 824
Query 603 AGCATCAGAACCAAAATACCAGCTTTTTGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATA 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 825 AGCATCAGAACCAAAATACCAGCTTTTTGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATA 898
Query 677 GAAAATCACATAGTTTGGATCTGAACATCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGT 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GAAAATCACATAGTTTGGATCTGAACATCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGT 972
Query 751 AAGACTACTGCCTATTCCAGACTAAATGAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 973 AAGACTACTGCCTATTCCAGACTAAATGAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAA 1046
Query 825 AAATAGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCC 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 AAATAGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCC 1120
Query 899 ATGAGACCCAGACACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACT 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 ATGAGACCCAGACACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACT 1194
Query 973 AATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGA 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 AATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGA 1268
Query 1047 AGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATA 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 AGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATA 1342
Query 1121 AGAGAGAAAGGAGCAAGTTGAAGAATCTAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGT 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343 AGAGAGAAAGGAGCAAGTTGAAGAATCTAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGT 1416
Query 1195 AAATACTCAGGAGTGGGATTGCTGGATCATATG-------------------GT-------------------- 1229
||||||||||||||||||||||||||||||||| ||
Sbjct 1417 AAATACTCAGGAGTGGGATTGCTGGATCATATGACTTTGAATAATGAGATGAGTACAGATGAAGACAATGAATA 1490
Query 1230 ----------AAGTATA-----------------------------TATTT----ACTTATA------------ 1248
|||.||| ||||| .||||||
Sbjct 1491 TGCAGAAGAAAAGGATAGCTACATCTGTGCAGTGTGTCTGGACGTTTATTTCAACCCTTATATGTGTTACCCTT 1564
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1565 GCCATCACATCTTCTGTGAGCCCTGCTTACGGACTCTGGCCAAAGACAATCCTTCAAGCACTCCATGCCCATTG 1638
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1639 TGTCGGACAATTATTTCTAGAGTCTTTTTCCAAACAGAATTGAACAATGCCACAAAAACTTTCTTTACTAAAGA 1712
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1713 ATATTTGAAAATAAAACAAAGCTTTCAGAAATCCAACTCTGCAAAATGGCCCCTACCAAGCTGCAGAAAAGCAT 1786
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1787 TTCATCTTTTTGGAGGTTTCCGCAGACATGCAGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCACACAGG 1860
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1861 ATGGATTACCTGCACTTTGAGGATGATAGCCGTGGATGGTGGTTTGACATGGATATGGTGATCATATATATTTA 1934
Query 1249 ---------------------------------------------------------------- 1248
Sbjct 1935 TTCAGTGAACTGGGTCATTGGATTCATTGTTTTCTGCTTTCTTTGCTATTTTTTCTTTCCGTTT 1998
