Nucleotide Global Alignment

Description

Query:
TRCN0000470230
Subject:
XM_017009385.1
Aligned Length:
2062
Identities:
1160
Gaps:
878

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACAAGGGAGAAAAACTTTCCCACGGTTCCGTCTGGCCCGCGGCGCTTGTCTGCCTGCGCGGGGTCAAAGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCGCCGCCCACGCGCGGCTCGGGTGGGAACCCGCAGACGTGGGGCGAGCAGGGCCGCTGGCTGTGGCGGGCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCGCCGGGGCGCCACGTCCGAGGCCGCGGGGTCGGGGCTGCAGGCACAGCTCGAGCGCTTTCCGCGGGGTTTG  222

Query    1  --------------------------------AT-----------GAAAAGAAGCAAAGAATTGATAACTAAAA  31
                                            ||           ||...|.|||                   
Sbjct  223  GCTCCTGTCGCTTCCCGTCTCGCCGAACCGGCATCGCCGCCGCCGGAGCCGCAGC-------------------  277

Query   32  ATCATAGTC--AAGAGGAAACAAGTATTCTTCGTTGTTGGAAATGTAGAAAATGTATAGC------AAGCTCTG  97
                .||||  .||||            |.|.|.||.||                   ||      .|||.|.|
Sbjct  278  ----GAGTCCTCAGAG------------CCTGGCTGCTG-------------------GCGGCCGGGAGCGCCG  316

Query   98  GTTGTTTTATGGA--------GTATCTTGAGAATC----AAGT-GATTAAGGATAAAGATGATTCAGTTGATGC  158
                      |||        |.|.|..|||..||    |.|| |||..|||||||||||||||||||||||||
Sbjct  317  ----------GGACGGGGCGCGAAGCCGGAGGCTCCGGGACGTGGATACAGGATAAAGATGATTCAGTTGATGC  380

Query  159  TCAAAATATTTGTCATGTGTGGCACATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAG  232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  381  TCAAAATATTTGTCATGTGTGGCACATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGCCTAATCCAAAAAG  454

Query  233  CCCAGTGGACAGTTGGAAAACTGAATTGTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACT  306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  455  CCCAGTGGACAGTTGGAAAACTGAATTGTCCTTTCTGTGGGGCCCGTTTAGGGGGCTTTAATTTTGTCAGCACT  528

Query  307  CCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGC  380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  529  CCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGC  602

Query  381  AGGCAGACTAATGAGACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTC  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  603  AGGCAGACTAATGAGACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTC  676

Query  455  TGCTGACAGGTGGTGGCTCTGAAAACAGAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGA  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  677  TGCTGACAGGTGGTGGCTCTGAAAACAGAAATCACAGGCTTTTAAACATGGCCCGAAATAATAATGACCCTGGA  750

Query  529  AGATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAA  602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  751  AGATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAA  824

Query  603  AGCATCAGAACCAAAATACCAGCTTTTTGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATA  676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  825  AGCATCAGAACCAAAATACCAGCTTTTTGTTCCCCAGCTTGTGACTGGCAGATGCGCTACAAGAGCTTTTCATA  898

Query  677  GAAAATCACATAGTTTGGATCTGAACATCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGT  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  899  GAAAATCACATAGTTTGGATCTGAACATCAGTGAGAAACTGACTTTATTACCCACTTTATATGAAATACATAGT  972

Query  751  AAGACTACTGCCTATTCCAGACTAAATGAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAA  824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  973  AAGACTACTGCCTATTCCAGACTAAATGAAACACAGCCTATTGACCTTTCAGGCTTGCCTTTACAATCTAGTAA  1046

Query  825  AAATAGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCC  898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047  AAATAGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGCCCCCC  1120

Query  899  ATGAGACCCAGACACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACT  972
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121  ATGAGACCCAGACACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACT  1194

Query  973  AATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGA  1046
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195  AATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGA  1268

Query 1047  AGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATA  1120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269  AGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATA  1342

Query 1121  AGAGAGAAAGGAGCAAGTTGAAGAATCTAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGT  1194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343  AGAGAGAAAGGAGCAAGTTGAAGAATCTAAGAAGGAAACAACGAAGGCGTGAAAGATGGCTACAGAAGCAGGGT  1416

Query 1195  AAATACTCAGGAGTGGGATTGCTGGATCATATG-------------------GT--------------------  1229
            |||||||||||||||||||||||||||||||||                   ||                    
Sbjct 1417  AAATACTCAGGAGTGGGATTGCTGGATCATATGACTTTGAATAATGAGATGAGTACAGATGAAGACAATGAATA  1490

Query 1230  ----------AAGTATA-----------------------------TATTT----ACTTATA------------  1248
                      |||.|||                             |||||    .||||||            
Sbjct 1491  TGCAGAAGAAAAGGATAGCTACATCTGTGCAGTGTGTCTGGACGTTTATTTCAACCCTTATATGTGTTACCCTT  1564

Query 1249  --------------------------------------------------------------------------  1248
                                                                                      
Sbjct 1565  GCCATCACATCTTCTGTGAGCCCTGCTTACGGACTCTGGCCAAAGACAATCCTTCAAGCACTCCATGCCCATTG  1638

Query 1249  --------------------------------------------------------------------------  1248
                                                                                      
Sbjct 1639  TGTCGGACAATTATTTCTAGAGTCTTTTTCCAAACAGAATTGAACAATGCCACAAAAACTTTCTTTACTAAAGA  1712

Query 1249  --------------------------------------------------------------------------  1248
                                                                                      
Sbjct 1713  ATATTTGAAAATAAAACAAAGCTTTCAGAAATCCAACTCTGCAAAATGGCCCCTACCAAGCTGCAGAAAAGCAT  1786

Query 1249  --------------------------------------------------------------------------  1248
                                                                                      
Sbjct 1787  TTCATCTTTTTGGAGGTTTCCGCAGACATGCAGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCACACAGG  1860

Query 1249  --------------------------------------------------------------------------  1248
                                                                                      
Sbjct 1861  ATGGATTACCTGCACTTTGAGGATGATAGCCGTGGATGGTGGTTTGACATGGATATGGTGATCATATATATTTA  1934

Query 1249  ----------------------------------------------------------------  1248
                                                                            
Sbjct 1935  TTCAGTGAACTGGGTCATTGGATTCATTGTTTTCTGCTTTCTTTGCTATTTTTTCTTTCCGTTT  1998

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