Nucleotide Global Alignment

Description

• Query: TRCN0000470249
• Subject: NM_001135036.1
• Aligned Length: 860
• Identities: 552
• Gaps: 283

Alignment

Query   1  ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCACTGTTTGATGCGGAAGAGGAGACGACTAATAG  74

Query  75  ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  ACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTTTTTCCACTTATTCTTTCGAGTCAGTGCAATCATCG  148

Query 149  TCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGT  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  TCTGTCTTCTCTGTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTTACAATTATCTTGTTGTTGTCGTGT  222

Query 223  GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  GACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGA  296

Query 297  TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297  TGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAAT  370

Query 371  CAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCC  444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371  CAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTACTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCC  444

Query 445  TTCACAGTAAAGTGGCTGAGACGGT--CTCGCCACATTGCCCAGACTGGTCTGAAAGTCTTGGGCT-CAAGAGA  515
           |||||||||||||||||  |.||||  .|      |||       .|||       ||.|.|.||| ||||   
Sbjct 445  TTCACAGTAAAGTGGCT--GGCGGTGGTT------ATT-------ATGG-------GTGTGGTGCTACAAG---  493

Query 516  TCCTCCCGCTTCCGCCTTCCAAAGCGCTG---GG--ATAACAGGCGTGAG--CCGCTGCCCGGGCCATCCCTCG  582
                          .|.||||   .|||   ||  |.|.||||.||.||  .|||.||               
Sbjct 494  ---------------GTGCCAA---CCTGTATGGTTACATCAGGTGTAAGGTGCGCAGC---------------  534

Query 583  AGTAAG--TTTCATCAGGTAGACAT---TAATTC-----------------TTTCACGAGGATCACGGATCGAG  634
           ||.|||  |||.|.|||     |||   ||.|||                 |||.|.||    ||.|.|   ||
Sbjct 535  AGAAAGCATTTAACCAG-----CATGGCTACTTCATATTTTGGAAAGCAGTTTTTAAGA----CAAGTA---AG  596

Query 635  CTCTTTACTGGAAACCTGCGCCCCGCCTTAGTTCTCCACCTCTTCGTGCGGCTCCAGGCAACTGCCAACAGATG  708
            |.|||.|||||    ||                                                        
Sbjct 597  -TGTTTTCTGGA----TG--------------------------------------------------------  609

Query 709  GCGCCCGCCCGCCTATTTCTCTCCTTGCGGCTTTGGGCCTGGAGGGGAGGTGGGGAGAGTCCCAATAGCAGAGG  782
                                                                                     
Sbjct 610  --------------------------------------------------------------------------  609

Query 783  AACTGGTGAGCCCGGGCCAAAATTTCATCTGGCATCCGGAATGCAT  828
                                                         
Sbjct 610  ----------------------------------------------  609