Nucleotide Global Alignment

Description

• Query: TRCN0000470264
• Subject: XM_024446892.1
• Aligned Length: 1445
• Identities: 861
• Gaps: 565

Alignment

Query    1  ATGAGAGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG  74
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGCGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG  74

Query   75  ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC  148

Query  149  CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC  222

Query  223  AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC  296

Query  297  AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC  370

Query  371  AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGAATGATTTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGAATGATTTT  444

Query  445  GACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAATA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAATA  518

Query  519  CTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAACTGAAAGCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAACTGAAAGCA  592

Query  593  GAGTATTAAAGAACACTAGACATCCCTTTTTAACATCCTTGAANTATNCNTNCCAGANAAAAGACNGTTTGTGT  666
            |||||||||||||||||||||||||||||||||||||||||||.|||.|.|.|||||.|||||||.||||||||
Sbjct  593  GAGTATTAAAGAACACTAGACATCCCTTTTTAACATCCTTGAAATATTCCTTCCAGACAAAAGACCGTTTGTGT  666

Query  667  TTTGTGATGGAATATGTTANNGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGACCG  740
            |||||||||||||||||||..|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTTGTGATGGAATATGTTAATGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGACCG  740

Query  741  CACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATTCCCGGNAAGATTTGTGGTACCGTG  814
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||.|||| |||| ||||||||
Sbjct  741  CACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATT-CCGGAAAGA-TTGT-GTACCGTG  811

Query  815  ATCTCAA--GTTGGAGAATCTAATGCTGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTTGCAAAG  886
            |||||||  |||||      ||.|.||                       |||             ||.|||||
Sbjct  812  ATCTCAAGGGTTGG------TATTTCT-----------------------TTA-------------TTACAAAG  843

Query  887  AAGGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGC---ACCAGAGGTGTTA  957
            ||          .||||        .|||                 ||.|||||  ||   |||       |||
Sbjct  844  AA----------CTGCA--------AAAG-----------------AGGATATC--GCCTTACC-------TTA  873

Query  958  GAAGATAATGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGGGAG  1031
            .||.|||| ||.|                                                             
Sbjct  874  CAAAATAA-GATT-------------------------------------------------------------  885

Query 1032  GTTACCTTTCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTCGAA  1105
                                                                                      
Sbjct  886  --------------------------------------------------------------------------  885

Query 1106  CACTCTCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGA  1179
                                                                                      
Sbjct  886  --------------------------------------------------------------------------  885

Query 1180  CCAGATGATGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAAAAA  1253
                                                                                      
Sbjct  886  --------------------------------------------------------------------------  885

Query 1254  GCTTGTACCTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAGCTC  1327
                                                                                      
Sbjct  886  --------------------------------------------------------------------------  885

Query 1328  AGACTATTACAATAACACCACCTGAAAAATATGATGAGGATGGTATGGACTGCATGGACAATGAGAGGCGGCCG  1401
                                                                                      
Sbjct  886  --------------------------------------------------------------------------  885

Query 1402  CATTTCCCTCAATTTTCCTACTCTGCAAGTGGACGAGAA  1440
                                                   
Sbjct  886  ---------------------------------------  885