Nucleotide Global Alignment
Description
- Query:
- TRCN0000470280
- Subject:
- XM_006539647.3
- Aligned Length:
- 2158
- Identities:
- 1124
- Gaps:
- 965
Alignment
Query 1 ATGGTTCACTC-----CAGC-----------ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCG 58
|||| | |||| |||||.||..| |||||||||||||||||||||||||||||||
Sbjct 1 ATGG------CGAAGACAGCGGCGCCTACCGATGGGAGCAGC-GAAATAAGAATGTCTAAGCCCCTGGAGGCCG 67
Query 59 AGAAGCAAGGTCTGGACTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAAC 132
||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||.|||.|||||||||
Sbjct 68 AGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAAC 141
Query 133 CCCCAAAATAAGACCTCCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA---------------------- 184
|||||.|||||..|.|||||||||||.||||||||||||||||||||.||.|
Sbjct 142 CCCCAGAATAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCT 215
Query 185 --------------------------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATT 214
||||||||||||||||||||||||||||||
Sbjct 216 CCACTTAACATTCTGGGGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATT 289
Query 215 CAGCCCCAGCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGC 288
||||||||||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.||||||||
Sbjct 290 CAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGCTGACGGGC 363
Query 289 AGCCAGCTAGCTGG------------------------------------------------------------ 302
||||||||||||||
Sbjct 364 AGCCAGCTAGCTGGGCTCTCAGCACTGATACCTGCTCAGCAGCAACTCCTCCTTCAGCAAGCTCAGGCCCAGCT 437
Query 303 -------------------------------------------------------------------------- 302
Sbjct 438 GCTGGCCGCTGCCGTCCAGCAGTCCAGCGCCGCTGCCGCCAACGCTGCTGCTGCCGCCGCTGCCGCCTCCACCT 511
Query 303 -------------------------------------------------------------------------- 302
Sbjct 512 CCTCCTCCACCTCTTCCGCCTCCTCCTCCACCTCGCAGACCCCAGCCTCCTCTGGGGGAGGCGACCTGCCACCA 585
Query 303 -----------------------------------------------------------------------GGA 305
|||
Sbjct 586 TCACAGCCTACCAGCCAGCCCCCAGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACAGCACAGGA 659
Query 306 CATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTTCC 379
|||||||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 660 CATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCC 733
Query 380 TGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAACC 453
||||.||.|||||.||||||||.|||||||||||||||||.||.|||||||||||||||||||||||.||||||
Sbjct 734 TGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAACAAACC 807
Query 454 CAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA----------------------------- 498
|||||||||||.||||||||||||||||||||.||||||||.|||
Sbjct 808 CAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGGCTATGACTCGCCCCACGCTGCCCGA 881
Query 499 -------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCTGG 553
||||||||.||||||||||||||.||.||||||||.|||||||||||.|||||||
Sbjct 882 CCCACACCTCTCACACCCGCAGCCCCCGAAATGCTTGGAGCCGCCCTCCCACCCGGAGGAGCCCAGCGATCTGG 955
Query 554 AGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGGGC 627
||||||||||.||.||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 956 AGGAGCTGGAACAGTTTGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGC 1029
Query 628 CTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAG 701
||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1030 CTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAG 1103
Query 702 CTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGACT 775
|||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|
Sbjct 1104 CTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATT 1177
Query 776 CAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCAAG 849
|||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||.||.||||||||||||
Sbjct 1178 CAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAG 1251
Query 850 AAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCTC 923
||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1252 AAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTC 1325
Query 924 AGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGC 997
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1326 AGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGC 1399
Query 998 GCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCTAC 1071
|||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||.||||||||
Sbjct 1400 GCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACCAGCTAC 1473
Query 1072 AGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGCA- 1144
|||||.||..||||||||||||||||||||||.|||||||||||.||||||||||||||.|||||||||||||
Sbjct 1474 AGCCCTCACCTGGTCACACCCCAAGGGGGCGCAGGGACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCAC 1547
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1548 AACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCATCCCAGCCGGACAGCAGGAGGGGGTGGGGGTGGGG 1621
Query 1145 -------------------------------------------------------------CAACAGCACAAAC 1157
|||||||||||||
Sbjct 1622 GCGGAGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAAC 1695
Query 1158 CCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC------------------------------- 1200
||.||||||||||||||||||||||||||.||||||||.||||
Sbjct 1696 CCGAGCCCTCAAGGCAGCCACTCGGCTATTGGCTTGTCGGGCCTGAACCCCAGCGCGGGAAGCACAATGGTGGG 1769
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1770 GTTGAGCTCTGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGCCTCTGGTG 1843
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1844 GAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGT 1917
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1918 CCCAGCTTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGTCTGCCGCTGCTCAGTGCCCCACCAGGCGTGGG 1991
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1992 CCTGGTCTCAGCGGCGGCTGCAGCCGTAGCAGCATCCATCTCCAGCAAGTCTCCTGGCCTCTCCTCGTCTTCTT 2065
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 2066 CATCCTCATCATCCTCCACGTGCAGTGATGTGGCAGCACAGACCCCTGGAGGCCCCGGAGGACCCGAGGCGGGG 2139
Query 1201 ------------ 1200
Sbjct 2140 TCCAAGGCTGAG 2151
