Nucleotide Global Alignment
Description
- Query:
- TRCN0000470280
- Subject:
- XM_006539648.2
- Aligned Length:
- 2142
- Identities:
- 1133
- Gaps:
- 942
Alignment
Query 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1 ATGGTTCATTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGA 74
Query 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
||||||.||||||||||||||||||||||||||||||||.||||.|||.||||||||||||||.|||||..|.|
Sbjct 75 CTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAATAAAGCGT 148
Query 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA-------------------------------------- 184
||||||||||.||||||||||||||||||||.||.|
Sbjct 149 CCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCTCCACTTAACATTCTGG 222
Query 185 ----------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 230
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 296
Query 231 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGG-- 302
||.||||||.||||||||.||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 297 CCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGCTGACGGGCAGCCAGCTAGCTGGGC 370
Query 303 -------------------------------------------------------------------------- 302
Sbjct 371 TCTCAGCACTGATACCTGCTCAGCAGCAACTCCTCCTTCAGCAAGCTCAGGCCCAGCTGCTGGCCGCTGCCGTC 444
Query 303 -------------------------------------------------------------------------- 302
Sbjct 445 CAGCAGTCCAGCGCCGCTGCCGCCAACGCTGCTGCTGCCGCCGCTGCCGCCTCCACCTCCTCCTCCACCTCTTC 518
Query 303 -------------------------------------------------------------------------- 302
Sbjct 519 CGCCTCCTCCTCCACCTCGCAGACCCCAGCCTCCTCTGGGGGAGGCGACCTGCCACCATCACAGCCTACCAGCC 592
Query 303 -------------------------------------------------------GGACATACAGCAGCTCCTC 321
||||||||||||.||||||
Sbjct 593 AGCCCCCAGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACAGCACAGGACATACAGCAACTCCTC 666
Query 322 CAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTACCGCAGGCCCA 395
|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||.||.|||||.||
Sbjct 667 CAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAGGCACA 740
Query 396 GCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTCTTCTGA 469
||||||.|||||||||||||||||.||.|||||||||||||||||||||||.|||||||||||||||||.||||
Sbjct 741 GCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAACAAACCCAGGGAGCTCTCCTGA 814
Query 470 CCTCCCAGCCCCGGGCCGGGCTTCCCACA--------------------------------------------- 498
||||||||||||||||.||||||||.|||
Sbjct 815 CCTCCCAGCCCCGGGCTGGGCTTCCTACACAGGCTATGACTCGCCCCACGCTGCCCGACCCACACCTCTCACAC 888
Query 499 ---CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCTGGAGGAGCTGGAGCAATT 569
||||||||.||||||||||||||.||.||||||||.|||||||||||.|||||||||||||||||.||.||
Sbjct 889 CCGCAGCCCCCGAAATGCTTGGAGCCGCCCTCCCACCCGGAGGAGCCCAGCGATCTGGAGGAGCTGGAACAGTT 962
Query 570 CGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGGGCCTGGCCATGGGCAAGC 643
.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 963 TGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGC 1036
Query 644 TCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGC 717
||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1037 TCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGT 1110
Query 718 AAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGACTCAAGCCTGCCCAGCCC 791
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||||||||
Sbjct 1111 AAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCC 1184
Query 792 CAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCAAGAAGAGGACCAGCATCG 865
.|||||||||||||||||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||||
Sbjct 1185 AAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCG 1258
Query 866 AGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTG 939
||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTG 1332
Query 940 ATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACG 1013
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATCGCAGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACG 1406
Query 1014 CATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCTACAGCCCCCATATGGTCA 1087
|||||||||.|||||||||||||||||||||||||||||.||.||||||.|||||||||||||.||..||||||
Sbjct 1407 CATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACCAGCTACAGCCCTCACCTGGTCA 1480
Query 1088 CACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGCA----------------- 1144
||||||||||||||||.|||||||||||.||||||||||||||.|||||||||||||
Sbjct 1481 CACCCCAAGGGGGCGCAGGGACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTA 1554
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1555 TCCTCAGCTGTGGGGACGCTCCATCCCAGCCGGACAGCAGGAGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCC 1628
Query 1145 ---------------------------------------------CAACAGCACAAACCCCAGCCCTCAAGGCA 1173
|||||||||||||||.|||||||||||||
Sbjct 1629 CCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCA 1702
Query 1174 GCCACTCGGCTATCGGCTTGTCAGGCC----------------------------------------------- 1200
|||||||||||||.||||||||.||||
Sbjct 1703 GCCACTCGGCTATTGGCTTGTCGGGCCTGAACCCCAGCGCGGGAAGCACAATGGTGGGGTTGAGCTCTGGGCTG 1776
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1777 AGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTAC 1850
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1851 CAGCCTTGATGGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCT 1924
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1925 CGCCTCTCTTCTTGAACCACACCGGTCTGCCGCTGCTCAGTGCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCG 1998
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1999 GCTGCAGCCGTAGCAGCATCCATCTCCAGCAAGTCTCCTGGCCTCTCCTCGTCTTCTTCATCCTCATCATCCTC 2072
Query 1201 ---------------------------------------------------------------------- 1200
Sbjct 2073 CACGTGCAGTGATGTGGCAGCACAGACCCCTGGAGGCCCCGGAGGACCCGAGGCGGGGTCCAAGGCTGAG 2142
