Nucleotide Global Alignment
Description
- Query:
- TRCN0000470280
- Subject:
- XM_006539651.3
- Aligned Length:
- 2110
- Identities:
- 1124
- Gaps:
- 917
Alignment
Query 1 ATGGTTCACTC-----CAGC-----------ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCG 58
|||| | |||| |||||.||..| |||||||||||||||||||||||||||||||
Sbjct 1 ATGG------CGAAGACAGCGGCGCCTACCGATGGGAGCAGC-GAAATAAGAATGTCTAAGCCCCTGGAGGCCG 67
Query 59 AGAAGCAAGGTCTGGACTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAAC 132
||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||.|||.|||||||||
Sbjct 68 AGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAAC 141
Query 133 CCCCAAAATAAGACCTCCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA---------------------- 184
|||||.|||||..|.|||||||||||.||||||||||||||||||||.||.|
Sbjct 142 CCCCAGAATAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCT 215
Query 185 --------------------------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATT 214
||||||||||||||||||||||||||||||
Sbjct 216 CCACTTAACATTCTGGGGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATT 289
Query 215 CAGCCCCAGCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGC 288
||||||||||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.||||||||
Sbjct 290 CAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGCTGACGGGC 363
Query 289 AGCCAGCTAGCTGG------------------------------------------------------------ 302
||||||||||||||
Sbjct 364 AGCCAGCTAGCTGGGCTCTCAGCACTGATACCTGCTCAGCAGCAACTCCTCCTTCAGCAAGCTCAGGCCCAGCT 437
Query 303 -------------------------------------------------------------------------- 302
Sbjct 438 GCTGGCCGCTGCCGTCCAGCAGTCCAGCGCCGCTGCCGCCAACGCTGCTGCTGCCGCCGCTGCCGCCTCCACCT 511
Query 303 -------------------------------------------------------------------------- 302
Sbjct 512 CCTCCTCCACCTCTTCCGCCTCCTCCTCCACCTCGCAGACCCCAGCCTCCTCTGGGGGAGGCGACCTGCCACCA 585
Query 303 -----------------------------------------------------------------------GGA 305
|||
Sbjct 586 TCACAGCCTACCAGCCAGCCCCCAGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACAGCACAGGA 659
Query 306 CATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTTCC 379
|||||||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 660 CATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCC 733
Query 380 TGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAACC 453
||||.||.|||||.||||||||.|||||||||||||||||.||.|||||||||||||||||||||||.||||||
Sbjct 734 TGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAACAAACC 807
Query 454 CAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACACAGCCCCCCAAATGCTTGGAGCCACCATC 527
|||||||||||.||||||||||||||||||||.||||||||.|||||||||||.||||||||||||||.||.||
Sbjct 808 CAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCCCCCGAAATGCTTGGAGCCGCCCTC 881
Query 528 CCACCCCGAGGAGCCCAGTGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGC 601
||||||.|||||||||||.|||||||||||||||||.||.||.||.||||||||||||||||||||||||||||
Sbjct 882 CCACCCGGAGGAGCCCAGCGATCTGGAGGAGCTGGAACAGTTTGCTCGCACCTTCAAGCAACGCCGCATCAAGC 955
Query 602 TGGGCTTCACGCAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATT 675
||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 956 TGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATT 1029
Query 676 TCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAA 749
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1030 TCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAA 1103
Query 750 CGATGCAGAGACTATGTCTGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCG 823
|||.||||||||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 1104 CGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCG 1177
Query 824 ACGGCCTGCCCGGCCGGAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGT 897
||||.|||||.||.||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct 1178 ACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGT 1251
Query 898 TTTCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGT 971
||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1252 TTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGAGAAGGAAGT 1325
Query 972 GATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGC 1045
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1326 GATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGC 1399
Query 1046 CCAGCCCAGGGAAGCCGGCCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTG 1119
|||||||.||.||||||.|||||||||||||.||..||||||||||||||||||||||.|||||||||||.|||
Sbjct 1400 CCAGCCCGGGAAAGCCGACCAGCTACAGCCCTCACCTGGTCACACCCCAAGGGGGCGCAGGGACCTTACCATTG 1473
Query 1120 TCCCAAGCTTCCAGCAGTCTGAGCA------------------------------------------------- 1144
|||||||||||.|||||||||||||
Sbjct 1474 TCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCATCCCAGCCG 1547
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1548 GACAGCAGGAGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCAC 1621
Query 1145 -------------CAACAGCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC----- 1200
|||||||||||||||.||||||||||||||||||||||||||.||||||||.||||
Sbjct 1622 CCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATTGGCTTGTCGGGCCTGAAC 1695
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1696 CCCAGCGCGGGAAGCACAATGGTGGGGTTGAGCTCTGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGC 1769
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1770 CACTATCCAAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAACCTGGTGCTGG 1843
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1844 GGGCAGCCGGTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGTCTGCCG 1917
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1918 CTGCTCAGTGCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCGGCTGCAGCCGTAGCAGCATCCATCTCCAGCAA 1991
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1992 GTCTCCTGGCCTCTCCTCGTCTTCTTCATCCTCATCATCCTCCACGTGCAGTGATGTGGCAGCACAGACCCCTG 2065
Query 1201 -------------------------------------- 1200
Sbjct 2066 GAGGCCCCGGAGGACCCGAGGCGGGGTCCAAGGCTGAG 2103
