Nucleotide Global Alignment

Description

Query:
TRCN0000470280
Subject:
XM_006539654.3
Aligned Length:
1813
Identities:
1124
Gaps:
620

Alignment

Query    1  ATGGTTCACTC-----CAGC-----------ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCG  58
            ||||      |     ||||           |||||.||..| |||||||||||||||||||||||||||||||
Sbjct    1  ATGG------CGAAGACAGCGGCGCCTACCGATGGGAGCAGC-GAAATAAGAATGTCTAAGCCCCTGGAGGCCG  67

Query   59  AGAAGCAAGGTCTGGACTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAAC  132
            ||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||.|||.|||||||||
Sbjct   68  AGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAAC  141

Query  133  CCCCAAAATAAGACCTCCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGATCAAGGCTGAAGACCCCAG  206
            |||||.|||||..|.|||||||||||.||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct  142  CCCCAGAATAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAG  215

Query  207  TGGCGATTCAGCCCCAGCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGT  280
            ||||||||||||||||||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.
Sbjct  216  TGGCGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGC  289

Query  281  TGACGGGCAGCCAGCTAGCTGGGGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCAC  354
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||
Sbjct  290  TGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCAC  363

Query  355  CACCTCCAGCCACCTGCTCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAA  428
            |||||||||||||||||||||||||||||.||.|||||.||||||||.|||||||||||||||||.||.|||||
Sbjct  364  CACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAA  437

Query  429  TCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA----  498
            ||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||    
Sbjct  438  TCTATTCCAGCTACCTCAACAAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGG  511

Query  499  --------------------------------------------CAGCCCCCCAAATGCTTGGAGCCACCATCC  528
                                                        ||||||||.||||||||||||||.||.|||
Sbjct  512  CTATGACTCGCCCCACGCTGCCCGACCCACACCTCTCACACCCGCAGCCCCCGAAATGCTTGGAGCCGCCCTCC  585

Query  529  CACCCCGAGGAGCCCAGTGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCT  602
            |||||.|||||||||||.|||||||||||||||||.||.||.||.|||||||||||||||||||||||||||||
Sbjct  586  CACCCGGAGGAGCCCAGCGATCTGGAGGAGCTGGAACAGTTTGCTCGCACCTTCAAGCAACGCCGCATCAAGCT  659

Query  603  GGGCTTCACGCAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTT  676
            |||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct  660  GGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTT  733

Query  677  CCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAAC  750
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  734  CCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAAC  807

Query  751  GATGCAGAGACTATGTCTGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGA  824
            ||.||||||||||||||||||||.||||||||.||||||||.||||||||||||||||||||||||||||||||
Sbjct  808  GACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGA  881

Query  825  CGGCCTGCCCGGCCGGAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTT  898
            |||.|||||.||.||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||
Sbjct  882  CGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTT  955

Query  899  TTCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTG  972
            |.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  956  TCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGAGAAGGAAGTG  1029

Query  973  ATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCC  1046
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1030  ATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCC  1103

Query 1047  CAGCCCAGGGAAGCCGGCCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGT  1120
            ||||||.||.||||||.|||||||||||||.||..||||||||||||||||||||||.|||||||||||.||||
Sbjct 1104  CAGCCCGGGAAAGCCGACCAGCTACAGCCCTCACCTGGTCACACCCCAAGGGGGCGCAGGGACCTTACCATTGT  1177

Query 1121  CCCAAGCTTCCAGCAGTCTGAGCA--------------------------------------------------  1144
            ||||||||||.|||||||||||||                                                  
Sbjct 1178  CCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCATCCCAGCCGG  1251

Query 1145  --------------------------------------------------------------------------  1144
                                                                                      
Sbjct 1252  ACAGCAGGAGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACC  1325

Query 1145  ------------CAACAGCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC------  1200
                        |||||||||||||||.||||||||||||||||||||||||||.||||||||.||||      
Sbjct 1326  CCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATTGGCTTGTCGGGCCTGAACC  1399

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1400  CCAGCGCGGGAAGCACAATGGTGGGGTTGAGCTCTGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCC  1473

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1474  ACTATCCAAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAACCTGGTGCTGGG  1547

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1548  GGCAGCCGGTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGTCTGCCGC  1621

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1622  TGCTCAGTGCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCGGCTGCAGCCGTAGCAGCATCCATCTCCAGCAAG  1695

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1696  TCTCCTGGCCTCTCCTCGTCTTCTTCATCCTCATCATCCTCCACGTGCAGTGATGTGGCAGCACAGACCCCTGG  1769

Query 1201  -------------------------------------  1200
                                                 
Sbjct 1770  AGGCCCCGGAGGACCCGAGGCGGGGTCCAAGGCTGAG  1806

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