Nucleotide Global Alignment
Description
- Query:
- TRCN0000470281
- Subject:
- XM_017317728.1
- Aligned Length:
- 2971
- Identities:
- 840
- Gaps:
- 2024
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCTCATTGCGCAAAAGAGTGAAAATACAGGCCGAGAATGCAGAACCCAAAGATGAATGCTCTTTCTTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGTTGTCATCTGGCTCTGAAGAAGATAACAAGGAAGACAGCATTTGGGAACCTCAGAAGAAAGTTCCCAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGTAGACAGCCTGCTTCCAAGGGATCCAAACGGAAGCAGGGGCCCAGGGCGAAGAAGAGCTCCCAACAGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATGACGAATCAAAAGATGTGGCTGTTAAGGAGGAGTTGAACAGCCCGGTGGCTATTGTTGATGCAGATTTGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGAAAAGCCACAAGTTGCAGACGACAAAGACTCTTAAAACTGCAGCAAAAAAGCAAAAAAAACCAGTTCCGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGCCAAAAAAAGGTTGAAAGTTGATGAGGAAACCAGCCAGGCCAGCCCCTTGGAGGGTGGAGGCAGTAATGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGACCCCCTCAACAAGCGCCTGTGGAAATGTGTGCAAGAAGGAGGAGAGCGAGGACAGCTTCACGTTTGGGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCCCCGGTAAAGAGGATCAGGACTGAGTCATGTCCTCAGGGGAGGCCGGCCAGGGTTCCCGACGGTGTCAGCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACATTAAAGAGGAGGTAGAAATGAACTGGGACGTAGTACAGGTTTTATCTGAGAGAACTAATATTGAACCTTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTTGTGCCAACATCATACGCCTCTTTAATGATGACAACACAATCCCCTTCATTGTACGCTATCGAAAAGAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTAATAACCTTGATGCTGATTTCTTAAGAGAAGTTCGTCAAACCCTAGATGAGCTACGGGATGTTGCCAAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGTTCATAGTAGAATCCAGAAAATTAAGAAGGAGGGGAAAATGTCGGAGTGCTTGCTGCAAGCCTTGTTGAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTAAAACGTTCGAGGAACTAGAGCATGTGTCTGCTCCATATAAAATGGGGAGCAAGGGCACGAAAGCCCAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCAAAACAGTTGGGGCTAGAAGGAGCAGCGTGGACCCTGCTGGAGAACCCGGGGCAGCTCAACCTGCTGTCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACATCAAGCCTGATGTTAAAGGCCTTTCTGAGCTCAACGATATCGAAACAGGAGTACAACATATTTTAGCAGAC 1110
Query 1 ATGATTGCTAAAGACAAAGACACGCTTGACTTCATTCGGAACTTGTGCCAGAAGAGACATGTTTGTATCCAGTC 74
||||||||||||||||||||.|||||||||||.||||||..||||||..|..|.|||.|..|||||||||||||
Sbjct 1111 ATGATTGCTAAAGACAAAGATACGCTTGACTTTATTCGGGGCTTGTGTAAACATAGATACATTTGTATCCAGTC 1184
Query 75 ATCTCTGGCAAAAGTATCCTCAAAAAAGGTAAATGAGAAAGATGTTGATAAGTTTCTGCTCTACCAGCATTTTT 148
||||||.||||||||||||||||||||.|||||||||||.||.|||||||||||||.|||.||||||.||||.|
Sbjct 1185 ATCTCTTGCAAAAGTATCCTCAAAAAAAGTAAATGAGAAGGAAGTTGATAAGTTTCAGCTTTACCAGAATTTCT 1258
Query 149 CCTGCAACATAAGAAACATTCACCATCATCAGATTCTGGCAATTAACCGTGGAGAAAATTTGAAGGTACTGACG 222
|||||||||||||.|.|||.||||||||.|||||||||||.||||||||.|||||.|||||||||.|.|||||.
Sbjct 1259 CCTGCAACATAAGGACCATCCACCATCACCAGATTCTGGCCATTAACCGAGGAGAGAATTTGAAGATCCTGACC 1332
Query 223 GTTAAGGTCAATATTTCTGATGGAGTGAAGGATGAATTCTGTAGGTGGTGCATCCAAAACAGGTGGAGACCACG 296
||.||.|||||.||||||||||||||.|||.|.|||||||||.|.|||||.||.||.|||||||||||.|||||
Sbjct 1333 GTCAAAGTCAACATTTCTGATGGAGTAAAGAACGAATTCTGTCGATGGTGTATACAGAACAGGTGGAGGCCACG 1406
Query 297 TAGCTTTGCAAGGCCAGAGTTAATGAAGATCTTATATAATTCACTGAATGATTCCTTTAAACGCCTTATTTATC 370
|.||||||||.||||||||||.||||||||||||.|||||||||||.||||.||||||||.|||||.|||..||
Sbjct 1407 TGGCTTTGCACGGCCAGAGTTGATGAAGATCTTACATAATTCACTGGATGACTCCTTTAAGCGCCTCATTGTTC 1480
Query 371 CTCTTCTCTGTAGAGAATTCAGAGCCAAACTAACATCAGATGCAGAGAAGGAATCAGTAATGATGTTTGGACGG 444
||||.|||||||||||.||||||||||||||.||||||||||||||||||.|||||||||||||||||||||.|
Sbjct 1481 CTCTCCTCTGTAGAGAGTTCAGAGCCAAACTGACATCAGATGCAGAGAAGCAATCAGTAATGATGTTTGGACAG 1554
Query 445 AACCTTCGTCAGCTCCTTTTAACAAGCCCTGTTCCAGGGCGCACCTTAATGGGAGTGGATCCTGGTTATAAACA 518
|||||.||.|||||||||||||||||.|||||.|||||.||||||.|.||||||||.||||||||.||.|||||
Sbjct 1555 AACCTCCGCCAGCTCCTTTTAACAAGTCCTGTGCCAGGCCGCACCCTGATGGGAGTAGATCCTGGCTACAAACA 1628
Query 519 TGGTTGCAAATTAGCTATAATTTCTCCTACTAGTCAGATACTTCATACTGATGTGGTTTACTTGCATTGTGGAC 592
|||.||||||.||||.||.||||||||||||||||||||.|||||.||.|||||||||||||||||.|||||||
Sbjct 1629 TGGATGCAAACTAGCCATCATTTCTCCTACTAGTCAGATCCTTCACACGGATGTGGTTTACTTGCACTGTGGAC 1702
Query 593 AAGGCTTCCGAGAGGCGGAGAAAATAAAGACACTTTTGCTGAATTTCAACTGCAGCACAGTAGTGATTGGAAAT 666
||||||||||||||||.|||||.||.||||..|||||||||.|||||||||||||.|||||.|||||.||||||
Sbjct 1703 AAGGCTTCCGAGAGGCCGAGAAGATCAAGAGGCTTTTGCTGCATTTCAACTGCAGAACAGTGGTGATCGGAAAT 1776
Query 667 GGAACTGCCTGCAGGGAAACAGAAGCTTACTTTGCTGACCTGATAATGAAGAATTATTTTGCACCACTGGATGT 740
||||||||||||.|||||||.|||||.|||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 1777 GGAACTGCCTGCCGGGAAACTGAAGCCTACTTTGCTGACCTGATAATGAAAAATTACTTTGCACCACTGGATGT 1850
Query 741 TGTTTACTGTATCGTCAGTGAAGCAGGAGCATCAATCTACAGTGTCAGCCCTGAAGCTAACAAAGAGATGCCAG 814
.||||||||.|||||||||||||||||.||.||.|||||||||||||||||.|||||.|||||.||||||||||
Sbjct 1851 CGTTTACTGCATCGTCAGTGAAGCAGGGGCCTCCATCTACAGTGTCAGCCCCGAAGCGAACAAGGAGATGCCAG 1924
Query 815 GGCTGGACCCTAATTTGAGAAGTGCAGTTTCCATAGCAAGGCGTGTACAAGATCCATTAGCTGAGCTAGTGAAA 888
|.|||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1925 GACTGGACCCTAACTTGAGAAGTGCAGTTTCCATAGCAAGGCGTGTTCAAGATCCATTAGCTGAGCTAGTGAAA 1998
Query 889 ATTGAGCCAAAGCACATTGGAGTTGGAATGTATCAGCATGACGTATCCCAGACTTTACTCAAGGCAACACTGGA 962
.||||.||.|||||||||||||||||||||||||| ||.|.|||| |.||
Sbjct 1999 TTTGACCCGAAGCACATTGGAGTTGGAATGTATCA-------GTGTTCCAG----TTCT--------------- 2046
Query 963 CAGTGT-TGTAGAAGAATGTGTCAGCTTTGTGGGAGTGGATATTAACATCTGTTCAGAAGTTTTGTTAAGGCAT 1035
||| || ||||.|
Sbjct 2047 ---TGTCTG-AGAAAA---------------------------------------------------------- 2058
Query 1036 ATTGCAGGACTCAATGCCAACAGGGCCAAAAATATTATTGAATGGCGAGAGAAAAATGGACCCTTTATCAACCG 1109
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1110 AGAACAGCTGAAGAAAGTGAAAGGGCTGGGCCCAAAATCCTTCCAACAGTGTGCTGGCTTCATCAGAATCAACC 1183
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1184 AGGATTATATCCGAACGTTTTGCAGTCAGCAAACTGAAACTTCAGGCCAAATTCAAGGAGTTGCTGTGACATCT 1257
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1258 TCAGCAGACGTTGAGGTCACAAATGAGAAGCAGGGCAAAAAGAAGAGCAAAACTGCAGTGAATGTTTTACTGAA 1331
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1332 GCCAAATCCTTTGGACCAAACTTGTATTCATCCAGAATCATATGACATAGCAATGAGGTTTTTGTCATCCATTG 1405
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1406 GAGGGACACTGTATGAGGTTGGAAAGCCTGAAATGCAACAAAAAATAAATTCATTCCTTGAAAAGGAAGGAATG 1479
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1480 GAGAAAATTGCAGAAAGATTGCAAACAACAGTACACACCTTACAGGTCATCATAGATGGTCTCAGCCAGCCTGA 1553
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1554 AAGCTTTGACTTTCGAACAGATTTTGATAAACCTGATTTCAAGAGAAGCATAGTATGCCTGGAAGATCTGCAGA 1627
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1628 TTGGGACAGTTCTTACAGGCAAAGTTGAGAATGCCACTCTCTTTGGAATTTTTGTGGATATAGGAGTGGGGAAA 1701
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1702 TCTGGGCTGATTCCCATACGAAATGTAACAGAAGCAAAACTTTCAAAAACAAAGAAGAGAAGAAGCCTTGGACT 1775
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1776 GGGCCCCGGAGAAAGAGTGGAAGTCCAAGTACTCAACATTGACATCCCCCGATCTAGGATTACTCTGGACCTCA 1849
Sbjct 2059 -------------------------------------------------------------------------- 2058
Query 1850 TTCGGGTGTTA 1860
Sbjct 2059 ----------- 2058
