Nucleotide Global Alignment

Description

• Query: TRCN0000470293
• Subject: XM_011244033.1
• Aligned Length: 1294
• Identities: 932
• Gaps: 218

Alignment

Query    1  ATGGGTAGCAAGAAACTAAAACGAGTGGGTTTATCACAAGAGCTGTGTGACCGTCTGAGTAGACATCAGATCCT  74
            |||.|.|||||||||||||.|||||||||||||||.|.||||||||||||||||.|.||.|||.|.|||||..|
Sbjct    1  ATGAGCAGCAAGAAACTAAGACGAGTGGGTTTATCTCCAGAGCTGTGTGACCGTTTAAGCAGATACCAGATTGT  74

Query   75  TACCTGTCAGGACTTTTTATGTCTTTCCCCACTGGAGCTTATGAAGGTGACTGGTCTGAGTTATCGAGGTGTCC  148
            ||.|||||||.||||||||.||||.||||||||.||.||||||||.||||||||.||||||||..|||||||||
Sbjct   75  TAACTGTCAGCACTTTTTAAGTCTCTCCCCACTAGAACTTATGAAAGTGACTGGCCTGAGTTACAGAGGTGTCC  148

Query  149  ATGAACTTCTATGTATGGTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATAAAAGCACAAAGG  222
            |.||.|||||...||..||.||||.||||||||||||..||||||||||||||||||.|.||||..|||.||||
Sbjct  149  ACGAGCTTCTTCATACAGTAAGCAAGGCCTGTGCCCCGCAGATGCAAACGGCTTATGAGTTAAAGACACGAAGG  222

Query  223  TCTGCTGATTTCTCACCAGCATTCTTATCTACTACCCTTTCTGCTTTGGACGAAGCCCTGCATGGTGGTGTGGC  296
            |||||..||.|||||||.||||||.|.|||||||||||.|..||.|||||.|||||..||||.|||||||||.|
Sbjct  223  TCTGCACATCTCTCACCGGCATTCCTGTCTACTACCCTGTGCGCCTTGGATGAAGCATTGCACGGTGGTGTGCC  296

Query  297  TTGTGGATCCCTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATGAGCATTT  370
            |||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||..|.|
Sbjct  297  TTGTGGATCTCTCACAGAGATTACAGGTCCACCAGGTTGCGGAAAAACTCAGTTTTGCATAATGATGAGTGTCT  370

Query  371  TGGCTACATTACCCACCAACATGGGAGGATTAGAAGGAGCTGTGGTGTACATTGACACAGAGTCTGCATTTAGT  444
            |.|||||||||||.||||.|.||||||||||||||||.||||||||.|||||.|||||||||||||||||||.|
Sbjct  371  TAGCTACATTACCTACCAGCCTGGGAGGATTAGAAGGGGCTGTGGTCTACATCGACACAGAGTCTGCATTTACT  444

Query  445  GCTGAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCC-CAGATATTTTAACACTGAAGAAAAGTTACTTTTGA  517
            |||||.|||||||||||.||.||.|||||.|||||||| || |||||||||||||||.|||||.||.|||.|||
Sbjct  445  GCTGAGAGACTGGTTGAGATTGCGGAATCTCGTTTTCCACA-ATATTTTAACACTGAGGAAAAATTGCTTCTGA  517

Query  518  CAAGTAGTAAAGTTCATCTTTATCGGGAACTCACCTGTGATGAAGTTCTACAAAGGATTGAATCTTTGGAAGAA  591
            |.||.||||.|||||||||||..||.||.|||||||||||.|...|||||||||||.||||.||||||||.|||
Sbjct  518  CCAGCAGTAGAGTTCATCTTTGCCGAGAGCTCACCTGTGAGGGGCTTCTACAAAGGCTTGAGTCTTTGGAGGAA  591

Query  592  GAAATTATCTCAAAAGGAATTAAACTTGTGATTCTTGACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATGC  665
            ||.||.||.||.||||||.||||.|||||||||.|||||||..||||||||||||||||||||||||||||..|
Sbjct  592  GAGATCATTTCGAAAGGAGTTAAGCTTGTGATTGTTGACTCCATTGCTTCTGTGGTCAGAAAGGAGTTTGACCC  665

Query  666  ACAACTTCAAGGCAATCTCAAAGAAAGAAACAAGTTCTT-GGCAAGAGAGGCATCCTCCTTGAAGTATTTGGCT  738
            ..|.|||||||||||..||||||||||.||||||||||| ||||| ||..||.||||...|||||||..||||.
Sbjct  666  GAAGCTTCAAGGCAACATCAAAGAAAGGAACAAGTTCTTGGGCAA-AGGAGCGTCCTTACTGAAGTACCTGGCA  738

Query  739  GAGGAGTTTTCAATCCCA---------------------------------------------GTTATCTTGAC  767
            |.||||||||||||||||                                             |||||||||||
Sbjct  739  GGGGAGTTTTCAATCCCAGGAGAGAGGAAGATGCCTGCCACATCTGCATCTTCAGGAGGGAAGGTTATCTTGAC  812

Query  768  GAATCAGATTACAACCCATCTGAGTGGAGCCCTGGCTTCTCAGGCAGACCTGGTGTCTCCAGCTGATGATTTGT  841
            ||||||.|||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||||
Sbjct  813  GAATCAAATTACGACCCATCTGAGTGGAGCCCTCCCTTCTCAAGCAGACCTGGTGTCTCCAGCTGATGATTTGT  886

Query  842  CCCTGTCTG-----------------------------------------------------------------  850
            |||||||||                                                                 
Sbjct  887  CCCTGTCTGAAGATGCCAGAAGGAAGGCAGCTGGGCCAGCAGAGAGGCCTGAACTCAGGCCTCAACAATGGCTG  960

Query  851  ----AAGGCACTTCTGGATCCAGCTGTGTGATAGCCGCACTAGGAAATACCTGGAGTCACAGTGTGAATACCCG  920
                |||||||||||||||||||||||.||.||||.|||||||||||.||.|||.|||||.|||||||.|||||
Sbjct  961  CAGCAAGGCACTTCTGGATCCAGCTGTTTGGTAGCTGCACTAGGAAACACATGGGGTCACTGTGTGAACACCCG  1034

Query  921  GCTGATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCT  994
            ||||||.||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||.|||||||||
Sbjct 1035  GCTGATTCTCCAGTACCTTGATTCAGAGAGAAGGCAGATTCTCATTGCCAAGTCTCCTCTGGCTGCCTTCACCT  1108

Query  995  CATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGAGACAACA-----TTTTGC-TCT------GTC  1056
            |.|||||||||||||||||||.|||||||||||||||||||||..||.||     |..||| |||      || 
Sbjct 1109  CCTTTGTCTACACCATCAAGGGGGAAGGCCTGGTTCTTCAAGATTCATCAGGTCTTCATGCATCTGGGCTGGT-  1181

Query 1057  ACCCAA---GCTGAACTGA-----------ACTGGGCTCCAGAAATCCTCCCACCTCAGCCTCCTGAGCAGCTA  1116
               |||   |||||.||.|           ||||||            ||||                      
Sbjct 1182  ---CAAGGTGCTGAGCTCATCTTCTGTATTACTGGG------------TCCC----------------------  1218

Query 1117  GGACTACAGATGTGCCACCATACCCAGCTAATTTTT  1152
                                                
Sbjct 1219  ------------------------------------  1218