Nucleotide Global Alignment
Description
- Query:
- TRCN0000470293
- Subject:
- XM_017315002.1
- Aligned Length:
- 1302
- Identities:
- 923
- Gaps:
- 237
Alignment
Query 1 ---------------------------------ATGGGTAGCAAGAAACTAAAACGAGTGGGTTTATCACAAGA 41
|||.|.|||||||||||||.|||||||||||||||.|.|||
Sbjct 1 ATGCTTGTAAGATTCTTTGGGAGCCCTGGAAACATGAGCAGCAAGAAACTAAGACGAGTGGGTTTATCTCCAGA 74
Query 42 GCTGTGTGACCGTCTGAGTAGACATCAGATCCTTACCTGTCAGGACTTTTTATGTCTTTCCCCACTGGAGCTTA 115
|||||||||||||.|.||.|||.|.|||||..|||.|||||||.||||||||.||||.||||||||.||.||||
Sbjct 75 GCTGTGTGACCGTTTAAGCAGATACCAGATTGTTAACTGTCAGCACTTTTTAAGTCTCTCCCCACTAGAACTTA 148
Query 116 TGAAGGTGACTGGTCTGAGTTATCGAGGTGTCCATGAACTTCTATGTATGGTCAGCAGGGCCTGTGCCCCAAAG 189
||||.||||||||.||||||||..||||||||||.||.|||||...||..||.||||.||||||||||||..||
Sbjct 149 TGAAAGTGACTGGCCTGAGTTACAGAGGTGTCCACGAGCTTCTTCATACAGTAAGCAAGGCCTGTGCCCCGCAG 222
Query 190 ATGCAAACGGCTTATGGGATAAAAGCACAAAGGTCTGCTGATTTCTCACCAGCATTCTTATCTACTACCCTTTC 263
||||||||||||||||.|.||||..|||.|||||||||..||.|||||||.||||||.|.|||||||||||.|.
Sbjct 223 ATGCAAACGGCTTATGAGTTAAAGACACGAAGGTCTGCACATCTCTCACCGGCATTCCTGTCTACTACCCTGTG 296
Query 264 TGCTTTGGACGAAGCCCTGCATGGTGGTGTGGCTTGTGGATCCCTCACAGAGATTACAGGTCCACCAGGTTGTG 337
.||.|||||.|||||..||||.|||||||||.||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 297 CGCCTTGGATGAAGCATTGCACGGTGGTGTGCCTTGTGGATCTCTCACAGAGATTACAGGTCCACCAGGTTGCG 370
Query 338 GAAAAACTCAGTTTTGTATAATGATGAGCATTTTGGCTACATTACCCACCAACATGGGAGGATTAGAAGGAGCT 411
||||||||||||||||.|||||||||||..|.||.|||||||||||.||||.|.||||||||||||||||.|||
Sbjct 371 GAAAAACTCAGTTTTGCATAATGATGAGTGTCTTAGCTACATTACCTACCAGCCTGGGAGGATTAGAAGGGGCT 444
Query 412 GTGGTGTACATTGACACAGAGTCTGCATTTAGTGCTGAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCC-CA 484
|||||.|||||.|||||||||||||||||||.||||||.|||||||||||.||.||.|||||.|||||||| ||
Sbjct 445 GTGGTCTACATCGACACAGAGTCTGCATTTACTGCTGAGAGACTGGTTGAGATTGCGGAATCTCGTTTTCCACA 518
Query 485 GATATTTTAACACTGAAGAAAAGTTACTTTTGACAAGTAGTAAAGTTCATCTTTATCGGGAACTCACCTGTGAT 558
|||||||||||||||.|||||.||.|||.||||.||.||||.|||||||||||..||.||.|||||||||||.
Sbjct 519 -ATATTTTAACACTGAGGAAAAATTGCTTCTGACCAGCAGTAGAGTTCATCTTTGCCGAGAGCTCACCTGTGAG 591
Query 559 GAAGTTCTACAAAGGATTGAATCTTTGGAAGAAGAAATTATCTCAAAAGGAATTAAACTTGTGATTCTTGACTC 632
|...|||||||||||.||||.||||||||.|||||.||.||.||.||||||.||||.|||||||||.|||||||
Sbjct 592 GGGCTTCTACAAAGGCTTGAGTCTTTGGAGGAAGAGATCATTTCGAAAGGAGTTAAGCTTGTGATTGTTGACTC 665
Query 633 TGTTGCTTCTGTGGTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAAAGAAACAAGTTCTT-G 705
..||||||||||||||||||||||||||||..|..|.|||||||||||..||||||||||.||||||||||| |
Sbjct 666 CATTGCTTCTGTGGTCAGAAAGGAGTTTGACCCGAAGCTTCAAGGCAACATCAAAGAAAGGAACAAGTTCTTGG 739
Query 706 GCAAGAGAGGCATCCTCCTTGAAGTATTTGGCTGAGGAGTTTTCAATCCCA----------------------- 756
|||| ||..||.||||...|||||||..||||.|.||||||||||||||||
Sbjct 740 GCAA-AGGAGCGTCCTTACTGAAGTACCTGGCAGGGGAGTTTTCAATCCCAGGAGAGAGGAAGATGCCTGCCAC 812
Query 757 ----------------------GTTATCTTGACGAATCAGATTACAACCCATCTGAGTGGAGCCCTGGCTTCTC 808
|||||||||||||||||.|||||.||||||||||||||||||||..||||||
Sbjct 813 ATCTGCATCTTCAGGAGGGAAGGTTATCTTGACGAATCAAATTACGACCCATCTGAGTGGAGCCCTCCCTTCTC 886
Query 809 AGGCAGACCTGGTGTCTCCAGCTGATGATTTGTCCCTGTCTG-------------------------------- 850
|.||||||||||||||||||||||||||||||||||||||||
Sbjct 887 AAGCAGACCTGGTGTCTCCAGCTGATGATTTGTCCCTGTCTGAAGATGCCAGAAGGAAGGCAGCTGGGCCAGCA 960
Query 851 -------------------------------------AAGGCACTTCTGGATCCAGCTGTGTGATAGCCGCACT 887
|||||||||||||||||||||||.||.||||.|||||
Sbjct 961 GAGAGGCCTGAACTCAGGCCTCAACAATGGCTGCAGCAAGGCACTTCTGGATCCAGCTGTTTGGTAGCTGCACT 1034
Query 888 AGGAAATACCTGGAGTCACAGTGTGAATACCCGGCTGATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATTC 961
||||||.||.|||.|||||.|||||||.|||||||||||.||||||||||||||||||||||||||.|||||||
Sbjct 1035 AGGAAACACATGGGGTCACTGTGTGAACACCCGGCTGATTCTCCAGTACCTTGATTCAGAGAGAAGGCAGATTC 1108
Query 962 TTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAA 1035
|.|||||||||||.|||||||||.||||||||||.|||||||||||||||||||.|||||||||||||||||||
Sbjct 1109 TCATTGCCAAGTCTCCTCTGGCTGCCTTCACCTCCTTTGTCTACACCATCAAGGGGGAAGGCCTGGTTCTTCAA 1182
Query 1036 GAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGG-GCTCCAGAAATCCTCCCACCTCAGCCTCCTG 1108
||||| |.||| || ||..||||| || || |||.|.|
Sbjct 1183 GAGAC--------------TGACC--AG-TGTCCTGAA--GGAGC---------CCTTCAA------------- 1215
Query 1109 AGCAGCTAGGACTACAGATGTGCCACCATACCCAGCTAATTTTT 1152
Sbjct 1216 -------------------------------------------- 1215