Nucleotide Global Alignment

Description

• Query: TRCN0000470306
• Subject: NM_001326308.2
• Aligned Length: 1388
• Identities: 803
• Gaps: 508

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCAACAGTGAAACCTTTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGA  74

Query    1  -------------------------------------------------------------ATGAGA-------  6
                                                                         .|||.|       
Sbjct   75  TCTCATTGACGAAGACCTCAACTTTGTGCAGGAGAATCCCTTATCTCAGAAAAAACCTACAGTGACACTTACAT  148

Query    7  ATG--TCTTC--------------AAAGTTTCCATC-ACCACCT----CTACCAAT-----------TTTTC--  46
            |||  |||||              |||.||   ||| |||||||    .||..|||           |.|||  
Sbjct  149  ATGGTTCTTCTCGCCCTTCTATTGAAATTT---ATCGACCACCTGCAAGTAGAAATGCAGATAGTGGTGTTCAT  219

Query   47  ----------------TTCCACCGGAGC-----------------------------------CAGTGGACTTA  69
                            |||.||.|.|||                                   |||.|.|.||.
Sbjct  220  TTAAACAGGTTGCAATTTCAACAGCAGCAGAATAGTATTCATGCTGCCAAGCAGCTTGATATGCAGAGTAGTTG  293

Query   70  GGTTCCAT----AACA-------------------AGCTCCT------CTT------------------GTTC-  95
            |||   ||    ||||                   ||.|.||      |||                  |||| 
Sbjct  294  GGT---ATATGAAACAGGACGTTTGTGTGAACCAGAGGTGCTTAACAGCTTAGAAGAAACGTATAGTCCGTTCT  364

Query   96  ---------ACT------GAATGAG---------------CT------AGACAATATTTCC-----------CA  122
                     |||      .||||||               ||      |||.||..||.||           ||
Sbjct  365  TTAGAAACAACTCGGAGAAAATGAGTATGGAGGATGAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTAAGTTCA  438

Query  123  CCTTTTAAGG----AAAAT---ATCAGCTGAT----------ATCAATGAA-------ATTAAAGG------AA  166
            ..|.||||.|    |||||   ||||  ||||          |..|| |||       ||||..||      |.
Sbjct  439  GTTGTTAAAGTAAAAAAATTCAATCA--TGATGGAGAAGAGGAGGAA-GAAGATGATGATTACGGGTCTCGAAC  509

Query  167  TGAAAGCAGCT-----ATTTTGACAGTGGAAGCAAA----------------TCTTTTTGA---TCTAAATGTT  216
            .|.|||||.||     |.|.||.|.|||...|||||                |||.||..|   ||||||    
Sbjct  510  AGGAAGCATCTCCAGCAGTGTGTCTGTGCCTGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCTTCTAAA----  579

Query  217  AGAGTGTCCAAG--AATGAAGCAAAAATTTCATCTTTGGAGGTTA-AAATGAA--TGAATATT------CAACA  279
                    ||||  ||     |||.|||.|.|| ||||.|||.|| |..||||  |.||.|.|      |||.|
Sbjct  580  --------CAAGCTAA-----CAAGAATCTGAT-TTTGAAGGCTATATCTGAAGCTCAAGAATCCGTAACAAAA  639

Query  280  ACATATGAAT----------------GCAACAGACAGTTTGA---------AGA-----------TCAAGAAGA  317
            |||..|.|.|                |.||||||||.||..|         |||           |||||||||
Sbjct  640  ACAACTAACTACTCTACAGTTCCACAGAAACAGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTCAAGAAGA  713

Query  318  A--GATA--------------------------------CTGAAT-------CACAGTCAAGAACTACTGATGT  350
            |  |.||                                |.||||       |.||.|.|||||     || |.
Sbjct  714  ATTGCTAGCAGAAGTGGTCCAGGGACAAAGTAGGACCCCCAGAATAAGTCCCCCCATTAAAGAA-----GA-GG  781

Query  351  AAAAATAATCGGCTTCCTTAGAAACGTTGAGA---AAGGAACTCAACAGAGGCAATTATTATCCCGACTGCAAA  421
            |||.|.||...|.|||..||||||     |.|   |||||||||||||||||||||||||||||||||||||||
Sbjct  782  AAACAAAAGGAGATTCTGTAGAAA-----AAAATCAAGGAACTCAACAGAGGCAATTATTATCCCGACTGCAAA  850

Query  422  TCGACCCAGTAATGGCAGAAACTCTGCAGATGAGTCAAGCTGAGATGAGTGAACTGAGTGTGGCACAGAAACCA  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  851  TCGACCCAGTAATGGCAGAAACTCTGCAGATGAGTCAAGCTGAGATGAGTGAACTGAGTGTGGCACAGAAACCA  924

Query  496  GAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGGGATGAGTGTGCCTACCATCACCCCAT  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  925  GAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGGGATGAGTGTGCCTACCATCACCCCAT  998

Query  570  CTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTTTGTTCACCCAAATTGTAAATATG  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  999  CTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTTTGTTCACCCAAATTGTAAATATG  1072

Query  644  ATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTAGAAGAATTCCAGTACTGTCTCCAAAAC--  715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct 1073  ATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTAGAAGAATTCCAGTACTGTCTCCAAAACCA  1146

Query  716  -CAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAAGATGGAATG  788
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147  GCAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAAGATGGAATG  1220

Query  789  TCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTACAAGACCGGACTGCACATTCTACCATCCCA  862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221  TCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTACAAGACCGGACTGCACATTCTACCATCCCA  1294

Query  863  CCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGCGAA  918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295  CCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGCGAA  1350