Nucleotide Global Alignment
Description
- Query:
- TRCN0000470306
- Subject:
- NM_001326310.2
- Aligned Length:
- 2231
- Identities:
- 803
- Gaps:
- 1351
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGATCGGCACCGAGATCAGCCGCAAGATCCGGAGTGCCATTAAGGGGAAATTACAAGAATTAGGAGCTTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTTGATGAAGAACTTCCTGATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCTGTCCCTGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTTCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTGTTACAACTGAACCCTCTAGTCTGAAGTCTTCTGATACCAACATCTTTGATAGTAACGTGCCTTCAAACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCAATTTCAGTCGGGGAGATGAGAGGAGGCATGAAGCTGCAGTGCCACCACTTGCCATTCCTAGCGCGAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGAAAAAAGAGATTCCAGAGTTTCTACAAGTTCGCAGGAGTCAAAAACCACAAATGTCAGACAGACTTACGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGGAGCTGCAACCCGACTAATGTCAACAGTGAAACCTTTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TATTAAGCCAGAACCAGATGATCTCATTGACGAAGACCTCAACTTTGTGCAGGAGAATCCCTTATCTCAGAAAA 592
Query 1 --------ATGAGA-------ATG--TCTTC--------------AAAGTTTCCATC-ACCACCT----CTACC 38
.|||.| ||| ||||| |||.|| ||| ||||||| .||..
Sbjct 593 AACCTACAGTGACACTTACATATGGTTCTTCTCGCCCTTCTATTGAAATTT---ATCGACCACCTGCAAGTAGA 663
Query 39 AAT-----------TTTTC------------------TTCCACCGGAGC------------------------- 58
||| |.||| |||.||.|.|||
Sbjct 664 AATGCAGATAGTGGTGTTCATTTAAACAGGTTGCAATTTCAACAGCAGCAGAATAGTATTCATGCTGCCAAGCA 737
Query 59 ----------CAGTGGACTTAGGTTCCAT----AACA-------------------AGCTCCT------CTT-- 91
|||.|.|.||.||| || |||| ||.|.|| |||
Sbjct 738 GCTTGATATGCAGAGTAGTTGGGT---ATATGAAACAGGACGTTTGTGTGAACCAGAGGTGCTTAACAGCTTAG 808
Query 92 ----------------GTTC----------ACT------GAATGAG---------------CT------AGACA 112
|||| ||| .|||||| || |||.|
Sbjct 809 AAGAAACGTATAGTCCGTTCTTTAGAAACAACTCGGAGAAAATGAGTATGGAGGATGAAAACTTTCGGAAGAGA 882
Query 113 ATATTTCC-----------CACCTTTTAAGG----AAAAT---ATCAGCTGAT----------ATCAATGAA-- 156
|..||.|| ||..|.||||.| ||||| |||| |||| |..|| |||
Sbjct 883 AAGTTGCCTGTGGTAAGTTCAGTTGTTAAAGTAAAAAAATTCAATCA--TGATGGAGAAGAGGAGGAA-GAAGA 953
Query 157 -----ATTAAAGG------AATGAAAGCAGCT-----ATTTTGACAGTGGAAGCAAA----------------T 198
||||..|| |..|.|||||.|| |.|.||.|.|||...||||| |
Sbjct 954 TGATGATTACGGGTCTCGAACAGGAAGCATCTCCAGCAGTGTGTCTGTGCCTGCAAAGCCTGAAAGGAGACCTT 1027
Query 199 CTTTTTGA---TCTAAATGTTAGAGTGTCCAAG--AATGAAGCAAAAATTTCATCTTTGGAGGTTA-AAATGAA 266
||.||..| |||||| |||| || |||.|||.|.|| ||||.|||.|| |..||||
Sbjct 1028 CTCTTCCACCTTCTAAA------------CAAGCTAA-----CAAGAATCTGAT-TTTGAAGGCTATATCTGAA 1083
Query 267 --TGAATATT------CAACAACATATGAAT----------------GCAACAGACAGTTTGA---------AG 307
|.||.|.| |||.||||..|.|.| |.||||||||.||..| ||
Sbjct 1084 GCTCAAGAATCCGTAACAAAAACAACTAACTACTCTACAGTTCCACAGAAACAGACACTTCCAGTTGCTCCCAG 1157
Query 308 A-----------TCAAGAAGAA--GATA--------------------------------CTGAAT-------C 329
| |||||||||| |.|| |.|||| |
Sbjct 1158 AACTCGAACTTCTCAAGAAGAATTGCTAGCAGAAGTGGTCCAGGGACAAAGTAGGACCCCCAGAATAAGTCCCC 1231
Query 330 ACAGTCAAGAACTACTGATGTAAAAATAATCGGCTTCCTTAGAAACGTTGAGA---AAGGAACTCAACAGAGGC 400
.||.|.||||| || |.|||.|.||...|.|||..|||||| |.| ||||||||||||||||||
Sbjct 1232 CCATTAAAGAA-----GA-GGAAACAAAAGGAGATTCTGTAGAAA-----AAAATCAAGGAACTCAACAGAGGC 1294
Query 401 AATTATTATCCCGACTGCAAATCGACCCAGTAATGGCAGAAACTCTGCAGATGAGTCAA--------------- 459
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295 AATTATTATCCCGACTGCAAATCGACCCAGTAATGGCAGAAACTCTGCAGATGAGTCAAGATTACTATGACATG 1368
Query 460 -------------------------------------------------------------------------- 459
Sbjct 1369 GAATCCATGGTCCATGCAGACACAAGATCATTTATTCTGAAGAAGCCAAAGCTGTCTGAGGAAGTAGTAGTGGC 1442
Query 460 -------------------------------------------------------------------------- 459
Sbjct 1443 ACCAAACCAAGAGTCGGGGATGAAGACTGCAGATTCCCTTCGGGTACTTTCAGGACACCTTATGCAGACACGAG 1516
Query 460 -------------------------------------------------------------------------- 459
Sbjct 1517 ATCTTGTACAACCAGATAAACCTGCAAGTCCCAAGTTTATAGTGACGCTGGATGGTGTCCCCAGCCCCCCAGGA 1590
Query 460 -------------------------------------------------------------------------- 459
Sbjct 1591 TACATGTCAGATCAAGAGGAGGACATGTGCTTTGAAGGAATGAAACCCGTAAACCAAACTGCAGCCTCAAACAA 1664
Query 460 -------------------------------------------------------------------GCTGAGA 466
|||||||
Sbjct 1665 GGGACTCAGAGGTCTCCTCCACCCACAGCAGTTGCACTTGCTGAGCAGGCAGCTTGAGGACCCAAATGCTGAGA 1738
Query 467 TGAGTGAACTGAGTGTGGCACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 TGAGTGAACTGAGTGTGGCACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAAT 1812
Query 541 GGGGATGAGTGTGCCTACCATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATG 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1813 GGGGATGAGTGTGCCTACCATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATG 1886
Query 615 TTTGTTTGTTCACCCAAATTGTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTA 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1887 TTTGTTTGTTCACCCAAATTGTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTA 1960
Query 689 GAAGAATTCCAGTACTGTCTCCAAAAC---CAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGT 759
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1961 GAAGAATTCCAGTACTGTCTCCAAAACCAGCAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGT 2034
Query 760 TACTTCCCTGCTTGTAAGAAGATGGAATGTCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTAC 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 TACTTCCCTGCTTGTAAGAAGATGGAATGTCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTAC 2108
Query 834 AAGACCGGACTGCACATTCTACCATCCCACCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTC 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2109 AAGACCGGACTGCACATTCTACCATCCCACCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTC 2182
Query 908 AAACCAGCGAA 918
|||||||||||
Sbjct 2183 AAACCAGCGAA 2193
