Nucleotide Global Alignment

Description

• Query: TRCN0000470306
• Subject: NM_001326311.2
• Aligned Length: 1334
• Identities: 776
• Gaps: 478

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCAACAGTGAAACCTTTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGA  74

Query    1  -----------------------------ATGAGAATGTCTT---------------CAAAGT-----TTCCA-  24
                                         |.||||||..|||               .|.|||     ||.|| 
Sbjct   75  TCTCATTGACGAAGACCTCAACTTTGTGCAGGAGAATCCCTTATCTCAGAAAAAACCTACAGTGACACTTACAT  148

Query   25  ----------TCACCACCTCTA--CCAATTTTTCTTCCACC-------------GGAGCCAGTGGACTTAGGTT  73
                      ||.|| |.||||  ..|||||.||..|||||             |.||..|||||..||     
Sbjct  149  ATGGTTCTTCTCGCC-CTTCTATTGAAATTTATCGACCACCTGCAAGTAGAAATGCAGATAGTGGTGTT-----  216

Query   74  CCAT---AACAAGCTCCTCTTG----TTCA-------CTGAATGAGCTAGACAATATT-----TCCCACCTTTT  128
             |||   ||||.|      |||    ||||       |.||||         |.||||     |.|||      
Sbjct  217  -CATTTAAACAGG------TTGCAATTTCAACAGCAGCAGAAT---------AGTATTCATGCTGCCA------  268

Query  129  AAGGAAAATATCAGC-TGATAT-CA--------------ATGAAATTAAAGGA-------ATGAA----AGCAG  175
                     |.|||| |||||| ||              |||||   |.||||       .||||    ||..|
Sbjct  269  ---------AGCAGCTTGATATGCAGAGTAGTTGGGTATATGAA---ACAGGACGTTTGTGTGAACCAGAGGTG  330

Query  176  CTATTTTGACAG--TGGAAGCAAA------------TCTTTTTGA------TC----TAAATG---TTAGAG--  220
            |    ||.||||  |.|||| |||            || |||.||      ||    .|||||   .|.|||  
Sbjct  331  C----TTAACAGCTTAGAAG-AAACGTATAGTCCGTTC-TTTAGAAACAACTCGGAGAAAATGAGTATGGAGGA  398

Query  221  TGTCCAAGAAT----GAAGCAAAAATTTCATCTTTGG--AG-------GTTAAAATGAATGAATATTCAA-CAA  280
            ||   ||.|.|    ||||..|||.||.|  ||.|||  ||       ||||||.|.||  ||.|||||| ||.
Sbjct  399  TG---AAAACTTTCGGAAGAGAAAGTTGC--CTGTGGTAAGTTCAGTTGTTAAAGTAAA--AAAATTCAATCAT  465

Query  281  CAT----------------------ATGAATGC--------AACAG------------ACAGTTTG--------  304
            .||                      ||||.|.|        |||||            .||||.||        
Sbjct  466  GATGGAGAAGAGGAGGAAGAAGATGATGATTACGGGTCTCGAACAGGAAGCATCTCCAGCAGTGTGTCTGTGCC  539

Query  305  ----AAG---------------------------------------ATCAAGAA---------GAAG---ATA-  322
                |||                                       |.||||||         ||||   ||| 
Sbjct  540  TGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCTAACAAGAATCTGATTTTGAAGGCTATAT  613

Query  323  CTGAATCACA-------GT--CAAGAACTACTGATGTAAAAATAATCGGC--TTCCTTAGAAAC----------  375
            |||||.|.||       ||  |||.|||.|||       ||.||.||..|  ||||..||||||          
Sbjct  614  CTGAAGCTCAAGAATCCGTAACAAAAACAACT-------AACTACTCTACAGTTCCACAGAAACAGACACTTCC  680

Query  376  -GTTG-----AGAA-AGGAA---CTCAA-------------CAGAGG------------CAATTATTATCCC--  412
             ||||     |||| ..|||   |||||             ||||.|            .||.||..|.|||  
Sbjct  681  AGTTGCTCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGCAGAAGTGGTCCAGGGACAAAGTAGGACCCCCA  754

Query  413  GACTGCAAATCGACCCAGTAATG--GCAGAAAC----------TCTGCAG--ATGAGTCAAGCTGAGATGAGTG  472
            ||.|  ||.||..||||.|||.|  |..|||||          ||||.||  |..|.|||||||||||||||||
Sbjct  755  GAAT--AAGTCCCCCCATTAAAGAAGAGGAAACAAAAGGAGATTCTGTAGAAAAAAATCAAGCTGAGATGAGTG  826

Query  473  AACTGAGTGTGGCACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGGGAT  546
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  827  AACTGAGTGTGGCACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGGGAT  900

Query  547  GAGTGTGCCTACCATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTT  620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  901  GAGTGTGCCTACCATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTT  974

Query  621  TGTTCACCCAAATTGTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTAGAAGAA  694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  975  TGTTCACCCAAATTGTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTAGAAGAA  1048

Query  695  TTCCAGTACTGTCTCCAAAACCAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGTTACTTCCCT  768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049  TTCCAGTACTGTCTCCAAAACCAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGTTACTTCCCT  1122

Query  769  GCTTGTAAGAAGATGGAATGTCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTACAAGACCGGA  842
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123  GCTTGTAAGAAGATGGAATGTCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTACAAGACCGGA  1196

Query  843  CTGCACATTCTACCATCCCACCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGCG  916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197  CTGCACATTCTACCATCCCACCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGCG  1270

Query  917  AA  918
            ||
Sbjct 1271  AA  1272