Nucleotide Global Alignment
Description
- Query:
- TRCN0000470306
- Subject:
- NM_001326313.2
- Aligned Length:
- 1619
- Identities:
- 800
- Gaps:
- 736
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGATCGGCACCGAGATCAGCCGCAAGATCCGGAGTGCCATTAAGGGGAAATTACAAGAATTAGGAGCTTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTTGATGAAGAACTTCCTGATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGG 148
Query 1 -----------------------------ATGAGA--------ATGTCTTC--------------AAAGTT--- 20
||..|| |||.|||| |||.||
Sbjct 149 ATCTGTCCCTGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTTCGC 222
Query 21 TCCATCACCA------CCTC------------------TACCA--ATTTTT-------------CTTC-CACCG 54
||..|.||.| |||| ||||| ||.||| |||| .||..
Sbjct 223 TCTGTTACAACTGAACCCTCTAGTCTGAAGTCTTCTGATACCAACATCTTTGATAGTAACGTGCCTTCAAACAA 296
Query 55 GAGC-----CAGT---GGACTT---AGGTTCCATAACAAGCT---------CCTCTTG---TTC---------- 95
|||| |||| |||..| |||...||| .||||| ||.|||| |||
Sbjct 297 GAGCAATTTCAGTCGGGGAGATGAGAGGAGGCAT--GAAGCTGCAGTGCCACCACTTGCCATTCCTAGCGCGAG 368
Query 96 -ACTGAATGAGCTAGACAATATTTCC----------CACCTTTTAAGGA------------AAATATCAG---- 142
.|||||..| |||.| |||| ||..||...|||| ||||.||||
Sbjct 369 ACCTGAAAAA---AGAGA----TTCCAGAGTTTCTACAAGTTCGCAGGAGTCAAAAACCACAAATGTCAGACAG 435
Query 143 ---------------------------CTGATATCAA---TGAAA---TTAAAGGAATGAAAGCA--------- 174
||.||.|||| ||||| ||.|.||| |..||||
Sbjct 436 ACTTACGATGATGGAGCTGCAACCCGACTAATGTCAACAGTGAAACCTTTGAGGGA--GCCAGCACCCTCTGAA 507
Query 175 ---------GCTATT----------------------TTGACAGTGGAAG----CAAATCTTTTTG-------- 205
|.|||| ||||| |||| ||| ||||.||
Sbjct 508 GATGTGATTGATATTAAGCCAGAACCAGATGATCTCATTGAC----GAAGACCTCAA--CTTTGTGCAGGAGAA 575
Query 206 ------ATCT-----AAATGTTAGAGTG-----TCCA-----------------------AGAA---------- 230
|||| |||...||.|||| |.|| .|||
Sbjct 576 TCCCTTATCTCAGAAAAAACCTACAGTGACACTTACATATGGTTCTTCTCGCCCTTCTATTGAAATTTATCGAC 649
Query 231 ----TG-AAGCAAAAAT-------------TTCATCTTTGGAGGTTAAAAT-------------GAATGAATAT 273
|| |||.|.|||| |||||.|....|||||..||| |||| |.|||
Sbjct 650 CACCTGCAAGTAGAAATGCAGATAGTGGTGTTCATTTAAACAGGTTGCAATTTCAACAGCAGCAGAAT-AGTAT 722
Query 274 TCA-----ACAA-------CATATG---------------AATGCAACA-GACAGTTTG-AAGATCAAGA---- 314
||| .||| .||||| .|||.|||| ||| ||||| ..||.|.|||
Sbjct 723 TCATGCTGCCAAGCAGCTTGATATGCAGAGTAGTTGGGTATATGAAACAGGAC-GTTTGTGTGAACCAGAGGTG 795
Query 315 -----------AGAAGATACTGAATCACAGTC-----------AAGAACT-------ACTGATGTA-------- 351
||||||.|| |.|| |||| ||.|||| |.||| |||
Sbjct 796 CTTAACAGCTTAGAAGAAAC-GTAT---AGTCCGTTCTTTAGAAACAACTCGGAGAAAATGA-GTATGGAGGAT 864
Query 352 -AAAATAATCG---------GCTTCCT-TAGAAACGTTGAG----------AAAGGAACTCAA-CA-------- 395
||||...||| |.|.||| |.|.|| |||.|| |||..||.|||| ||
Sbjct 865 GAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTAA-GTTCAGTTGTTAAAGTAAAAAAATTCAATCATGATGGAG 937
Query 396 -----GAGGCA-------ATTATTA----TCCCGA-------------------------------CTGCAAAT 422
||||.| ||.|||| ||.||| |||||||.
Sbjct 938 AAGAGGAGGAAGAAGATGATGATTACGGGTCTCGAACAGGAAGCATCTCCAGCAGTGTGTCTGTGCCTGCAAAG 1011
Query 423 C---------GACC---------------------------CAGTAAT-----------GGC------------ 437
| |||| ||..||| |||
Sbjct 1012 CCTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCTAACAAGAATCTGATTTTGAAGGCTATATCTGAAGC 1085
Query 438 ---AGAA----------------------ACTCTGCAGATGAGTCAAGCTGAGATGAGTGAACTGAGTGTGGCA 486
|||| |||||.| ||||||||||||||||||||||||||||
Sbjct 1086 TCAAGAATCCGTAACAAAAACAACTAACTACTCTAC----------AGCTGAGATGAGTGAACTGAGTGTGGCA 1149
Query 487 CAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGGGATGAGTGTGCCTACCA 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150 CAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGGGATGAGTGTGCCTACCA 1223
Query 561 TCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTTTGTTCACCCAAATT 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 TCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTTTGTTCACCCAAATT 1297
Query 635 GTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTAGAAGAATTCCAGTACTGTCT 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 GTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCATGTGAGTAGAAGAATTCCAGTACTGTCT 1371
Query 709 CCAAAAC---CAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAA 779
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 CCAAAACCAGCAGTTGCACCACCAGCACCACCTTCCAGTAGTCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAA 1445
Query 780 GATGGAATGTCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTACAAGACCGGACTGCACATTCT 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 GATGGAATGTCCCTTCTATCATCCAAAACATTGTAGGTTTAACACTCAATGTACAAGACCGGACTGCACATTCT 1519
Query 854 ACCATCCCACCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGCGAA 918
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 ACCATCCCACCATTAATGTCCCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGCGAA 1584
