Nucleotide Global Alignment
Description
- Query:
- TRCN0000470372
- Subject:
- NR_135139.1
- Aligned Length:
- 4458
- Identities:
- 611
- Gaps:
- 3846
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGCAGGAGTTTCCCCGACAGCTGGAGGCTGCGTGGGATCCGGCGGCGGCTCCCGAGCGCGGCGGTGCGGCCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCGCCCCCTCCCTCCCTCCTCCCCCGCCCGCTTCCGCCCGGCTTATTATCCTCCTTATTGACAAACAGAGCG 148
Query 1 ----------------------------------------ATGGGAGACAAGAAGAGCCCCACCAGGCCGAAGC 34
||||||||||||||||||||||||||||||||||
Sbjct 149 GTCGCGGCGGCGACTCTCGGCGTGCGGTGATAGCCAAGCCATGGGAGACAAGAAGAGCCCCACCAGGCCGAAGC 222
Query 35 GGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCGCCGAGGCC 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGGGACTGTAGCGTCTGCACCTTCCGGAACAGCGCCGAGGCC 296
Query 109 TTCAAGTGCATGATGTGCGATGTGCGGAAGGGCACCTCCACCCGATCCACATTGTTTGAAGTTATTGTGAGTGC 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTCAAGTGCATGATGTGCGATGTGCGGAAGGGCACCTCCACCCGATCCACATTGTTTGAAGTTATTGTGAGTGC 370
Query 183 CTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAG-------------------------------- 224
||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGAGATAACAGGAAGAGAGCCTGGTTACCATTTG 444
Query 225 -------------------------------------------------------------------------- 224
Sbjct 445 GTGGAACAATCCTGCTGGCTCAAGCCTCTGCCTAGAAATTTGGGTCATTCTCTTTTTTGGACAGTCTGCTTCTA 518
Query 225 ----------------------------------------------------------------GAAACCTCGA 234
||||||||||
Sbjct 519 AATTACTTTAATTGAAGAGCTTCCCAAGATTCAAGGTGAATTTAAAGTTAAAAGATTGTCATTTGAAACCTCGA 592
Query 235 CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAGTCAAAGAAAGAGAAAAA 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTACACAGTCAAAGAAAGAGAAAAA 666
Query 309 AGATAAAGTAGAAAAAGAAAAAAGTGAAAAGGAAACAACTAGCAAAAAGAATAGCCATAAGAAAACCAGGCCAA 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGATAAAGTAGAAAAAGAAAAAAGTGAAAAGGAAACAACTAGCAAAAAGAATAGCCATAAGAAAACCAGGCCAA 740
Query 383 GATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGGAGATCTGACAGTCATTATTACA 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGGAGATCTGACAGTCATTATTACA 814
Query 457 GACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCCTCTGCAGATCAACACAGTCAAAGCGGCTC 530
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 815 GACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCTTCTGCAGATCAACACAGTCAAAGCGGCTC 888
Query 531 TAGCTCTGATAACACAGAGAGAGGAATGTCCAGGTCATCTTCACCCAGAGGAGAAGCCTCATCATTGAATGGAG 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TAGCTCTGATAACACAGAGAGAGGAATGTCCAGGTCATCTTCACCCAGAGGAGAAGCCTCATCATTGAATGGAG 962
Query 605 AATCTCAT------------------------------------------------------------------ 612
||||||||
Sbjct 963 AATCTCATTAAAGTTTATTTTCTCCAATTTCTTAGTCACTTCTGTCCTACCATGCAAATACACAGATTATGCCA 1036
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1037 AGAGGTACCACATTTTCATGACAGATACATTCATGCACAATCCATAATTTGAGTTTTACATAAAATAGAAATTT 1110
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1111 GTTAGAATTTGTTAGATTTTATTGCAATGATGCCTACCAAACATTTCCAGACTTAACATTTTGGTCTCTGCAGT 1184
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1185 TAAGTGCCATGAAAATGTGGTTGAATTATTCATTATGCAGTGTTATTGGTAAGTGTATTTTCACTTTTAGTTTA 1258
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1259 GTGAATTCTAACACATAATTCTTGAATTCTCTACTATTGGCATGTAACGAATTTAAATTTTTTATAACATAGTG 1332
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1333 CAAGCTGCCTAAATATGTATTATTTGAGAATTGTGAAACAGATAGTTATATGTATACAAGTCAAAGAACAACTT 1406
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1407 AACTATTGCTGCAACAGGTTTTTCTTAATGGTTATCCTCTTAAATACACCTGCTGGTACTTGGTGTGGTTAAAT 1480
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1481 AGGAAAATTGTTATTAAATAAAGAATTTGTATGAACCTTTGCCAATGTTTTTGACACGTTTTACTAATTATTGT 1554
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1555 TCCTGAATTATGTTTCTGGTTTTATCTATTTTTTGAGGTTTTTTTGTTTGCTTATTTTTCAAAACATTCATTTA 1628
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1629 TTGTAATGTTTACTAGCGGACTAGTAAACAATAAAACATTGATTATTTAGCTTTATAATTCAGGTTTAGTGCTA 1702
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1703 TTGTCATTGAACACTGGTATTTTCTGTATCATATAAAACATTAAAATTCAAATAATTATAAGCATTTGGCAAAA 1776
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1777 ACAAGAGAAAAGAAACTTGCCATATTTTACAAGCTGCAATTTTAGAAAAGCTTTAACTTAATGATAGTTTTATC 1850
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1851 ATTGTTTTCTTGTCCCAAACTTATCCAGGGCCATAGAAGTATGAATCTAATTAAAACAGAAATGGGAATTATTG 1924
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1925 CACAGAAATGGGAAATAACTAATTTTAAATCAGTCAAATTGGCTTCTTATTAAATACAATAATTCTTATGAAAA 1998
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1999 TCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGTATCCTGAAAGGAAAAAAGTATAGC 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 CCCACTTATACTATGTAAAATTACCAATAAAATATTTTTATGACTACAGATTTTGCATTTTTGTTTACAACTAT 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 TTAAAGAGTTTTATGTTGTATTTAGAATTTCAACCTAGAAACCACACAGTACTTAAATTCTCCTGGGGTCTCCT 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 GCTTTCTCTTAACCATTTGCTTAATATATATCTACCTAAAGGAGACTTCTGAATTGTAAATGAACTTAAAAATA 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 GAATGTGGATGCAAAATATCACATAAGACATCATGATAACATTTGAAGAAAAAATAAAACTGTAGACCCTAACA 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 GTTGTGATATTTGGTGGTTTCATGTGGTAATGTAATTTTCTGTTTAATTACAGTACTTTTTACAGGCACAGTGG 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 TACTGTCTTTTTTGTAAGATGCTAGTTGTGAAATACAATTAATTGCATACAGTAAAAGTCTGTGATTAAAACAT 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 TTATATACCTCATTCTTTAGTGTTGTTAAATGAAAAATTAAAATTTGTGTTTATTATAAGATACTTTCAATGGA 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 ATACCAGCTAACCAGATATGTTCCTTTAAAACATGAATTTTTTTGTCTTATTCTGTTTTTAACATGTTTCAAAT 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 GTTTTATACATTTTTGGAGATAGTAAAAATTTAAAAATGTAATAGGGAAAATATTTAATTTTTAAGTCAAAAAC 2738
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2739 TATGCTTTAAAGGAATTACATCTTATGATCAAATAACTTTCAGGATGTATTTTAAATGAGCTGCAAGAGAGAAA 2812
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2813 AATCTGACAGGAGATGGGATTTTACCTGAATGGAGCATACTCATATTTCTACATAGGTGGGAAGATACTCATCT 2886
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2887 TTCTACATAGACGGGAACACGGTGTAGCATGGAGATTAAGCGTGCTAACTGACACCTCATGTTTGAATCCTGTT 2960
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2961 GTAGAATGGAAATGAGCTTAAATTACCCAAGCTTACTTTCCATCTATAAAACAGGGCTAATAATGGTAATCACA 3034
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3035 TCTAATTTATAGGGTTTTTGGGAGGATTAAGTCAATCCGTGTAAAATTCTTAATTATCTGACACATACTGGTCA 3108
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3109 CTCAGTAAATGTGAGCTTTTACCATTGTTATAGGTAAAATCCCATTACAAAAATACAAAAATATTTTTTGTAAC 3182
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3183 AGTTATTTTCCTGCCCTCTTGGATGACCTAAAGTAATAGTGTTTTATAGATTTCACTAAATTTTCAGTGTAATA 3256
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3257 TCAGATGTTTTCTCTGGATGCAGAAAGACCATCTTTCCATAATTAAAGAACCTGGTGGGTGTGCACTATGAGAT 3330
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3331 TGGAGAAATGAATTAAGTTGACTTGAAATTATTTTACTTTTATTAATCACAGGTATCTCAACCTGCCTTTGTTT 3404
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3405 CACCCTACTTCAAGTACACTTCCACACCAGGAAAACAGACCCAAATTCCATAAACAGAACTGACGTTAAAATAT 3478
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3479 GCGAAAGATTCAGAACCTAGGTTTAGGGTACATGTTTTTCTCTGTTTCATGAACTTACAGTGTGGTTTGAGCAC 3552
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3553 TGGGTTCTTTTAGCCAAATTCCATACAAAAAGAATTTGGATGTTTTCCAGCATTTATTACCTTACTTTGCTATA 3626
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3627 AGTAAGAGTGAAGATAGGCCGGGTGTGATGGCTCATGCCAGTAATCCCAGCACTTTGGGCTGAAGCAGGCAGAT 3700
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3701 ATTTTGAGCCCAGGACCAGCCTGGGCAACATGGTGAAAGCTCATCTCTATGAAAAAATTTGAATATACATATAT 3774
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3775 ATATATATGTATATTTAAAAAGTGAATATAATTTGAGGCACAGAAGAATATTCTTAAAACCTTTTGTATTATAC 3848
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3849 AATAGAAATAAAGGTTTTATTTTTATTAAATGCTTTCCTAAAATGATAGTGGATAATAGACAAAGTGAAAACAT 3922
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3923 TTAAAAAGGAAGAGAAACTTCAGCCTTTCTAAGTTGATAGCATGTTTATTAACTTTTAGATAAAGATCCTTATA 3996
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3997 GACTGAAAGAATGTAGCCTCTGCATTAATGGTAAATGGTCTAGAAGTTTTCGTTTCCACTGAGGCTTCCGCCAC 4070
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4071 TCGCTTTTTTAAACTTCCTGCTATGGTTTGGATATGGTTTGTCCTCACCAAAACTCATGCTGAGGCCTGAGTCC 4144
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4145 CCAGTTTGATTGTGTTGGTAGGTGGTGCCTTTAAGAGGTGATTAGGTCATTGAGATGGATTAAAGGCTTTCTCA 4218
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4219 TGAGGCTCAGTTAGTTCTGGAATGGATTCGCTCTTGCAGGAATGGATGAATTCTCACAAGAGTGGGTTGTTATG 4292
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4293 AAGTGAGGATGCTTCTTGTGTTCTGTTCTCTTTGCCCTCCTCAGTTCACCATCTGCTTTCCACCATGAGTTGAA 4366
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4367 GCAGCATGAGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCTCAGCCTTTGGACTCATAAGCCAAAATAA 4440
Query 613 ------------------ 612
Sbjct 4441 ATCTGTTTTCTTTATAAA 4458
