Nucleotide Global Alignment
Description
- Query:
- TRCN0000470372
- Subject:
- XR_001748537.1
- Aligned Length:
- 2846
- Identities:
- 611
- Gaps:
- 2234
Alignment
Query 1 --------------------------------------------------------------------ATGGGA 6
||||||
Sbjct 1 ATTATCCTCCTTATTGACAAACAGAGCGGTCGCGGCGGCGACTCTCGGCGTGCGGTGATAGCCAAGCCATGGGA 74
Query 7 GACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGGGACTGTAGCGT 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GACAAGAAGAGCCCCACCAGGCCGAAGCGGCAGCCGAAGCCGTCCTCGGATGAGGGTTACTGGGACTGTAGCGT 148
Query 81 CTGCACCTTCCGGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGATGTGCGGAAGGGCACCTCCACCC--- 151
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGCACCTTCCGGAACAGCGCCGAGGCCTTCAAGTGCATGATGTGCGATGTGCGGAAGGGCACCTCCACCCGGG 222
Query 152 -------------------------------------------------------------------------- 151
Sbjct 223 ACAGCAAGGAAGGGGGGAAGCTGGTGTCCTACTCCACAGCCAGTCTTGGGGTTAGAGGAACCCTGAGAAATAGA 296
Query 152 -------------------------------------------------------------------------- 151
Sbjct 297 GTAGGTGGTGGCAGCTCAGAAGAGAAGAAACAGGCTGAATACCTGGCACCTGGAAGAAGAAGGAATATAGTACA 370
Query 152 -------------------------------------------------------------------------- 151
Sbjct 371 CAGGGGAGTTGGCCCAGGACAGAGAAGTGGGCCTAGTTTAAAAGAGGCTTGAGGCCCACATGGGGGCCCCTGAC 444
Query 152 -------------------------------------------------------------------------- 151
Sbjct 445 ATTTTTTTTTTTTACCAGTACATCTAAGCTCTTGTAGATCCAATTTTTAGTGGTGGAAACATTACTTGAGGAGG 518
Query 152 -------------------------------------------------------------------------- 151
Sbjct 519 ACTCAGAGAAGCATTGTCATTTGGATTGAAACTGAAGAGGCTCTGGGCAACTCACCAGAAATCTAAGGGACACT 592
Query 152 -------------------------------------------------------------------------- 151
Sbjct 593 GTGTTCCTGAAAAATGAAGAATCATGAAATCATAAGTTTCTTGAAGGAAGGAGGTGATTATTTAGAAGCATGAT 666
Query 152 -------------------------------------------------------------GATCCACATTGTT 164
|||||||||||||
Sbjct 667 GAGAAGAAAAAGCTGGATCACTTACCAGTAACTGGAGTTCTCCTATTGGGTAATCTCCACAGATCCACATTGTT 740
Query 165 TGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAA--------------- 223
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGAAGTTATTGTGAGTGCCTCGAGGACCAAGGAACCGTTGAAATTTCCAATTTCAGGAAGTTCCAGTGGATGCC 814
Query 224 -------------------------------------------------------------------------- 223
Sbjct 815 CATCAGGAAGATTCTCATGCTGAACAGAAGGGCAAGAGAGGTGGATCTGTGAGGGAAAAGACCCAATAGGATAA 888
Query 224 -----------GGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTA 286
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTCAAGTTACTGGAAACCTCGACCTGTCTCCCAGTTGGTTGCACAGCAGGTTACTCAGCAGTTTGTGCCTCCTA 962
Query 287 CACAGTCAAAGAAAGAGAAAAAAGATAAAGTAGAAAAAGAAAAAAGTGAAAAGGAAACAACTAGCAAAAAGAAT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACAGTCAAAGAAAGAGAAAAAAGATAAAGTAGAAAAAGAAAAAAGTGAAAAGGAAACAACTAGCAAAAAGAAT 1036
Query 361 AGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGG 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCCATAAGAAAACCAGGCCAAGATTGAAAAATGTGGATCGGAGTAGTGCTCAGCATTTGGAAGTTACTGTTGG 1110
Query 435 AGATCTGACAGTCATTATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCCTCTGCAG 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1111 AGATCTGACAGTCATTATTACAGACTTTAAGGAGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCTTCTGCAG 1184
Query 509 ATCAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGGTCATCTTCACCCAGAGGA 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATCAACACAGTCAAAGCGGCTCTAGCTCTGATAACACAGAGAGAGGAATGTCCAGGTCATCTTCACCCAGAGGA 1258
Query 583 GAAGCCTCATCATTGAATGGAGAATCTCAT-------------------------------------------- 612
||||||||||||||||||||||||||||||
Sbjct 1259 GAAGCCTCATCATTGAATGGAGAATCTCATTAAAGTTTATTTTCTCCAATTTCTTAGTCACTTCTGTCCTACCA 1332
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1333 TGCAAATACACAGATTATGCCAAGAGGTACCACATTTTCATGACAGATACATTCATGCACAATCCATAATTTGA 1406
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1407 GTTTTACATAAAATAGAAATTTGTTAGAATTTGTTAGATTTTATTGCAATGATGCCTACCAAACATTTCCAGAC 1480
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1481 TTAACATTTTGGTCTCTGCAGTTAAGTGCCATGAAAATGTGGTTGAATTATTCATTATGCAGTGTTATTGGTAA 1554
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1555 GTGTATTTTCACTTTTAGTTTAGTGAATTCTAACACATAATTCTTGAATTCTCTACTATTGGCATGTAACGAAT 1628
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1629 TTAAATTTTTTATAACATAGTGCAAGCTGCCTAAATATGTATTATTTGAGAATTGTGAAACAGATAGTTATATG 1702
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1703 TATACAAGTCAAAGAACAACTTAACTATTGCTGCAACAGGTTTTTCTTAATGGTTATCCTCTTAAATACACCTG 1776
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1777 CTGGTACTTGGTGTGGTTAAATAGGAAAATTGTTATTAAATAAAGAATTTGTATGAACCTTTGCCAATGTTTTT 1850
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1851 GACACGTTTTACTAATTATTGTTCCTGAATTATGTTTCTGGTTTTATCTATTTTTTGAGGTTTTTTTGTTTGCT 1924
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1925 TATTTTTCAAAACATTCATTTATTGTAATGTTTACTAGCGGACTAGTAAACAATAAAACATTGATTATTTAGCT 1998
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1999 TTATAATTCAGGTTTAGTGCTATTGTCATTGAACACTGGTATTTTCTGTATCATATAAAACATTAAAATTCAAA 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 TAATTATAAGCATTTGGCAAAAACAAGAGAAAAGAAACTTGCCATATTTTACAAGCTGCAATTTTAGAAAAGCT 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 TTAACTTAATGATAGTTTTATCATTGTTTTCTTGTCCCAAACTTATCCAGGGCCATAGAAGTATGAATCTAATT 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 AAAACAGAAATGGGAATTATTGCACAGAAATGGGAAATAACTAATTTTAAATCAGTCAAATTGGCTTCTTATTA 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 AATACAATAATTCTTATGAAAATCATAGTACCCTATTTTCAGACACAGCTGCCAGTTTACACATTTCTCAGTAT 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 CCTGAAAGGAAAAAAGTATAGCCCCACTTATACTATGTAAAATTACCAATAAAATATTTTTATGACTACAGATT 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 TTGCATTTTTGTTTACAACTATTTAAAGAGTTTTATGTTGTATTTAGAATTTCAACCTAGAAACCACACAGTAC 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 TTAAATTCTCCTGGGGTCTCCTGCTTTCTCTTAACCATTTGCTTAATATATATCTACCTAAAGGAGACTTCTGA 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 ATTGTAAATGAACTTAAAAATAGAATGTGGATGCAAAATATCACATAAGACATCATGATAACATTTGAAGAAAA 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 AATAAAACTGTAGACCCTAACAGTTGTGATATTTGGTGGTTTCATGTGGTAATGTAATTTTCTGTTTAATTACA 2738
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2739 GTACTTTTTACAGGCACAGTGGTACTGTCTTTTTTGTAAGATGCTAGTTGTGAAATACAATTAATTGCATACAG 2812
Query 613 ---------------------------------- 612
Sbjct 2813 TAAAAGTCTGTGATTAAAACATTTATATACCTCA 2846
