Nucleotide Global Alignment

Description

Query:
TRCN0000470394
Subject:
NM_001033604.1
Aligned Length:
2558
Identities:
920
Gaps:
1630

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCTTTATTTAAAGCCCGTGATTGGTGGTCTACTATTCTGGGAGATAAAGAAGAATTTGATCAAGGCTGTTT  74

Query    1  -------------------------------------------------------------ATGGGATACCTAA  13
                                                                         |||||||||||||
Sbjct   75  GTGTCTGGCTAATGTTGACAATAGTGGAAATGGACAAGATAAAATAATTGTGGGTAGCTTTATGGGATACCTAA  148

Query   14  GGATCTTTAGCCCCCATCCTGCAAAAACAGGAGATGGAGCTCAAGCCGAAGATTTGCTTCTAGAAGTGGATCTA  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGATCTTTAGCCCCCATCCTGCAAAAACAGGAGATGGAGCTCAAGCCGAAGATTTGCTTCTAGAAGTGGATCTA  222

Query   88  CGAGATCCAGTACTTCAAGTGGAAGTAGGAAAGTTTGTTTCAGGTACCGAAATGCTACATTTGGCTGTGTTACA  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGAGATCCAGTACTTCAAGTGGAAGTAGGAAAGTTTGTTTCAGGTACCGAAATGCTACATTTGGCTGTGTTACA  296

Query  162  TTCTAGAAAACTTTGTGTCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAACCAATGTCAGATGA  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTCTAGAAAACTTTGTGTCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAACCAATGTCAGATGA  370

Query  236  AATTGATGTATGAACATAATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGGTGGTGTAAAAGGT  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATTGATGTATGAACATAATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGGTGGTGTAAAAGGT  444

Query  310  CGAGATTTAATTTGCATCCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCTATGCTTTTGGAAG  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGAGATTTAATTTGCATCCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCTATGCTTTTGGAAG  518

Query  384  ATTTCTCCCTGGCTTTCTTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTCCTTACTGTCTCTT  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATTTCTCCCTGGCTTTCTTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTCCTTACTGTCTCTT  592

Query  458  CCTGCCAACAAGTGGAAAGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAAAAGGCAGGAGACT  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCTGCCAACAAGTGGAAAGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAAAAGGCAGGAGACT  666

Query  532  GAACAGCAAAAACTTGGTTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAGAGCAAGCCCTTGA  605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAACAGCAAAAACTTGGTTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAGAGCAAGCCCTTGA  740

Query  606  CATATGTATTGTCTCTTTCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAACTTTTTTTGCCTTA  679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CATATGTATTGTCTCTTTCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAACTTTTTTTGCCTTA  814

Query  680  AGGATAATGGACAAATTCGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCCATATTGCTCAGTT  753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGGATAATGGACAAATTCGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCCATATTGCTCAGTT  888

Query  754  TCTGAAGGAACAATAAATACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAGATGTGACACTGAA  827
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TCTGAAGGAACAATAAATACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAGATGTGACACTGAA  962

Query  828  GTGGGCCACCCAACTTCCCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCA--ATTT--------------  885
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||              
Sbjct  963  GTGGGCCACCCAACTTCCCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCATGATTTAAAGGGAGTGATAG  1036

Query  886  ----TCT------TTATGGAAGCATTTG--------TTGCCT------CGATC--------TTCCA--------  919
                |||      |.||||  .||.|||        .|.|||      .||||        |||||        
Sbjct 1037  TCACTCTGAGTGATGATGG--TCACTTGCAGTGTTCATACCTGGGGACAGATCCTTCTCTGTTCCAAGCTCCAA  1108

Query  920  ---------CTTTAGAA--AAA----------------------------------------------------  930
                     ||..||||  |||                                                    
Sbjct 1109  ACGTTCAATCTCGAGAACTAAACTATGATGAACTTGATGTAGAAATGAAAGAACTTCAGAAAATCATCAAAGAT  1182

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1183  GTTAACAAATCACAAGGTGTTTGGCCCATGACTGAGAGAGAAGATGACTTGAACGTTTCTGTCGTGGTTTCTCC  1256

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1257  TAACTTTGATTCAGTTTCTCAAGCGACCGATGTTGAGGTGGGAACTGACCTTGTCCCTTCTGTCACGGTGAAGG  1330

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1331  TCACACTGCAGAACAGAGTGATATTGCAAAAAGCCAAATTATCAGTCTACGTGCAACCACCATTAGAATTGACT  1404

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1405  TGTGATCAGTTCACCTTTGAATTTATGAATCGAAATCCTGATGGCATTCCGCGAGTTATCCAATGTAAATTTAG  1478

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1479  ACTTCCCCTAAAGTTAATTTGCCTACCAGGTCAGCCTTCAAAAACTGCAAGCCACAAAATTACTATTGATACCA  1552

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1553  ACAAATCTCCAGTCAGTCTTCTTAGTCTCTTCCCAGGTTTTGCCAGTCAGTCAGATGATGATCAGGTGAATGTA  1626

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1627  ATGGGTTTTCACTTCTTAGGAGGTGCTCGAATTACTGTTCTTGCTTCCAAAACTTCTCAACGATATCGCATTCA  1700

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1701  GAGTGAACAATTTGAAGATCTTTGGCTCATAACCAATGAGCTTATTCTTCGCCTTCAAGAATATTTTGAAAAAC  1774

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1775  AGGGAGTCAAAGATTTTGCATGTTCTTTTTCGGGATCTATACCCCTTCAAGAATATTTTGAGTTGATTGATCAT  1848

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1849  CATTTTGAGCTACGGATAAATGGTGAAAAATTAGAAGAACTCTTATCTGAGAGAGCTGTACAATTTCGGGCCAT  1922

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1923  TCAACGCCGGCTACTAGCAAGATTCAAAGATAAAACTCCTGCCCCTCTTCAACACCTGGACACCTTGTTAGATG  1996

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1997  GAACCTACAAGCAGGTAATTGCTCTAGCAGATGCAGTGGAGGAAAACCAAGGCAATCTGTTCCAGTCATTCACC  2070

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2071  AGGCTGAAGAGTGCCACCCATTTGGTGATTCTGCTGATCGCGCTGTGGCAGAAGCTTAGTGCTGACCAGGTTGC  2144

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2145  TATTCTGGAAGCGGCATTTCTGCCGCTACAAGAAGACACTCAAGAATTGGGCTGGGAAGAAACGGTGGATGCCG  2218

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2219  CCATTTCCCACCTGTTGAAGACTTGCCTGTCGAAGAGTTCTAAGGAGCAGGCTTTGAACCTCAACAGCCAGCTG  2292

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2293  AACATACCCAAAGACACAAGCCAACTGAAGAAACATATCACCTTGCTCTGCGATAGATTATCCAAAGGTGGCCG  2366

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2367  TCTCTGCCTAAGTACCGATGCAGCAGCCCCACAGACCATGGTCATGCCAGGTGGTTGTACTACAATCCCAGAGT  2440

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2441  CAGACCTAGAAGAAAGATCAGTAGAACAAGACTCTACAGAACTGTTTACCAACCACAGACATCTCACTGCAGAG  2514

Query  931  ------------------------------------------  930
                                                      
Sbjct 2515  ACACCCAGGCCTGAAGTTTCACCCCTCCAAGGAGTCTCGGAA  2556

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