Nucleotide Global Alignment

Description

Query:
TRCN0000470462
Subject:
XM_006516766.4
Aligned Length:
4581
Identities:
901
Gaps:
3609

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCGAGTAGCTCGGACACGGCGCTGGGGGGAGGCGGGGGCCTGAGCTGGGCCGAGAAGAAGTTGGAGGAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGCAAGCGGAGGCGATTCCTGTCCCCTCAGCAGCCGCCGCTGCTGTTGCCGCTCCTGCAGCCGCAGCTCCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AACCGCCGCCGCCCCCGCCGCCTCTGCTCTTCCTGGCTGCCCCCGGCGCGGCCGCCGCCGCAGCCGCCGCCGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGGCCTCCTCCTCTTGCTTCAGCCCGGGCCCTCCTCTGGAGGTCAAGCGGCTGGCGAGAGGCAAGAGGCGCCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGGAGGGCGGCAGAAGCGGCGCCGCGGGCCCCGCGCCGGGCAGGAGGCGGAGAAGCGCCGGGTCTTCTCGCTGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCCAGCCGCAGCAGGACGGCGGTGGCGGTGCCAGTAGCGGCGGGGGTGTGACCCCGCTGGTGGAGTACGAGGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGAGCTCCCAGTCCGAGCAGGGGCTGCTGCTGGGGGGCGCCAGCGCGGCAACGGCGGCGACGGCTGCCGGGGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AACGGGGGGCAACGGCGGGAGTCCGGCCTCCTCCTCCGGCACGCAGAGGCGCGCGGAGGGGTCGGAGCGCAGGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CGCGCCGGGACCGCCGCAGCAGCAGCGGCCGCAGCAAGGAGCGCCACCGCGAGCACCGGCGGCGGGACGGGACG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGCAGCGGCAGCGAGGCCTCAAAGGCCCGCAGCCGCCACGGACACAGCGGCGAGGAGCGGGCGGAGGCCGCCAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAGCGGCAGCAGCAGCAGCAGCGGCGGCCGCCGCAAGAGCGCGTCGGCTACGTCCAGCAGCAGTAGCAGCCGCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGGACCGGGACCTCAAGGCCCACCGCAGCCGGACTAAGTCGTCCAAGGAACCGCCCTCGGCCTACAAGGAGCCG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCCAAGGCCTACCGGGAGGACAAGAGCGAGCCGAAGGCCTACAGGCGGCGGCAGCGGTCCCTGAGCCCGCTGGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGGCCGGGACGAAAGCCCGGTGTCCCACAGGGCCTCGCAGAGCCTTCGGAGCCGCAAGTCCCCCAGTCCGGCGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GAGGTGGCAGCAGTCCTTATTCCCGGCGGCTGCCGCGCTCCCCGAGCCCCTATAGCCGGCGCCGCTCGCCCAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TACAGCCGCCACAGCTCCTACGAGCGGGGCGGCGACGTATCCCCCAGCCCGTACAGCAGCAGCAGCTGGCGGCG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTCGCGCAGCCCCTACAGCCCAGTACTCAGACGATCTGCCAAATCCCGAAGCAGAAGCCCATATTCATCTAGGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACTCAAGATCTCGGAGCAGGCACAGATTGTCTAGATCAAGAAGTCGTCATTCAAGCATTTCTCCTAGCACACTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACTCTGAAGAGTAGCTTGGCAGCTGAATTGAACAAGAATAAAAAGGCACGAGCTGCAGAGGCAGCAAGAGCTGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGAGGCAGCAAAAGCTGCAGAAGCTGCTAAGGCTGCTGAAGCAGCTGCCAAAGCTGCCAAAGCCTCAAATGCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTACACCTACCAAGGGGAACACAGAAACTGGTGCCAGTGTCTCACAGACAAACCATGTGAAGGAAGTCAAAAAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTTAAAACTGAGCATGCACCTTCTCCTTCAAGTGGTGGGACCGTCAAAAGCGACAAAGCAAAAACAAAGCCACC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCTTCAAGTAACAAAGGTAGACAATAATTTGACAGTAGAGAAAGCCACCAAGAAAACAGTTGTTGGGAAGGAGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTAAACCTGCTGCTACAAAGGAAGAACCAGTTTCCACTAAAGAGAAAAGCAAGCCACTCACACCAAGCACAGGA  1776

Query    1  ------------------------------------------------------------------ATGCTGCC  8
                                                                              ||||||||
Sbjct 1777  GCCAAGGAGAAGGAGCAGCATGTGGCTTTAGTGACCTCTACGTTACCGCCATTACCTTTGCCTCCCATGCTGCC  1850

Query    9  TGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAAC  82
            ||||||||||||.||||||||||||.||||.||.|||||.||.|||||||||||||||||||||||||||||||
Sbjct 1851  TGAAGATAAAGATGCTGATAGCTTAAGAGGCAACATTTCTGTCAAAGCAGTTAAAAAAGAAGTAGAAAAGAAAC  1924

Query   83  TCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGAGTCCAGAG  156
            ||||||||||.||||||||||||||..|||||||||||.||||||||||||||||||||||.||||||||||||
Sbjct 1925  TCCGATGTCTGCTTGCTGATTTACCATTGCCCCCTGAGTTACCAGGAGGAGATGATCTTTCCAAGAGTCCAGAG  1998

Query  157  GAAAAGAAAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAACCAA  230
            ||.||||||||||||.|||||||||||||.|||.|.||||||||||||||||||||||||||||||||||.|||
Sbjct 1999  GAGAAGAAAACAGCAGCACAGTTACATAGCAAACGAAGGCCTAAAATATGTGGGCCTCGCTATGGTGAAATCAA  2072

Query  231  AGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTT  304
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AGAAAAAGATATTGACTGGGGGAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTT  2146

Query  305  ACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTCTGGATAAT  378
            |.|||||||||||||||||||||||.||||||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 2147  ATGGACAAGTTTACAAAGCCAGGGACAAAGACACGGGAGAAATGGTAGCCTTAAAGAAAGTACGTCTGGATAAT  2220

Query  379  GAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAGAGTATTAT  452
            ||||||||.||.||.|||||||||||||||.||||||||||||||||.|||||.||.|||||.||||||||.||
Sbjct 2221  GAAAAGGAGGGTTTCCCAATTACAGCAATTAGAGAAATTAAAATTCTTCGGCAACTCACCCACCAGAGTATCAT  2294

Query  453  CAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGGTGCATTTTATCTGG  526
            |||||||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||||||||.||||
Sbjct 2295  CAATATGAAGGAAATCGTGACTGATAAAGAAGATGCTTTGGATTTTAAGAAAGACAAAGGTGCATTTTACCTGG  2368

Query  527  TGTTTGAATATATGGACCATGATCTGATGGGACTACTGGAATCAGGCTTGGTTCATTTTAATGAAAATCACATA  600
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.|||
Sbjct 2369  TGTTTGAATATATGGACCATGATCTGATGGGACTGCTGGAATCAGGCTTGGTTCATTTTAATGAAAACCATATA  2442

Query  601  AAGTCATTTATGAGACAGCTCATGGAGGGTCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGAGATATTAA  674
            ||.||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  AAATCTTTTATGAGACAGCTCATGGAAGGCCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGAGATATTAA  2516

Query  675  ATGTTCCAATATCCTTCTAAATAATAGAGGGCAGATAAAACTTGCAGACTTTGGACTTGCTCGATTGTATAGCT  748
            ||||||.|||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.||.|||||||
Sbjct 2517  ATGTTCAAATATCCTTCTAAATAATAGAGGACAGATAAAACTTGCAGATTTTGGACTTGCTCGTTTATATAGCT  2590

Query  749  CAGAAGAAAGTCGGCCGTATACTAACAAGGTAATTACTTTATGGTACCGTCCACCTGAACTGCTACTGGGAGAA  822
            |||||||||||||.||.||||||||||||||.||||||||.|||||.||||||||||||.||||..||||||||
Sbjct 2591  CAGAAGAAAGTCGCCCATATACTAACAAGGTCATTACTTTGTGGTATCGTCCACCTGAATTGCTCTTGGGAGAA  2664

Query  823  GAACGATACACACCAGCCATTGATGTATGGAGCTGTGGCTGTATCCTTGGCGAACTCTTCACTAAAAAACCTAT  896
            ||||||||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||
Sbjct 2665  GAACGATATACACCAGCCATTGATGTATGGAGCTGTGGATGTATCCTTGGTGAACTCTTCACTAAAAAACCTAT  2738

Query  897  ATTTCAAGCAAATCAGGAACTTGCACAACTAGAATTAATAAG----ACATGAAGAA--------AATGAAGTTT  958
            ||||||||||||.||||||||||||||.|||||..|||||||    |.|||..|.|        ..||.|||.|
Sbjct 2739  ATTTCAAGCAAACCAGGAACTTGCACAGCTAGAGCTAATAAGCCGTATATGTGGGAGTCCATGTCCTGCAGTGT  2812

Query  959  ---CTGA--TAAACAAA----------TC---------------------------------------------  972
               ||||  |||.||||          ||                                             
Sbjct 2813  GGCCTGATGTAATCAAACTGCCATATTTCAACACCATGAAACCAAAGAAGCAATATCGGCGGAAGTTAAGAGAA  2886

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2887  GAATTTGTTTTCATCCCCGCAGCTGCACTCGACTTATTCGATTACATGCTTGCCTTGGATCCCAGTAAGCGCTG  2960

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2961  CACTGCTGAGCAGGCTCTTCAGTGTGAGTTCCTGCGAGACGTGGAACCCTCCAAAATGCCTCCACCAGAGAGGT  3034

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3035  TTTTACACGCTGAGGCAATGCACCATAGTAAGATGGCTGAGAGCCTTCCTTTGTGGCAAGATTGTCATGAATTA  3108

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3109  TGGAGTAAAAAGAGAAGAAGACAGAAACAGATGGGCATGACTGATGATCTTTCCACAATCAAAGCCCCTAGGAA  3182

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3183  GGACCTGTCTCTGGGCTTAGATGACAGCAGAACTAACACACCCCAGGGTGTGCTGCCACCCGCACAGTTGAAAT  3256

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3257  CTCAGAGCAACTCAAATGTAGCACCTGTAATAACAGGCCCTGGACAGCCGTTAAACCACAGTGAATTGGCAATT  3330

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3331  CTTCTAAACCTACTACAATCTAAATCAAGTGTTAATATGGCTGATTTTGTCCAAGTGTTGAACATTAAGGTAAA  3404

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3405  CTCTGAGACTCAACAGCAGCTAAATAAAATAAACCTTCCTGCTGGAATTTTGGCAACAGGTGAAAAACAGACAG  3478

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3479  ATCCATCAACACCACAACAGGAGTCTTCAAAATCATTGGGAGGAGTTCAGCCTTCACAGACCATCCAGCCTAAA  3552

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3553  GTGGAAACTGATGCTGCCCAGGCTGCTGTGCAGAGTGCATTTGCAGTCCTCTTGACTCAGTTAATAAAGGCCCA  3626

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3627  ACAGTCCAAACAGAAAGATGCCATGCTAGAGGAAAGGGAAAATGGATCAGGACATGAAGCTCCATTGCAACTCA  3700

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3701  GGCCTCCTCTAGAACCGAGCACTCCTGGATCCGGGCAAGATGACCTCATCCAGCACCAAGACAGGAGGATATTG  3774

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3775  GAGCTGACACCAGAACCAGACCGGCCTCGAATTCTGCCTCCTGATCAACGGCCTCCTGAACCTCCTGAACCACC  3848

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3849  ACCAGTTACTGAGGAGGACCTAGATTATCGGACAGAAAACCAGCATGTTCCTACCACTAGTTCTTCATTAACTG  3922

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3923  ACCCACATGCTGGAGTGAAGGCAGCCCTCTTACAGCTGCTTGCTCAGCATCAGCCCCAGGATGATCCCAAAAGA  3996

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 3997  GAAGGTGGTATCGATTATCCCACAGGAGACACATATGTGCCCAGTTCAGACTATAAGGACAACTTTGGATCTTC  4070

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 4071  TTTCTCTGCCGCTCCTTACGTTAGCAGTGATGGTCTAGGAAGTAGCTCCGCTGCTGCACCATTGGAAGCACGTA  4144

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 4145  GTTTCATTGGAAACTCAGATATTCAGTCTCTGGATAACTACAGTACTGCTTCATCTCACACTGGTGGTCCACCT  4218

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 4219  CAAACTTCTGCCTTTACTGAGTCGTTTGCCAGTTCAGTAGCTGGATATGGAGACATTTACCTCAATGCTGGTCC  4292

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 4293  CATGTTGTTTAGTGGAGACAAGGACCATAGATTTGAATATAGCCATGGTCCTATCACAGTCCTCACAAACAGCA  4366

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 4367  ATGACCCTTCCACAGGGCCAGAGAGTACTCATCCCTTGCCAGCAAAGATGCACAACTATAACTATGGTGGTAAC  4440

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 4441  TTACAGGAAAATCCAGGTGGCCCTAGCCTCATGCATGGACAGACCTGGACTTCTCCTGCCCAAGGACCTGGATA  4514

Query  973  -------------------------------------------------------------------  972
                                                                               
Sbjct 4515  TTCACAAGGATACAGGGGACACATTAGCACATCAGCTGGCAGAGGTCGAGGCAGAGGGTTACCATAC  4581

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