Nucleotide Global Alignment

Description

Query:
TRCN0000470462
Subject:
XM_011244344.3
Aligned Length:
2739
Identities:
901
Gaps:
1767

Alignment

Query    1  ATGCTGCCTGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGA  74
            ||||||||||||||||||||.||||||||||||.||||.||.|||||.||.|||||||||||||||||||||||
Sbjct    1  ATGCTGCCTGAAGATAAAGATGCTGATAGCTTAAGAGGCAACATTTCTGTCAAAGCAGTTAAAAAAGAAGTAGA  74

Query   75  AAAGAAACTCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGA  148
            ||||||||||||||||||.||||||||||||||..|||||||||||.||||||||||||||||||||||.||||
Sbjct   75  AAAGAAACTCCGATGTCTGCTTGCTGATTTACCATTGCCCCCTGAGTTACCAGGAGGAGATGATCTTTCCAAGA  148

Query  149  GTCCAGAGGAAAAGAAAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGT  222
            ||||||||||.||||||||||||.|||||||||||||.|||.|.||||||||||||||||||||||||||||||
Sbjct  149  GTCCAGAGGAGAAGAAAACAGCAGCACAGTTACATAGCAAACGAAGGCCTAAAATATGTGGGCCTCGCTATGGT  222

Query  223  GAAACCAAAGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGA  296
            ||||.||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAATCAAAGAAAAAGATATTGACTGGGGGAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGA  296

Query  297  AGGTACTTACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTC  370
            |||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||||.||||||||||
Sbjct  297  AGGTACTTATGGACAAGTTTACAAAGCCAGGGACAAAGACACGGGAGAAATGGTAGCCTTAAAGAAAGTACGTC  370

Query  371  TGGATAATGAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAG  444
            ||||||||||||||||.||.||.|||||||||||||||.||||||||||||||||.|||||.||.|||||.|||
Sbjct  371  TGGATAATGAAAAGGAGGGTTTCCCAATTACAGCAATTAGAGAAATTAAAATTCTTCGGCAACTCACCCACCAG  444

Query  445  AGTATTATCAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGGTGCATT  518
            |||||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct  445  AGTATCATCAATATGAAGGAAATCGTGACTGATAAAGAAGATGCTTTGGATTTTAAGAAAGACAAAGGTGCATT  518

Query  519  TTATCTGGTGTTTGAATATATGGACCATGATCTGATGGGACTACTGGAATCAGGCTTGGTTCATTTTAATGAAA  592
            |||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  519  TTACCTGGTGTTTGAATATATGGACCATGATCTGATGGGACTGCTGGAATCAGGCTTGGTTCATTTTAATGAAA  592

Query  593  ATCACATAAAGTCATTTATGAGACAGCTCATGGAGGGTCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGA  666
            |.||.|||||.||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||
Sbjct  593  ACCATATAAAATCTTTTATGAGACAGCTCATGGAAGGCCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGA  666

Query  667  GATATTAAATGTTCCAATATCCTTCTAAATAATAGAGGGCAGATAAAACTTGCAGACTTTGGACTTGCTCGATT  740
            ||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.||
Sbjct  667  GATATTAAATGTTCAAATATCCTTCTAAATAATAGAGGACAGATAAAACTTGCAGATTTTGGACTTGCTCGTTT  740

Query  741  GTATAGCTCAGAAGAAAGTCGGCCGTATACTAACAAGGTAATTACTTTATGGTACCGTCCACCTGAACTGCTAC  814
            .||||||||||||||||||||.||.||||||||||||||.||||||||.|||||.||||||||||||.||||..
Sbjct  741  ATATAGCTCAGAAGAAAGTCGCCCATATACTAACAAGGTCATTACTTTGTGGTATCGTCCACCTGAATTGCTCT  814

Query  815  TGGGAGAAGAACGATACACACCAGCCATTGATGTATGGAGCTGTGGCTGTATCCTTGGCGAACTCTTCACTAAA  888
            ||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||
Sbjct  815  TGGGAGAAGAACGATATACACCAGCCATTGATGTATGGAGCTGTGGATGTATCCTTGGTGAACTCTTCACTAAA  888

Query  889  AAACCTATATTTCAAGCAAATCAGGAACTTGCACAACTAGAATTAATAAG----ACATGAAGAA--------AA  950
            ||||||||||||||||||||.||||||||||||||.|||||..|||||||    |.|||..|.|        ..
Sbjct  889  AAACCTATATTTCAAGCAAACCAGGAACTTGCACAGCTAGAGCTAATAAGCCGTATATGTGGGAGTCCATGTCC  962

Query  951  TGAAGTTT---CTGA--TAAACAAA----------TC-------------------------------------  972
            ||.|||.|   ||||  |||.||||          ||                                     
Sbjct  963  TGCAGTGTGGCCTGATGTAATCAAACTGCCATATTTCAACACCATGAAACCAAAGAAGCAATATCGGCGGAAGT  1036

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1037  TAAGAGAAGAATTTGTTTTCATCCCCGCAGCTGCACTCGACTTATTCGATTACATGCTTGCCTTGGATCCCAGT  1110

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1111  AAGCGCTGCACTGCTGAGCAGGCTCTTCAGTGTGAGTTCCTGCGAGACGTGGAACCCTCCAAAATGCCTCCACC  1184

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1185  AGAGAGGTTTTTACACGCTGAGGCAATGCACCATAGTAAGATGGCTGAGAGCCTTCCTTTGTGGCAAGATTGTC  1258

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1259  ATGAATTATGGAGTAAAAAGAGAAGAAGACAGAAACAGATGGGCATGACTGATGATCTTTCCACAATCAAAGCC  1332

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1333  CCTAGGAAGGACCTGTCTCTGGGCTTAGATGACAGCAGAACTAACACACCCCAGGGTGTGCTGCCACCCGCACA  1406

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1407  GTTGAAATCTCAGAGCAACTCAAATGTAGCACCTGTAATAACAGGCCCTGGACAGCCGTTAAACCACAGTGAAT  1480

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1481  TGGCAATTCTTCTAAACCTACTACAATCTAAATCAAGTGTTAATATGGCTGATTTTGTCCAAGTGTTGAACATT  1554

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1555  AAGGTAAACTCTGAGACTCAACAGCAGCTAAATAAAATAAACCTTCCTGCTGGAATTTTGGCAACAGGTGAAAA  1628

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1629  ACAGACAGATCCATCAACACCACAACAGGAGTCTTCAAAATCATTGGGAGGAGTTCAGCCTTCACAGACCATCC  1702

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1703  AGCCTAAAGTGGAAACTGATGCTGCCCAGGCTGCTGTGCAGAGTGCATTTGCAGTCCTCTTGACTCAGTTAATA  1776

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1777  AAGGCCCAACAGTCCAAACAGAAAGATGCCATGCTAGAGGAAAGGGAAAATGGATCAGGACATGAAGCTCCATT  1850

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1851  GCAACTCAGGCCTCCTCTAGAACCGAGCACTCCTGGATCCGGGCAAGATGACCTCATCCAGCACCAAGACAGGA  1924

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1925  GGATATTGGAGCTGACACCAGAACCAGACCGGCCTCGAATTCTGCCTCCTGATCAACGGCCTCCTGAACCTCCT  1998

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 1999  GAACCACCACCAGTTACTGAGGAGGACCTAGATTATCGGACAGAAAACCAGCATGTTCCTACCACTAGTTCTTC  2072

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2073  ATTAACTGACCCACATGCTGGAGTGAAGGCAGCCCTCTTACAGCTGCTTGCTCAGCATCAGCCCCAGGATGATC  2146

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2147  CCAAAAGAGAAGGTGGTATCGATTATCCCACAGGAGACACATATGTGCCCAGTTCAGACTATAAGGACAACTTT  2220

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2221  GGATCTTCTTTCTCTGCCGCTCCTTACGTTAGCAGTGATGGTCTAGGAAGTAGCTCCGCTGCTGCACCATTGGA  2294

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2295  AGCACGTAGTTTCATTGGAAACTCAGATATTCAGTCTCTGGATAACTACAGTACTGCTTCATCTCACACTGGTG  2368

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2369  GTCCACCTCAAACTTCTGCCTTTACTGAGTCGTTTGCCAGTTCAGTAGCTGGATATGGAGACATTTACCTCAAT  2442

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2443  GCTGGTCCCATGTTGTTTAGTGGAGACAAGGACCATAGATTTGAATATAGCCATGGTCCTATCACAGTCCTCAC  2516

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2517  AAACAGCAATGACCCTTCCACAGGGCCAGAGAGTACTCATCCCTTGCCAGCAAAGATGCACAACTATAACTATG  2590

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2591  GTGGTAACTTACAGGAAAATCCAGGTGGCCCTAGCCTCATGCATGGACAGACCTGGACTTCTCCTGCCCAAGGA  2664

Query  973  --------------------------------------------------------------------------  972
                                                                                      
Sbjct 2665  CCTGGATATTCACAAGGATACAGGGGACACATTAGCACATCAGCTGGCAGAGGTCGAGGCAGAGGGTTACCATA  2738

Query  973  -  972
             
Sbjct 2739  C  2739

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