Nucleotide Global Alignment
Description
- Query:
- TRCN0000470480
- Subject:
- XM_017013978.2
- Aligned Length:
- 1863
- Identities:
- 1364
- Gaps:
- 462
Alignment
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 1 ATGGCGGCGGAGCAGGACCCCGAGGCGCGCGCGGCGGCGCGGCCGCTGCTCACTGACCTCTACCAGGCCACCAT 74
Query 3 GGCGTTGGGCTATTGGCGCGCGGGCCGGGCGCGGGACGCCGCCGAGTTCGAGCTCTTCTTCCGCCGCTGCCCGT 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGCGTTGGGCTATTGGCGCGCGGGCCGGGCGCGGGACGCCGCCGAGTTCGAGCTCTTCTTCCGCCGCTGCCCGT 148
Query 77 TCGGCGGCGCCTTCGCCTTGGCCGCCGGCTTGCGCGACTGTGTGCGCTTCCTGCGCGCCTTCCGCCTGCGGGAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCGGCGGCGCCTTCGCCTTGGCCGCCGGCTTGCGCGACTGTGTGCGCTTCCTGCGCGCCTTCCGCCTGCGGGAC 222
Query 151 GCCGACGTGCAGTTCCTGGCCTCGGTGCTGCCCCCAGACACGGATCCTGCGTTCTTCGAGCACCTTCGGGCCCT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCCGACGTGCAGTTCCTGGCCTCGGTGCTGCCCCCAGACACGGATCCTGCGTTCTTCGAGCACCTTCGGGCCCT 296
Query 225 CGACTGCTCCGAGGTGACGGTGCGAGCCCTGCCCGAGGGCTCCCTCGCCTTCCCCGGAGTGCCGCTCCTGCAGG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGACTGCTCCGAGGTGACGGTGCGAGCCCTGCCCGAGGGCTCCCTCGCCTTCCCCGGAGTGCCGCTCCTGCAGG 370
Query 299 TGTCCGGGCCGCTCCTGGTGGTGCAGCTGCTGGAGACACCGCTGCTCTGCCTGGTCAGCTACGCCAGCCTGGTG 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTCCGGGCCGCTCCTGGTGGTGCAGCTGCTGGAGACACCGCTGCTCTGCCTGGTCAGCTACGCCAGCCTGGTG 444
Query 373 GCCACCAACGCAGCGCGGCTTCGCTTGATCGCAGGGCCAGAGAAGCGGCTGCTAGAGATGGGCCTGAGGCGGGC 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCACCAACGCAGCGCGGCTTCGCTTGATCGCAGGGCCAGAGAAGCGGCTGCTAGAGATGGGCCTGAGGCGGGC 518
Query 447 TCAGGGCCCCGATGGGGGCCTGACAGCCTCCACCTACAGCTACCTGGGCGGCTTCGACAGCAGCAGCAACGTGC 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAGGGCCCCGATGGGGGCCTGACAGCCTCCACCTACAGCTACCTGGGCGGCTTCGACAGCAGCAGCAACGTGC 592
Query 521 TAGCGGGCCAGCTGCGAGGTGTGCCGGTGGCCGGGACCCTGGCCCACTCCTTCGTCACTTCCTTTTCAGGCAGC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TAGCGGGCCAGCTGCGAGGTGTGCCGGTGGCCGGGACCCTGGCCCACTCCTTCGTCACTTCCTTTTCAGGCAGC 666
Query 595 GAGGTGCCCCCTGACCC--------------------------------------------------------- 611
|||||||||||||||||
Sbjct 667 GAGGTGCCCCCTGACCCGGTCAGTCCCTCCTCTAAACCCTGCTGTCTCCAGGCGACAGGCCCCAAGCCAGCCCT 740
Query 612 -------------------------------------------------------------------------- 611
Sbjct 741 TGCCCTGGCGAGAGGTGTGCCACCCAGGCAGGTCACCCCAGTGCTGTCCCAGGAAGCTGGCACGGGCTGCATTA 814
Query 612 -------------------------------------------------------------------------- 611
Sbjct 815 CCTTTGCTCTCAAACTAGGGTGTCCCTGGCTGCTCCCAGGCCTCATCCTGCATTCCTGGCCCCCATTCTTCACC 888
Query 612 --------------GATGTTGGCGCCAGCAGCTGGTGAGGGCCCTGGGGTGGACCTGGCGGCCAAAGCCCAGGT 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACTCTGTTCCACAGATGTTGGCGCCAGCAGCTGGTGAGGGCCCTGGGGTGGACCTGGCGGCCAAAGCCCAGGT 962
Query 672 GTGGCTGGAGCAGGTGTGTGCCCACCTGGGGCTGGGGGTGCAGGAGCCGCATCCAGGCGAGCGGGCAGCCTTTG 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTGGCTGGAGCAGGTGTGTGCCCACCTGGGGCTGGGGGTGCAGGAGCCGCATCCAGGCGAGCGGGCAGCCTTTG 1036
Query 746 TGGCCTATGCCTTGGCTTTTCCCCGGGCCTTCCAGGGCCTCCTGGACACCTACAGCGTGTGGAGGAGTGGTCTC 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGCCTATGCCTTGGCTTTTCCCCGGGCCTTCCAGGGCCTCCTGGACACCTACAGCGTGTGGAGGAGTGGTCTC 1110
Query 820 CCCAACTTCCTAGCAGTCGCCTTGGCCCTGGGAGAGCTGGGCTACCGGGCAGTGGGCGTGAGGCTGGACAGTGG 893
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCCAACTTCCTAGCAGTCGCCCTGGCCCTGGGAGAGCTGGGCTACCGGGCAGTGGGCGTGAGGCTGGACAGTGG 1184
Query 894 TGACCTGCTACAGCAGGCTCAGGAGATCCGCAAGGTCTTCCGAGCTGCTGCAGCCCAGTTCCAGGTGCCCTGGC 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGACCTGCTACAGCAGGCTCAGGAGATCCGCAAGGTCTTCCGAGCTGCTGCAGCCCAGTTCCAGGTGCCCTGGC 1258
Query 968 TGGAGTCAGTCCTCATCGTAGTCAGCAACAACATTGACGAGGAGGCGCTGGCCCGACTGGCCCAGGAGGGCAGT 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGAGTCAGTCCTCATCGTAGTCAGCAACAACATTGACGAGGAGGCGCTGGCCCGACTGGCCCAGGAGGGCAGT 1332
Query 1042 GAGGTGAATGTCATTGGCATTGGCACCAGTGTGGTCACCTGCCCCCAACAGCCTTCCCTGGGTGGCGTCTATAA 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAGGTGAATGTCATTGGCATTGGCACCAGTGTGGTCACCTGCCCCCAACAGCCTTCCCTGGGTGGCGTCTATAA 1406
Query 1116 GCTGGTGGCCGTGGGGGGCCAGCCACGAATGAAGCTGACCGAGGACCCCGAGAAGCAGACGTTGCCTGGGAGCA 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCTGGTGGCCGTGGGGGGCCAGCCACGAATGAAGCTGACCGAGGACCCCGAGAAGCAGACGTTGCCTGGGAGCA 1480
Query 1190 AGGCTGCTTTCCGGCTCCTGGGCTCTGACGGGTCTCCACTCATGGACATGCTGCAGTTAGCAGAAGAGCCAGTG 1263
||||||||||||||||||||||||||||||| ||| |||| ||.
Sbjct 1481 AGGCTGCTTTCCGGCTCCTGGGCTCTGACGG-----------TGG---TGCT-------------------GTC 1521
Query 1264 CCACAGGCTGGGCAGGAGCTG------AGGGTGTG-GCCTCCAGGGGCCCAGGAGCCCTGCACCGTGAGGCCAG 1330
|.|.||||| |||||..||| ||..|||| || ||||| ||.|| ||.||||
Sbjct 1522 CGAGAGGCT--GCAGGCCCTGGTGAACAGTCTGTGTGC-----GGGGC-----AGTCC----CCCTGAG----- 1574
Query 1331 CCCAGGTGGAGCCACTACTGCGGCTCTGCCTCCAGCAGGGACAGCTG--TGTGAGCCGCTCCCATCCCTGGCAG 1402
||| ||| |||.|| |||| ||..|.|..|.|..|||.|| ||
Sbjct 1575 -------------ACT----CGG----------AGCGGG----GCTGACTGGAAACAACACGAATCACT--CA- 1614
Query 1403 AGTCTAGAGCCTTGGCC---CAGC-TGTCC--------CTGAGCCG-------ACTCAGCCCTGAGCACAGGCG 1457
|||..|| |||| ||||| .||.|.|| ||.||||| ||| .|
Sbjct 1615 ----------CTTTTCCCCACAGCTTGTCCTGTGTTGTTTGTGTCGTTTGTTCACCCAGCC-----CAC---GG 1670
Query 1458 GCTGCGGAGCCCTGCACAGTACCAGG--TGGTGCTGTCCGAGAGGCTGCAGGCCCTGGTGAACAGTCTGTGTGC 1529
|||||| ||| ||.|| ||..|||| |||||.|| |.|.||| ||||.|..|
Sbjct 1671 GCTGCG----CCT--------CCCGGGCTGCGGCTG-------GGCTGGAG----TCGGGAA---TCTGAGCTC 1718
Query 1530 GGGGCAGTCCCCC 1542
|.||
Sbjct 1719 GAGG--------- 1722
