Nucleotide Global Alignment
Description
- Query:
- TRCN0000470498
- Subject:
- XR_001781786.1
- Aligned Length:
- 4184
- Identities:
- 830
- Gaps:
- 3220
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAGCTCCCTTCCCTCGGGCCTCACCCCTTCCCGTCCCCTCCCACCTCCACCTCCGCCCCTCTTTCCAGGCCTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCATTCCAGGTGCACCTTCCCGGGGGAACCCGGAGGAAAGGAAGGAGAAAGGGAGGCAAGGAGGGAGCCGGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCGGGCATCCTCCCAGATGCGTCTGAGCCGCCTGAAAGTGTGAAGCAGAGGCTGCCCCTGTCCGGTCTGGCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGAGCCCGAATTAGCTTTTGTCAGTAGCCCCCTACCCCAGTTCAAGAGTCCCCACATCTCCAGCCCCTCCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACAACGCTGCAGCCGCGGGAGAGCCCGTCCCTTCCACGTGCCAGCAGACCCGCCCCCGCCCGGCCCCCGCACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCAGGGCGCTGGGTTAATCCCGGGCCTCCGTGGCGAAGGGGTGCGAGATCGTGTTTCAAGCGCCCCCTGCCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCTCCGGACACCAGGAGGCGGCCCCAATGCAGACCCCGGCCGGGCAGGGACGCCCCTGCAGATGGGCCGGGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAGCAGCAAAGCAGGGCACCGCCCTCGGCCCGCCCGCCGAGGAGGAGACGCTAGCGGGAGGCTGAGCCTGCGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCGCGCCCGGGGACCCGTCGCACTCTGCACTCGGCCGCCTGGGCTGAGGGGACGGGACGGGTGCGGGCGCGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCAGCGGGCCGGGAGCTGAGTCAAGGCCGAGAAGCAGAGGGAGGCAAGAGGACAGTGCACCGAGATGGCGGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAACGGCTGCGGCGGCCGCGGCGGCGGCGGCGGGGGAAGGGATGGAGCCTCGAGCGCTGCAGTACGAGCAGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTGATGTATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCGTATTCGCCTGGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCCTGAGCCCTGGAAGGGGTCCCCTTCTGCCCGGGCTACCCCAGAGCTCCTAGAATATGGACAGAGCCGATGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACTGGATCTTCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGTTCTGTTGGGGCTCCTCATGGCACTGGTCAGCTGGGCTATGGACTATGCCATCGCTGTCTGTCTACAGGGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGGCAAAGGCTGGCGAGCTCAGCAATGGATGTCCCGGGGCTTAAACACCAACATCTTACTCCAGTACCTGGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGGTTACCTACCCCGTGGTCCTCATCACTTTCTCTGCTGGATTCACCCAGATCCTGGCCCCACAGGCTGTCGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTCTGGCATCCCCGAAATGAAAACCATCCTTCGGGGAGTGGTGCTGAAAGAATACCTCACCCTCAAGACCTTTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAGCTAAGGTCATTGGGCTAACCTGTGCCCTGGGCAGTGGGATGCCCCTTGGCAAAGAGGGACCCTTTGTGCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTGCCAGCATGTGTGCCGCCCTTCTCAGCAAGTTCCTCTCCCTCTTTGGGGGTATCTATGAGCATGAGTCCCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAACACGGAGATGCTAGCTGCTGCATGCGCAGTAGGAGTGGGCTGCTGCTTTGCCGCACCAATCGGAGGGGTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATTCAGCATTGAAGTCACCTCCACCTTCTTCGCTGTTAGGAACTACTGGCGGGGCTTCTTTGCGGCCACCTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGTGCCTTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGATGAAGAAACCATCACAGCTCTCTTCAAAACTCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTAGTGGCTTCG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGGGAGCCCTCTTTGTCTACCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCAAAAAACCATCAACCGCTTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTCATGAGGAAACGGCTGCTCTTCCCGGCACTGGTGACTCTGCTCATCTCCACTCTGACCTTCCCCCCTGGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGACAGTTCATGGCCGGACAGCTCTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGACGTGGGTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCAGGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGAGCCCACCACGTGCCAATGTCTTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTACTCTGGTCATCTTCATCCTCATGAAGTTCTGGATGTCTGCACTGGCTACCACTATCCCAGTGCCCTGTGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGCCTTCATGCCTGTCTTTGTCATTGTGTTCCCCTACTACCTCTTTCTCTTCCTAAAACCCTCCCTGAAGGAGC 2220
Query 1 ----------------------------ATGGCTGCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCT 46
|||||.|||||||||||||||||.|||||.||.||.||||||||||
Sbjct 2221 GGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAGATGGGATTCACACAGATAGCAGCACCT 2294
Query 47 ACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACACACAGTGTCC 120
||||.|||||.|||||.|||||.||||||||||||||.|||||.||.||||||||.||||||||||||||||||
Sbjct 2295 ACCGAATTGTACCTGGAGGCTATGCTGTGGTCGGGGCGGCTGCACTCGCAGGAGCAGTGACACACACAGTGTCC 2368
Query 121 ACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCTGCCTGTCATGATCGTCGTCATCCTGGC 194
||.||.|||||.||.|||||||||||.||||||||.||.|||||.||||||||||||||.|..|||||||||||
Sbjct 2369 ACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCATGATTGCTGTCATCCTGGC 2442
Query 195 CAACGCTGTCGCCCAGAGTCTGCAGCCCTCCCTCTATGACAGCATCATCCGAATCAAGAAACTGCCCTACCTGC 268
.||.|||||.||||||||.||||||||.||.|||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 2443 TAATGCTGTTGCCCAGAGCCTGCAGCCATCGCTCTATGACAGTATCATCCGCATCAAGAAGCTGCCCTACCTAC 2516
Query 269 CTGAGCTCGGCTGGGGCCGCCACCA------------------------------------------------- 293
|||||||.|||||||||||||||||
Sbjct 2517 CTGAGCTGGGCTGGGGCCGCCACCAGTATGAAGGGCCCAGTGCAAAGAGGGTGGGAGTGAGGGGTAGGCCTCCC 2590
Query 294 -------------------------------------------------------------------------- 293
Sbjct 2591 TGGACCCTTCAGCCCCACCTCCAGCAAGGTCTCTTACCAGTGAGGCTGAGACGCTAGCTGTTTTGCTCTGCATT 2664
Query 294 -------------------------------------------------------------------------- 293
Sbjct 2665 AGAGCTGCCCTCACCCTGGGGGGGGGGGGGTCCTGTAGTTGGCCTCTACTGACCCAACCCAGGAGGAAGTTAGA 2738
Query 294 -------------------------------------------------------------------------- 293
Sbjct 2739 GAATGCTAACTGCCCAGGGCCCTCCACTCCTGTCCCCTCTGGTTCTGCACCCTTCCTCATGACACTGGGGTGGT 2812
Query 294 ---------------------------------------------------------------GCAGTACCGGG 304
|||||||||||
Sbjct 2813 GGTGGTAATTCTGGGCCAGTCTTCCATGCTGAGCACACCCTGAGTGCACAGTTCTCCCTCCAGGCAGTACCGGG 2886
Query 305 TGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTG 378
||||.||.||||||||||||||.||||||||.||||||||.||||||||||||||.||.|||||||||||.|||
Sbjct 2887 TGCGAGTCGAGGACATCATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTG 2960
Query 379 GCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCAT 452
|||||||||||.|||||||||||.|||.||||||||||||||||.||||||||||||||.||.|||||.|||||
Sbjct 2961 GCACTGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCAT 3034
Query 453 CGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGC 526
|||.||.|||||||||||.|||.|..|.||.|||||||||||||||||.|||.||||||||||||||||..|||
Sbjct 3035 CGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGC 3108
Query 527 GCAGAGCCACCCAGACCTCTCCACTATCTGATCAGGAGGGTCCCCCTACCCCTGAGGCTTCTGTCTGCTTCCAG 600
..|||....|||||...|||||||..||.|||||||||.|.|||||||.|.|.|||.|.|||.||.||||||||
Sbjct 3109 TAAGAAAAGCCCAGCTGTCTCCACCGTCGGATCAGGAGAGCCCCCCTAGCTCCGAGACATCTATCCGCTTCCAG 3182
Query 601 GTGAACACAGAAGACTCAGCCTTCCCAGCAGCCCGGGGGGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAG 674
|||||||||||.|||||.|.||||.|.|.|||||..|||.||||.|||||||||||.||||||||.||.|||||
Sbjct 3183 GTGAACACAGAGGACTCGGGCTTCTCTGGAGCCCACGGGCAGACTCACAAGCCCCTGAAGCCTGCTCTAAAGAG 3256
Query 675 GGGGCCCAGTGTCACCAG---GAACCTCGGAGAGA--GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCT 743
.|||||||| ||.||| .|.||| |.|| || ||.|||||||.|.|...|||||.||||||||.|||||
Sbjct 3257 AGGGCCCAG---CAACAGTACAAGCCT-GCAG-GAAGGTACCACAGGCAACATGGAGTCAGCAGGCATTGCCCT 3325
Query 744 CCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGG--------------------------------------- 778
|.|.|||||||||||||||||||||||.|..||||
Sbjct 3326 CAGAAGCCTCTTCTGTGGCAGTCCACCTCTGGAGGCAACATCAGAAGTGAGTAGCCCGGATGCTGCCCTCTCCT 3399
Query 779 ------------------------------------------------------------CTGCTTC------- 785
|||||||
Sbjct 3400 GCCTGCCCAGCTCCCCTTCTGATTCTCCCAGTTAACCCTACGATGACTCTTCCACTCGACCTGCTTCCTGCTCT 3473
Query 786 -------------------------------------------------------------------------- 785
Sbjct 3474 GCTGTCAGCTCTGCCCCTGCAGCATGCCCTTCCTCCTGGGCTCCATCCCATCCTTCACATCCCCTCTCCCTATA 3547
Query 786 ------------------------------------GGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGC 823
|||.||||..|||||||||||.||||||||||||||||
Sbjct 3548 ACCTCAACTCCTCTCTGCTTTGGCTCTGACCAAGTTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGC 3621
Query 824 GTGTCCGAATCTCCCTGGC------------------------------------------------------- 842
|.|||||||||||||||||
Sbjct 3622 GGGTCCGAATCTCCCTGGCGGTACGTGTGCCCCTCCCCCTGCAGCCCAGGAGCACCAGGCGGGGAGGGCTGGGC 3695
Query 843 ------------------------------------------------------------AAGTGACGCGGACC 856
.||||||.|.||||
Sbjct 3696 TTCTAGGTGGGACAGACCTCCCAGAGCCAGGGGTACATCCACCTTCCTGTCTCCCTCCTAGAGTGACTCAGACC 3769
Query 857 TGGAAGGCGAGATGAGCCCTGAAG-------------------------------------------------- 880
.|||||.|||||||||.|||||.|
Sbjct 3770 CGGAAGCCGAGATGAGTCCTGAGGAGATCTTAGAGTGGGAAGAACAGCAGCTAGATGAGCCAGTCAACTTCAGT 3843
Query 881 -------------------------------------------------------AGACTCACACTATCTTCTC 899
||||.|||||.||||||||
Sbjct 3844 GACTGCAAAATCGACCCTGCCCCCTTCCAGCTGGTGGAGCGGACTTCTTTGCACAAGACCCACACCATCTTCTC 3917
Query 900 ACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCC 973
|.|||||||||||||||||||||||||||||||.|||||||||||||||||.||.||.||.|||||||||
Sbjct 3918 ATTGCTGGGAGTGGACCATGCTTATGTCACCAGCATTGGCAGACTCATTGGGATTGTCACCCTAAAGGAG---- 3987
Query 974 GGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGT 1047
Sbjct 3988 -------------------------------------------------------------------------- 3987
Query 1048 GCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATGGCCTCCC 1121
Sbjct 3988 -------------------------------------------------------------------------- 3987
Query 1122 CCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAA 1161
Sbjct 3988 ---------------------------------------- 3987
