Nucleotide Global Alignment

Description

Query:
TRCN0000470510
Subject:
NM_001166038.2
Aligned Length:
1246
Identities:
746
Gaps:
380

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATAGGCATGTTGGAAAGTCTTCAGCATGAATCAGATCTCCTTCAGCATGATCAAATTCATACTGGAGAGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCTTATGAATGTAATGAATGTAGAAAAACTTTTAGCCTGAAGCAAAACCTTGTAGAGCATAAGAAAATGCATA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGGAGAGAAATCTCATGAATGCACTGAATGTGGTAAAGTGTGCTCTCGAGTCTCATCTCTTACTCTACACCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAAGTCACACAGGAAAGAAGGCATATAAATGTAATAAATGTGGAAAAGCCTTCAGCCAGAAGGAAAACTTCCT  296

Query    1  -------------------------------------------------------------ATGTCACACC---  10
                                                                         |||.|| |||   
Sbjct  297  TTCTCATCAGAAACATCACACTGGAGAGAAACCTTATGAATGTGAAAAAGTTTCTATTCAGATGCCA-ACCATC  369

Query   11  -TCAGCCAGCAGAAAATT--TACAGTGGGGAA--AACCCCTTTGCCTGTAAGGTATGTGGAAAAGTCTTCAGCC  79
             ||||.||.|||||||.|  ||||    ||||  ||.||||.|||.|||||||.||||||.||||.|||.|.|.
Sbjct  370  ATCAGACACCAGAAAAATCATACA----GGAACCAAACCCTATGCATGTAAGGAATGTGGCAAAGCCTTTAACG  439

Query   80  ACAAATCAAACCTCACTGAGCATGAGCATTTTCACACGAGAGAGAAACCTTTTGAATGTAACGAGTGTGGAAAA  153
            .||||.||.|.|||||||||||||||.|..||||.||..||||.|||||.|||||||||||..|||||||||.|
Sbjct  440  GCAAAGCATATCTCACTGAGCATGAGAAAATTCATACTGGAGAAAAACCATTTGAATGTAATCAGTGTGGAAGA  513

Query  154  GCCTTTAGCCAAAAGCAGTATGTCATTAAACATCAGAACACCCATACTGGCGAGAAGCTTTTCGAATGTAATGA  227
            |||||.|||||.|||||.||..||||||||||||||||||.|||||||||..||||||..||..||||||.|||
Sbjct  514  GCCTTCAGCCAGAAGCAATACCTCATTAAACATCAGAACATCCATACTGGAAAGAAGCCCTTTAAATGTAGTGA  587

Query  228  ATGTGGAAAATCATTTAGCCAGAAGGAAAACCTCCTTACGCACCAGAAAATTCACACTGGAGAAAAACCTTTTG  301
            .|||||||||.|.|||||||||||||||||||||.|||..||.||||.|||.||.||||||||.|||||||.||
Sbjct  588  GTGTGGAAAAGCTTTTAGCCAGAAGGAAAACCTCATTATACATCAGAGAATCCATACTGGAGAGAAACCTTATG  661

Query  302  AGTGTAAAGATTGCGGGAAAGCTTTCATTCAGAAGTCAAACCTCATCAGACACCAGAGAACTCACACAGGAGAG  375
            |.|||||||..||.|||||||||||||||||||||||||.||||||.|||||||||||||.|||||||||||||
Sbjct  662  AATGTAAAGGGTGTGGGAAAGCTTTCATTCAGAAGTCAAGCCTCATTAGACACCAGAGAAGTCACACAGGAGAG  735

Query  376  AAGCCCTTTGTA--TGTAAGGAGTGTGGAAAAACCTTCAGTGGCAAATCCAACCTTACTGAGCATGAGAAAATC  447
            ||.||  ||.||  ||||||||.|||||.|||.|||||||||||||.||.||.||.||.||||||||||||||.
Sbjct  736  AAACC--TTATACGTGTAAGGAATGTGGGAAAGCCTTCAGTGGCAAGTCAAATCTCACAGAGCATGAGAAAATT  807

Query  448  CATATTGGAGAGAAGCCTTTTAAATGTAGTGAATGTGGAACAGCCTTTGGCCAGAAGAAGTACCTCATAAAACA  521
            ||||||||||||||.||.|..|||||||.|||||||||||||..|||..|.||||||.|.||||||||.|||||
Sbjct  808  CATATTGGAGAGAAACCCTACAAATGTAATGAATGTGGAACAATCTTCAGGCAGAAGCAATACCTCATTAAACA  881

Query  522  TCAGAACATTCACACTGGAGAGAAACCCTATGAATGTAACGAATGTGGAAAAGCCTTCTCTCAGCGA---ACAT  592
            |||.||.|||||.||.|||||||||||||||||||||||..||||||||||||||||||||   |||   ||||
Sbjct  882  TCACAATATTCATACAGGAGAGAAACCCTATGAATGTAATAAATGTGGAAAAGCCTTCTCT---CGAATCACAT  952

Query  593  CACTTATTGTACATGTGAGGATTCATTCAGGTGATAAACCTTACGAATGCAATGTTTGTGGAAAAGCCTTCTCT  666
            |||||||||||||||||||.||||||.||||||||||.|||||.||.||.||.||.|||||.||||||||||.|
Sbjct  953  CACTTATTGTACATGTGAGAATTCATACAGGTGATAAGCCTTATGAGTGTAAGGTCTGTGGGAAAGCCTTCTGT  1026

Query  667  CAGAGCTCATCTCTCACTGTGCATGTGAGAAGCCATACAGGGGAGAAGCCCTATGGTTGTAATGAATGTGGGAA  740
            ||.|||||||||||.|||||||||.||||||||||||||||.|||||.||||||||||||||||||||||||||
Sbjct 1027  CAAAGCTCATCTCTTACTGTGCATATGAGAAGCCATACAGGTGAGAAACCCTATGGTTGTAATGAATGTGGGAA  1100

Query  741  AGCTTTCTCTCAGTTCTCAACCCTTGCTCTGCATTTGAGAATACACACAGGTAAGAAGCCTTATCAGTGCAGTG  814
            |||.||.||||||||||||||||||||||||||..|||||||.||.||.|||.|.||.|||||||||||.||||
Sbjct 1101  AGCCTTTTCTCAGTTCTCAACCCTTGCTCTGCACATGAGAATCCATACTGGTGAAAAACCTTATCAGTGTAGTG  1174

Query  815  AATGTGGGAAAGCTTTCAGCCAGAAGTCACACCACATTAGACACCAGAAAATTCATACTCAC  876
            ||||||||||||||||||||||.||||||||.||||||||||||||||.||||||||||||.
Sbjct 1175  AATGTGGGAAAGCTTTCAGCCAAAAGTCACATCACATTAGACACCAGAGAATTCATACTCAT  1236

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.