Nucleotide Global Alignment

Description

Query:
TRCN0000470560
Subject:
NR_136182.2
Aligned Length:
4017
Identities:
787
Gaps:
3224

Alignment

Query    1  ---ATGG---AGCAGGC--GAACCCTTT---------------ACGTCCAGATGGCG-----------------  34
               ||.|   ||||.||  |.|||..||               ||||  .|||||||                 
Sbjct    1  AGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTTTTGAAGACGT--GGATGGCGGGAATTCTCGCTTCTGG  72

Query   35  ------------AGTCCAAAGG----AGGTGTTTTAGCTCACTTGGAAAGGCTAGAGACCCAAGTGAGCAGATC  92
                        ||    ||||    ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   73  CCTGGGTGAGCTAG----AAGGGAGAAGGTGTTTTAGCTCACTTGGAAAGGCTAGAGACCCAAGTGAGCAGATC  142

Query   93  CCGTAAACAGTCTGAAGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAA  166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  143  CCGTAAACAGTCTGAAGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAA  216

Query  167  GGCGTCTGCGAGATGAGCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  217  GGCGTCTGCGAGATGAGCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTA  290

Query  241  GAACCCAACCAAACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGAGAAATTGGAAAATGTGAAAGCCATTCT  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  291  GAACCCAACCAAACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGAGAAATTGGAAAATGTGAAAGCCATTCT  364

Query  315  GCAGGCATATCATTTTACAGGCCTCAGTGGTAAACTGACCAGCCGAGGAGTTTGTGTCTGCATCAGTACTGCTT  388
            |||||||||||||||                                                           
Sbjct  365  GCAGGCATATCATTT-----------------------------------------------------------  379

Query  389  TTGAGGGGAACCTATTGGATTCCTATTTTGTGGACCTTGTCATACAGAAACCACTCCGGATACATCACCATTCA  462
                                                      ||||||||||||||||||||||||||||||||
Sbjct  380  ------------------------------------------TACAGAAACCACTCCGGATACATCACCATTCA  411

Query  463  GTCCCAGTCTTCATTCCCCTGGAAGAGATAGCTGCAAAATATTTACAGACCAACATCCAGCACTTCCTGTTCAG  536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  412  GTCCCAGTCTTCATTCCCCTGGAAGAGATAGCTGCAAAATATTTACAGACCAACATCCAGCACTTCCTGTTCAG  485

Query  537  TCTCTGCGAGTACCTGAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGTGACTTTGCAGCCC  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  486  TCTCTGCGAGTACCTGAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGTGACTTTGCAGCCC  559

Query  611  TCCTGACTGGGCCCTTGCAGAGAAACCCACTGTGTAACTTGCTGTCATTTACTTACAAACTGGATCCAGGGGGT  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  560  TCCTGACTGGGCCCTTGCAGAGAAACCCACTGTGTAACTTGCTGTCATTTACTTACAAACTGGATCCAGGGGGT  633

Query  685  CAGTCCTTCCCGTTCTGTGCTAGATTGCTGTATAAGGACCTCACAGCAACTCTTCCCACTGACGTCACCGTGAC  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  634  CAGTCCTTCCCGTTCTGTGCTAGATTGCTGTATAAGGACCTCACAGCAACTCTTCCCACTGACGTCACCGTGAC  707

Query  759  ATGTCAAGGAGTGGAAGTATTATCCACTTCATGGGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTGTACGA  832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  708  ATGTCAAGGAGTGGAAGTATTATCCACTTCATGGGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTGTACGA  781

Query  833  AGCCCTTGCATCAAGTGTTTGCCTCATTTACAAGAAAAGGAGAAAAGTTGGATATGAGTCTGGTCTCC------  900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct  782  AGCCCTTGCATCAAGTGTTTGCCTCATTTACAAGAAAAGGAGAAAAGTTGGATATGAGTCTGGTCTCCTAATAG  855

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct  856  ATTGTTTTCACTGCACTGGGAGCACATCAGAGAAATAAATCCCCCCTCCCCTGCCAGGTGAAAGGAAATATTGC  929

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct  930  ACTTTCTGTTCTCATGACTAAGGGGACAGGAGTTCCAGAAGAACCTTTCAAGATGATCAGGAACACCAGGACGA  1003

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1004  GGGCCGTCTCACCTCACTCGGACCACATGGAGACCTCCCTTCAAAATGGGAGCCATGTCCTGCCCCACCAAGCC  1077

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1078  CTGTCTGAAGTGGAGCTTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCTTTGT  1151

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1152  CCCAGCTCTGCCACCCTCCTGCTCACAGTGGTCAGGGCCCCTCAGGGGCAAGGACGGCAGGGATTGGAACGAGG  1225

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1226  GCTCTGGAAGGACTGTTCAGCCCTATGCCTAAGACCCCTATGCTGGGGACACTACAGGCACACACAGGAATAGC  1299

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1300  AGGGCCACCCTCAGAGCTCACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGAG  1373

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1374  TGTGCACTTCAATCCAGGAAGGTCGGGACTTCCTTCAGTTTCAAAAAATAAATTCTCCCTTCCGGTTTGGACTG  1447

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1448  TTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGCCATTGGGGAAGG  1521

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1522  TGGCTAGCTTATCCCGCCCCTTCAAGAAGAAGGTCAGCAGCTCCCCCTTCCCCTTCACAAAGATGGGGCCTCGC  1595

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1596  CTCACAAAGCGGAAGCCGTACTCTCGGAGGATGACTTGGGTTTCTTCTACCACCTGGAGAGGGAGGGGGAGCAA  1669

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1670  GAACGTGGCGTTACGGGGGGAGCCTAGACTGAGGGCGGGTGGGGGCTTTGGGTGGTTGGAGCCGAGCACTGATC  1743

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1744  CATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGG  1817

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1818  GTGGGAAGGAGAACCCTGGAGTGACTGGCTGGGGGCCTCCTCTCATCCAGAGACTTCTCTCCTAGGATGGCCAT  1891

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1892  GGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTGTCCCTTTGCCCCTTTCGTGG  1965

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 1966  AGCTTTTCTGCCAGACGCCACTGAGACAGATCACAAGGTATTAGAAGGTTCATACCCAAAGGTAGGCCATATGC  2039

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2040  ATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTGTGCTGAGGCTAGCTATTGCAGAG  2113

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2114  ATTCTTTTCCACTTGCCCCACGTCTCTGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAGGCAGGGGCACGT  2187

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2188  GGGAAAGCACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGA  2261

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2262  ATGTTGCCCATGACCCCCGTGGACTCCATCCTGCTGGCTACATTGACTGTATTGCCCCAGATGTCGTAGTGTGG  2335

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2336  TTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCTAGGGTAGAGGCATAAAGTTCAGCAC  2409

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2410  AGCCACAGGCCACACCTTGTTATGGGCCTCAGAAGCCATCTCCTCTCCAGACCTGTACCACAAAGCTCCTAATG  2483

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2484  TAACACATCATTGTCCTCATTCAACTTGGCTGTATGCTATTGGAGGGTGGAAATCACATCTCCTGTTTATCCGT  2557

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2558  GTGCTTGTTAGGTGTCAGCCGCCACCCCCCCCCCATATGCAGATTTACTCGGCATGGTAGTGGCCAGCTTCTAA  2631

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2632  CACAGCTGGTATTTCAAGTCTCCTGGGACCTCACTCAGGAATGATACCCCCTCAGTAGAAGCAGCAGGTGATCT  2705

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2706  TAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGGA  2779

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2780  TCACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACAGTAGGCACAGTATAGTCGGATCATCAC  2853

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2854  ATCAGCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGGACTAAAGGTCTTTCAGGTCTCCTTGCCCTGTGAG  2927

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 2928  TGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGGTGGGCCAGGCCCC  3001

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3002  TGCATGGGAAGGGAGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA  3075

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3076  GGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCC  3149

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3150  AGCGCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA  3223

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3224  GCCTGCTCTGCTGCCTTCCCTGGCAGTGTTCTGGGGGTGGATTCCCTACACCTAGATGTTCAAGGCCTTACTTT  3297

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3298  TCCTCCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGG  3371

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3372  CAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTG  3445

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3446  GGCCTGGTCCTGGTCCTTAGGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGAG  3519

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3520  GGGGATGACCCGCCTTGGACGTGTTTCTTTAACCTCATCCATATAATAGGGCCGTGGGATGGTTGTAGAGGTAA  3593

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3594  AGCAGGATGATGGTGTTTTAAGACCAGAGCTTGGGACCAGGGCTCCTACACCTAATTTTCTCTCCTGGTAGCTG  3667

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3668  AACAAAGGTCTAAATTAGCTTAACAAAAGAACAGGCTGCCGTCAGCCAGAGTTCTGAAGGCCATGCTTTCAGTT  3741

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3742  TCCCTTGTTGACAATTGCTCTCCAGTTCCTATGAAAGCACAGAGCCTTAGGGGGCCTGGCCACAGAACACAACC  3815

Query  901  --------------------------------------------------------------------------  900
                                                                                      
Sbjct 3816  ATCTTAGGCCTGAGCTGTGAACAGCAGGGGGTTGTGTGTCTGTTCTGTTTCTCTGCTTGCCGAACTTTCTCAAT  3889

Query  901  ---------------------  900
                                 
Sbjct 3890  AAACCCTATTTCTTATTTATA  3910