Nucleotide Global Alignment
Description
- Query:
- TRCN0000470560
- Subject:
- NR_136183.2
- Aligned Length:
- 4017
- Identities:
- 888
- Gaps:
- 3123
Alignment
Query 1 ---ATGG---AGCAGGC--GAACCCTTT---------------ACGTCCAGATGGCG----------------- 34
||.| ||||.|| |.|||..|| |||| .|||||||
Sbjct 1 AGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTTTTGAAGACGT--GGATGGCGGGAATTCTCGCTTCTGG 72
Query 35 ------------AGTCCAAAGG----AGGTGTTTTAGCTCACTTGGAAAGGCTAGAGACCCAAGTGAGCAGATC 92
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 CCTGGGTGAGCTAG----AAGGGAGAAGGTGTTTTAGCTCACTTGGAAAGGCTAGAGACCCAAGTGAGCAGATC 142
Query 93 CCGTAAACAGTCTGAAGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAA 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143 CCGTAAACAGTCTGAAGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAA 216
Query 167 GGCGTCTGCGAGATGAGCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217 GGCGTCTGCGAGATGAGCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTA 290
Query 241 GAACCCAACCAAACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGAGAAATTGGAAAATGTGAAAGCCATTCT 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 GAACCCAACCAAACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGAGAAATTGGAAAATGTGAAAGCCATTCT 364
Query 315 GCAGGCATATCATTTTACAGGCCTCAGTGGTAAACTGACCAGCCGAGGAGTTTGTGTCTGCATCAGTACTGCTT 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 GCAGGCATATCATTTTACAGGCCTCAGTGGTAAACTGACCAGCCGAGGAGTTTGTGTCTGCATCAGTACTGCTT 438
Query 389 TTGAGGGGAACCTATTGGATTCCTATTTTGTGGACCTTGTCATACAGAAACCACTCCGGATACATCACCATTCA 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TTGAGGGGAACCTATTGGATTCCTATTTTGTGGACCTTGTCATACAGAAACCACTCCGGATACATCACCATTCA 512
Query 463 GTCCCAGTCTTCATTCCCCTGGAAGAGATAGCTGCAAAATATTTACAGACCAACATCCAGCACTTCCTGTTCAG 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 GTCCCAGTCTTCATTCCCCTGGAAGAGATAGCTGCAAAATATTTACAGACCAACATCCAGCACTTCCTGTTCAG 586
Query 537 TCTCTGCGAGTACCTGAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGTGACTTTGCAGCCC 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TCTCTGCGAGTACCTGAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGTGACTTTGCAGCCC 660
Query 611 TCCTGACTGGGCCCTTGCAGAGAAACCCACTGTGTAACTTGCTGTCATTTACTTACAAACTGGATCCAGGGGGT 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TCCTGACTGGGCCCTTGCAGAGAAACCCACTGTGTAACTTGCTGTCATTTACTTACAAACTGGATCCAGGGGGT 734
Query 685 CAGTCCTTCCCGTTCTGTGCTAGATTGCTGTATAAGGACCTCACAGCAACTCTTCCCACTGACGTCACCGTGAC 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 CAGTCCTTCCCGTTCTGTGCTAGATTGCTGTATAAGGACCTCACAGCAACTCTTCCCACTGACGTCACCGTGAC 808
Query 759 ATGTCAAGGAGTGGAAGTATTATCCACTTCATGGGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTGTACGA 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 ATGTCAAGGAGTGGAAGTATTATCCACTTCATGGGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTGTACGA 882
Query 833 AGCCCTTGCATCAAGTGTTTGCCTCATTTACAAGAAAAGGAGAAAAGTTGGATATGAGTCTGGTCTCC------ 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 AGCCCTTGCATCAAGTGTTTGCCTCATTTACAAGAAAAGGAGAAAAGTTGGATATGAGTCTGGTCTCCTAATAG 956
Query 901 -------------------------------------------------------------------------- 900
Sbjct 957 ATTGTTTTCACTGCACTGGGAGCACATCAGAGAAATAAATCCCCCCTCCCCTGCCAGGTGAAAGGAAATATTGC 1030
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1031 ACTTTCTGTTCTCATGACTAAGGGGACAGGAGTTCCAGAAGAACCTTTCAAGATGATCAGGAACACCAGGACGA 1104
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1105 GGGCCGTCTCACCTCACTCGGACCACATGGAGACCTCCCTTCAAAATGGGAGCCATGTCCTGCCCCACCAAGCC 1178
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1179 CTGTCTGAAGTGGAGCTTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCTTTGT 1252
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1253 CCCAGCTCTGCCACCCTCCTGCTCACAGTGGTCAGGGCCCCTCAGGGGCAAGGACGGCAGGGATTGGAACGAGG 1326
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1327 GCTCTGGAAGGACTGTTCAGCCCTATGCCTAAGACCCCTATGCTGGGGACACTACAGGCACACACAGGAATAGC 1400
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1401 AGGGCCACCCTCAGAGCTCACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGAG 1474
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1475 TGTGCACTTCAATCCAGGAAGGTCGGGACTTCCTTCAGTTTCAAAAAATAAATTCTCCCTTCCGGTTTGGACTG 1548
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1549 TTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGCCATTGGGGAAGG 1622
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1623 TGGCTAGCTTATCCCGCCCCTTCAAGAAGAAGGTCAGCAGCTCCCCCTTCCCCTTCACAAAGATGGGGCCTCGC 1696
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1697 CTCACAAAGCGGAAGCCGTACTCTCGGAGGATGACTTGGGTTTCTTCTACCACCTGGAGAGGGAGGGGGAGCAA 1770
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1771 GAACGTGGCGTTACGGGGGGAGCCTAGACTGAGGGCGGGTGGGGGCTTTGGGTGGTTGGAGCCGAGCACTGATC 1844
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1845 CATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGG 1918
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1919 GTGGGAAGGAGAACCCTGGAGTGACTGGCTGGGGGCCTCCTCTCATCCAGAGACTTCTCTCCTAGGATGGCCAT 1992
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1993 GGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTGTCCCTTTGCCCCTTTCGTGG 2066
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2067 AGCTTTTCTGCCAGACGCCACTGAGACAGATCACAAGGTATTAGAAGGTTCATACCCAAAGGTAGGCCATATGC 2140
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2141 ATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTGTGCTGAGGCTAGCTATTGCAGAG 2214
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2215 ATTCTTTTCCACTTGCCCCACGTCTCTGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAGGCAGGGGCACGT 2288
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2289 GGGAAAGCACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGA 2362
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2363 ATGTTGCCCATGACCCCCGTGGACTCCATCCTGCTGGCTACATTGACTGTATTGCCCCAGATGTCGTAGTGTGG 2436
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2437 TTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCTAGGGTAGAGGCATAAAGTTCAGCAC 2510
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2511 AGCCACAGGCCACACCTTGTTATGGGCCTCAGAAGCCATCTCCTCTCCAGACCTGTACCACAAAGCTCCTAATG 2584
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2585 TAACACATCATTGTCCTCATTCAACTTGGCTGTATGCTATTGGAGGGTGGAAATCACATCTCCTGTTTATCCGT 2658
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2659 GTGCTTGTTAGGTGTCAGCCGCCACCCCCCCCCCATATGCAGATTTACTCGGCATGGTAGTGGCCAGCTTCTAA 2732
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2733 CACAGCTGGTATTTCAAGTCTCCTGGGACCTCACTCAGGAATGATACCCCCTCAGTAGAAGCAGCAGGTGATCT 2806
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2807 TAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGGA 2880
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2881 TCACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACAGTAGGCACAGTATAGTCGGATCATCAC 2954
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2955 ATCAGCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGGACTAAAGGTCTTTCAGGTCTCCTTGCCCTGTGAG 3028
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3029 TGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGGTGGGCCAGGCCCC 3102
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3103 TGCATGGGAAGGGAGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA 3176
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3177 GGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCC 3250
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3251 AGCGCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA 3324
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3325 GCCTGCTCTGCTGCCTTCCCTGGCAGTGTTCTGGGGGTGGATTCCCTACACCTAGATGTTCAAGGCCTTACTTT 3398
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3399 TCCTCCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGG 3472
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3473 CAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTG 3546
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3547 GGCCTGGTCCTGGTCCTTAGGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGAG 3620
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3621 GGGGATGACCCGCCTTGGACGTGTTTCTTTAACCTCATCCATATAATAGGGCCGTGGGATGGTTGTAGAGGTAA 3694
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3695 AGCAGGATGATGGTGTTTTAAGACCAGAGCTTGGGACCAGGGCTCCTACACCTAATTTTCTCTCCTGGTAGCTG 3768
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3769 AACAAAGGTCTAAATTAGCTTAACAAAAGAACAGGCTGCCGTCAGCCAGAGTTCTGAAGGCCATGCTTTCAGTT 3842
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3843 TCCCTTGTTGACAATTGCTCTCCAGTTCCTATGAAAGCACAGAGCCTTAGGGGGCCTGGCCACAGAACACAACC 3916
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3917 ATCTTAGGCCTGAGCTGTGAACAGCAGGGGGTTGTGTGTCTGTTCTGTTTCTCTGCTTGCCGAACTTTCTCAAT 3990
Query 901 --------------------- 900
Sbjct 3991 AAACCCTATTTCTTATTTATA 4011
