Nucleotide Global Alignment
Description
- Query:
- TRCN0000470560
- Subject:
- NR_136184.2
- Aligned Length:
- 4002
- Identities:
- 783
- Gaps:
- 3213
Alignment
Query 1 ---ATGG---AGCAGGC--GAACCCTTT---------------ACGTCCAGATGGCGAGTCCAAAGGA------ 45
||.| ||||.|| |.|||..|| |||| .||||||| |||
Sbjct 1 AGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTTTTGAAGACGT--GGATGGCG--------GGAATTCTC 64
Query 46 ------------GGTGTTTTAGCTCACTTGGAAAGGCTAGAGACCCAAGTGAGCAGATCCCGTAAACAGTCTGA 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 GCTTCTGGCCTGGGTGTTTTAGCTCACTTGGAAAGGCTAGAGACCCAAGTGAGCAGATCCCGTAAACAGTCTGA 138
Query 108 AGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCTGCGAGATG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 AGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCTGCGAGATG 212
Query 182 AGCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTAGAACCCAACCAAACA 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 AGCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTAGAACCCAACCAAACA 286
Query 256 GTGGAGATCAATGAGCAAGAAGCATTGGAAGAGAAATTGGAAAATGTGAAAGCCATTCTGCAGGCATATCATTT 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 GTGGAGATCAATGAGCAAGAAGCATTGGAAGAGAAATTGGAAAATGTGAAAGCCATTCTGCAGGCATATCATTT 360
Query 330 TACAGGCCTCAGTGGTAAACTGACCAGCCGAGGAGTTTGTGTCTGCATCAGTACTGCTTTTGAGGGGAACCTAT 403
Sbjct 361 -------------------------------------------------------------------------- 360
Query 404 TGGATTCCTATTTTGTGGACCTTGTCATACAGAAACCACTCCGGATACATCACCATTCAGTCCCAGTCTTCATT 477
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ---------------------------TACAGAAACCACTCCGGATACATCACCATTCAGTCCCAGTCTTCATT 407
Query 478 CCCCTGGAAGAGATAGCTGCAAAATATTTACAGACCAACATCCAGCACTTCCTGTTCAGTCTCTGCGAGTACCT 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 CCCCTGGAAGAGATAGCTGCAAAATATTTACAGACCAACATCCAGCACTTCCTGTTCAGTCTCTGCGAGTACCT 481
Query 552 GAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGTGACTTTGCAGCCCTCCTGACTGGGCCCT 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482 GAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGTGACTTTGCAGCCCTCCTGACTGGGCCCT 555
Query 626 TGCAGAGAAACCCACTGTGTAACTTGCTGTCATTTACTTACAAACTGGATCCAGGGGGTCAGTCCTTCCCGTTC 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 TGCAGAGAAACCCACTGTGTAACTTGCTGTCATTTACTTACAAACTGGATCCAGGGGGTCAGTCCTTCCCGTTC 629
Query 700 TGTGCTAGATTGCTGTATAAGGACCTCACAGCAACTCTTCCCACTGACGTCACCGTGACATGTCAAGGAGTGGA 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 TGTGCTAGATTGCTGTATAAGGACCTCACAGCAACTCTTCCCACTGACGTCACCGTGACATGTCAAGGAGTGGA 703
Query 774 AGTATTATCCACTTCATGGGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTGTACGAAGCCCTTGCATCAAG 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 704 AGTATTATCCACTTCATGGGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTGTACGAAGCCCTTGCATCAAG 777
Query 848 TGTTTGCCTCATTTACAAGAAAAGGAGAAAAGTTGGATATGAGTCTGGTCTCC--------------------- 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 TGTTTGCCTCATTTACAAGAAAAGGAGAAAAGTTGGATATGAGTCTGGTCTCCTAATAGATTGTTTTCACTGCA 851
Query 901 -------------------------------------------------------------------------- 900
Sbjct 852 CTGGGAGCACATCAGAGAAATAAATCCCCCCTCCCCTGCCAGGTGAAAGGAAATATTGCACTTTCTGTTCTCAT 925
Query 901 -------------------------------------------------------------------------- 900
Sbjct 926 GACTAAGGGGACAGGAGTTCCAGAAGAACCTTTCAAGATGATCAGGAACACCAGGACGAGGGCCGTCTCACCTC 999
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1000 ACTCGGACCACATGGAGACCTCCCTTCAAAATGGGAGCCATGTCCTGCCCCACCAAGCCCTGTCTGAAGTGGAG 1073
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1074 CTTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCTTTGTCCCAGCTCTGCCACC 1147
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1148 CTCCTGCTCACAGTGGTCAGGGCCCCTCAGGGGCAAGGACGGCAGGGATTGGAACGAGGGCTCTGGAAGGACTG 1221
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1222 TTCAGCCCTATGCCTAAGACCCCTATGCTGGGGACACTACAGGCACACACAGGAATAGCAGGGCCACCCTCAGA 1295
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1296 GCTCACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGAGTGTGCACTTCAATCC 1369
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1370 AGGAAGGTCGGGACTTCCTTCAGTTTCAAAAAATAAATTCTCCCTTCCGGTTTGGACTGTTGCAGGCTCGAGGC 1443
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1444 CATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGCCATTGGGGAAGGTGGCTAGCTTATCCC 1517
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1518 GCCCCTTCAAGAAGAAGGTCAGCAGCTCCCCCTTCCCCTTCACAAAGATGGGGCCTCGCCTCACAAAGCGGAAG 1591
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1592 CCGTACTCTCGGAGGATGACTTGGGTTTCTTCTACCACCTGGAGAGGGAGGGGGAGCAAGAACGTGGCGTTACG 1665
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1666 GGGGGAGCCTAGACTGAGGGCGGGTGGGGGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCA 1739
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1740 GTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAGAACC 1813
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1814 CTGGAGTGACTGGCTGGGGGCCTCCTCTCATCCAGAGACTTCTCTCCTAGGATGGCCATGGTCACCTGGGTGGC 1887
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1888 AGCACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTGTCCCTTTGCCCCTTTCGTGGAGCTTTTCTGCCAGA 1961
Query 901 -------------------------------------------------------------------------- 900
Sbjct 1962 CGCCACTGAGACAGATCACAAGGTATTAGAAGGTTCATACCCAAAGGTAGGCCATATGCATCTAGAACTTCAGC 2035
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2036 CCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTGTGCTGAGGCTAGCTATTGCAGAGATTCTTTTCCACTTG 2109
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2110 CCCCACGTCTCTGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAGGCAGGGGCACGTGGGAAAGCACTGTTC 2183
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2184 CGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCCCATGACC 2257
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2258 CCCGTGGACTCCATCCTGCTGGCTACATTGACTGTATTGCCCCAGATGTCGTAGTGTGGTTTCCGGGCTCCGAT 2331
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2332 GACCCCAGCCAGAACCCCGCCTTTGTTCATGCCTAGGGTAGAGGCATAAAGTTCAGCACAGCCACAGGCCACAC 2405
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2406 CTTGTTATGGGCCTCAGAAGCCATCTCCTCTCCAGACCTGTACCACAAAGCTCCTAATGTAACACATCATTGTC 2479
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2480 CTCATTCAACTTGGCTGTATGCTATTGGAGGGTGGAAATCACATCTCCTGTTTATCCGTGTGCTTGTTAGGTGT 2553
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2554 CAGCCGCCACCCCCCCCCCATATGCAGATTTACTCGGCATGGTAGTGGCCAGCTTCTAACACAGCTGGTATTTC 2627
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2628 AAGTCTCCTGGGACCTCACTCAGGAATGATACCCCCTCAGTAGAAGCAGCAGGTGATCTTAACTCCTTTCAAAG 2701
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2702 AGCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGGATCACAAACTCACTTC 2775
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2776 TCAGCCAGGCAGGCCAAGCTTCTATTGTAACAGTAGGCACAGTATAGTCGGATCATCACATCAGCTGGGTTTTT 2849
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2850 GGTTTAGTCATCTAGAGTCGTCTGGACTAAAGGTCTTTCAGGTCTCCTTGCCCTGTGAGTGCGTGAACCTCCCC 2923
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2924 ACCCGAATTGCCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGGTGGGCCAGGCCCCTGCATGGGAAGGGAG 2997
Query 901 -------------------------------------------------------------------------- 900
Sbjct 2998 CCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAAGGACTGGTTGTTGAT 3071
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3072 GTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGG 3145
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3146 ACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCTGCC 3219
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3220 TTCCCTGGCAGTGTTCTGGGGGTGGATTCCCTACACCTAGATGTTCAAGGCCTTACTTTTCCTCCCACAAAGGA 3293
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3294 GTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGGCAAAGACTGGGCAAT 3367
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3368 TGAGCAGAGGAGACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTC 3441
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3442 CTTAGGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGAGGGGGATGACCCGCCT 3515
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3516 TGGACGTGTTTCTTTAACCTCATCCATATAATAGGGCCGTGGGATGGTTGTAGAGGTAAAGCAGGATGATGGTG 3589
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3590 TTTTAAGACCAGAGCTTGGGACCAGGGCTCCTACACCTAATTTTCTCTCCTGGTAGCTGAACAAAGGTCTAAAT 3663
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3664 TAGCTTAACAAAAGAACAGGCTGCCGTCAGCCAGAGTTCTGAAGGCCATGCTTTCAGTTTCCCTTGTTGACAAT 3737
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3738 TGCTCTCCAGTTCCTATGAAAGCACAGAGCCTTAGGGGGCCTGGCCACAGAACACAACCATCTTAGGCCTGAGC 3811
Query 901 -------------------------------------------------------------------------- 900
Sbjct 3812 TGTGAACAGCAGGGGGTTGTGTGTCTGTTCTGTTTCTCTGCTTGCCGAACTTTCTCAATAAACCCTATTTCTTA 3885
Query 901 ------ 900
Sbjct 3886 TTTATA 3891
