Nucleotide Global Alignment
Description
- Query:
- TRCN0000470628
- Subject:
- NR_148056.2
- Aligned Length:
- 3395
- Identities:
- 1094
- Gaps:
- 2299
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGTGTCAACGAGCCCCCGAACGGTTCCGCCTCATTCCCTCTCTGTGTGCCTCGCAAGTCTCTGCTTAGTAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGTCACAGCTTCGGCGCGCGAGAGTGGCGTTGGCACGTCCAAACCCCGGGGTCCTCGGCCAGGCCAGGGGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCGTGCGGCGGGGCCGGGCCGGGCCGGGCGCGCCCAGCGGGCTCCGGGCACACGCCCCTCACCTGGGCGAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGGTGCGCAGGCGCTCAGCGCGGGGGCAGCGGCCGGGCGCTTAAGCCCGGCGCGGGCAAGAGTTGGACAGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGGCCGCGCCGGGCCGAGCTGTCGCCCGCGCCACCTCCACCGCCGCCGCTGCTACCGCCACCGCCACCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGCTGCAGCAGATCGCGGGAGAACGTCTGCGCGAAGCCCCGGTGCAGCCCTGGCGGGACCGCAGCAACCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGCGTGAGCAACAGCTTCCCGGCTGGAGGAGCCACTGCCCCACGCGCCCGCGGCCCGCGCGCCGAGATGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TACATTTCAACTCCATCAAATATTAAATTGATGTTTATGGGCTAACCTGGAAACCGAAAAACAGTTTGTTTCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TACAAGAATAAGAAAATATGTCCAAATTCCTGTCAGCTGACTTATAAAGGGACTTTTAGAACACAACCCAATGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGGGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCTTTTCTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGCAAATCCCACCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCAGCAGCAACAGCAGCAC 962
Query 1 -------------------------------------------------------ATGATGCATCCTTCACTGG 19
||||||||.||||||||||
Sbjct 963 AGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGG 1036
Query 20 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATG 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATG 1110
Query 94 GATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTC 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTC 1184
Query 168 TTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCA 1258
Query 242 AGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAAT 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAAT 1332
Query 316 CCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAG 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCAGCTGCTCCATCACTCCAATCACAGGCAACAACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAG 1406
Query 390 CAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTG 463
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1407 CAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGCTCATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTG 1480
Query 464 GAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCC 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GAGCAGCCACTTCTCCCTCCAAGAGCACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCC 1554
Query 538 AAAAAATTACTTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGG 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AAAAAATTACTTTATTGTTCACTATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGG 1628
Query 612 ATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAA 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATCTAAACACAAGACCATGGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAA 1702
Query 686 GATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTT 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GATTAAAGATGCAGAATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTT 1776
Query 760 CATGTTAATTCAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACC 833
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1777 CATGTTAATTCAGAAATTCAACTCAAAC-----------AGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACC 1839
Query 834 ACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCC 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 ACTGAAGCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCC 1913
Query 908 AGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCA 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 AGAAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCA 1987
Query 982 GCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCC 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1988 GCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCC 2061
Query 1056 TGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTAC---------------------- 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2062 TGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTACTAACGTCTGCAAACCCCAAGAC 2135
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2136 GTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCCACAAGGATTCAGCAATTTAAGCAGTTTGTGTTGCAGTACC 2209
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2210 CCCCATTCACCCACAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACG 2283
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2284 AGGGCTTTTAGAGACTGCTCCTATAATTGAGGAATCAGCAGCATAGGCTTTATCTCCCTACTTCCTCCCCCACC 2357
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2358 CTACCGCGTTCAATTTGTGTATCTCAGATATTTGATTTCTTGAGCATGTATTGGTCAGAAAGAAAAAGAAAGAA 2431
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2432 AACCATTCTCTATTTTTCCATGGGTATGATCTGGCTTAAAACAATATGGAATATTTTCCTGACAGACTTGAAAA 2505
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2506 CTAGGATCTTCCTCAGATGTCTGTAAATAACTCTGGTATCCAACTGGGTGTATTCTAGTGTGGAACAAAAAACA 2579
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2580 GTGAACACAAGTGCTTACTTGTGGATACTATCTTACCAACGGATCACAAAGTTCTCTTTTTGGTGTACTGTTGT 2653
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2654 TGACAGGGATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCT 2727
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2728 GAATTAAACATTTTTAGTTGCTGTGTAAATGTTAGGAAGCAAAGTAGCTTTGAATTTTCTCTGTAAGAGAATAA 2801
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2802 AAGATAAAATAATGTATTTTCTTTATTTCACATTTTATTTGGAGATATTTAAATGAAATAGAAAGCCATATAAC 2875
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2876 ATAGCTATAATTACTACCTGTTTGCTATTTTTGTTTAACTTATTTTGTAGCTTCCTCACTGGTTTGTGTTGCTA 2949
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2950 AGCAAACGTATACAAACAGAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAG 3023
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3024 ACAATGAATCCATGTATTTCTATATAAGTATCTTCTTCATTTTTAACCTGTTTTCATTTGTAATGATGCTACAT 3097
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3098 AATTTTGTGGCTCCCTAATGCAATAATGTACAGAAGATAAAAAAATTTATAATTGAACAATTTGTCTTTCTGTT 3171
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3172 CGCTGAATATATTGCAGGTCATGCTCCCATGCCCCCCTTTCTAAGCCGATATCAACAAGACTGGAATGTTTGTG 3245
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 3246 ATATCAGGGGCAAGAGTTATCATAGAACAACAAAATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTG 3319
Query 1108 ----------------------------------------------------------------- 1107
Sbjct 3320 TAAATGGTAAAATGTCTGTGTATTTTTTTAAATGTACCTTTTCAATAAAAGTACAAAAAATAAAA 3384
