Nucleotide Global Alignment
Description
- Query:
- TRCN0000470659
- Subject:
- XM_006537847.3
- Aligned Length:
- 5541
- Identities:
- 1389
- Gaps:
- 3985
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTGCGGCCGCCGCCTCCGCCTCCCAGGACGAGCTGAATCAGCTCGAACGGGTCTTTTTACGACTTGGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTGAAACAGATGAACAGTTACAAAATATTATATCTAAATTCCTTCCTCCTGTTCTGCTCAAACTGTCCAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAAGAAGGAGTACGGAAAAAAGTAATGGAACTGCTGGTCCATCTGAATAAACGTATAAAAAGCCGCCCCAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATACAGCTTCCAGTAGAAACACTATTGGTTCAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACGAATTTTAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATAATTTATGTTAAGATGGGCTATCCTCGCCTGCCAGTGGAAAAACAATGTGAGCTGGCCCCTACGCTTCTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGCCATGGAAGGGAAACCTCAGCCACAGCAGGATAGCTTAATGCATCTTTTAATACCAACTCTTTTTCACATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGTACCCGGCTGAATCATCAAAGTCAGCTTCTCCTTTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTGGACTTTATGCTAGATGTCCTTCTGATGCCTTACGGATATGTGTTAAATGAATCCCAGAGTCGCCAAAATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATCATCATCATCACAGGGTTCTTCTTCAAACAGTGGGGGAGGTTCTGGAATCCCACAGCCTCCCCCAGGAATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCTTTTATGCAGCTAAACGAGTTATTGGTGACAACCCGTGGACACCTGAACAGTTGGAACAGTGCAAATTGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATAGTGAAGTTCATAGAAGCTGAGCAGGTGCCTGAACTTGAAGCTGTTCTCCACCTGGTGATTGCTTCTAGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACACACGCCATAGTGTCGCGACAGCCGCAGACCTGGAGTTGAAAAGCAAGCAGAGCTTAATTGACTGGAATAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGCCATCATTAATAAGATGTACAAGGTGTACCTTGGGGATATACCACTGAAAACAAAAGAGGGAGCAGTTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAGCCGGAGCTGAAAAGAGACCCAGTCAGTACTAGAGTGAAGTTAAAGATTGTTCCTCATCTCCTGCGCTCTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACAAGCTGCTGAAACGTTCCCAGCTAACATTCAGGTGGTATATGATGGACTTTTTGGTACAAATACAAACTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGTTAAGAACACTGTCCCTGCAATTTGTACATCACATTTGTTTAACTTGCCCAGAAATCAAGATTAAACCACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGTCCTATGCTTTTGAATGGTCTCACTAAGCTAATAAATGAATATAAAGAGGACCCTAAACTACTGTCAATGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CATATTCAGCTGTTGGGAAACTCTCCAGTCGAATGCCCCATTTATTCACTAAGGATATAGCTCTTGTGCAGCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCTTTGAAGCCCTCTGTAAGGAAGAACCGGAGACTCGGCTTGCTATTCAGGAAGCGTTATCTATGATGGTTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCTTACAGTACCTTAGAAGGAGCACAGAGAACTTTAATGGAGGCACTTGTAGCTTCATACTTAATAAAGCCTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAGTTCAAGTTCGGCAAGTTGCAGTGAAATTTGCCAGCACGGTGTTTCCCTCAGATCATATACCTTCCAGATAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGCTCCTACTAGCTGCAGGAGACCCACGAGAAGAAGTCCATGGTGAAGCACAGCGCGTATTACGATGTCTTCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGTAGAAATAAAAAGGAAAGTGCTTCTAAGCAGATGCCATCTTTTCCAGAAATGGTATATTACATTCAAGAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGCTTCCCATCGAATGAAAACTCCAGTCAAATATATGACCGGAACCACAGTCCTTCCATTTAATCCAGCAGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTGGAGAGATAGTTCTGTACTTGCGCATGTGCCTGGCTCATAGTGCAGGGGTGGTACCCACTTCCCAGAGTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCTGATATGCAAGATCATGCTCCGGCTATTGGACGGTACATACGGGCTTTGATGTCAAGCAGCCAGGCGACAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTCATCTTCTAATAAGAGTGGAGAAACCAACCCTGTTCAGATCTACACTGGCCTGCTTCAACAGCTGCTAGCG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGGTTGGAGGTTTGCCAGTCATGTACTGTCTATTGGAAGCTGTGTCAGTGTATCCAGAAAAATTGGCTACCAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATTTGTAGACAAAACAGAATGGATCAAGAGTCTGATGAGTAGCAGTAAAGAAGAAATGCGTGAATTGGCGGCTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGTTTTATTCTGTGGTTGTGTCTACAGTGTCCGGAATTGAGTTAAAGTCAATGATAGAACAGCTGATAAAGGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACAAAAGACAATCATAGCCCTGAGGTTCAACATGGATCGTTGCTTGCCTTGGGATTCACTGTTGGAAGATACTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGCTAAGAAGAGAGTGAGGATGGCCGAGCAGCATGACCTAGAGACAGATGCTGACCTCTTGCCTGAGCAAGAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGATCATTCGGAGTGCTACAGAAACAATAGGTTCATTTTTAGACAGTACATCACCTCTGTTAGCAATTGCTGCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTACAGCCTTGGGTGAAATCGGCAGAAATGGTCCTCTTCCGATCCCCAGTGAAGGGTCTGGATTTACTAAACT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCACCTCGTAGAAAGCTTACTCAATAGAATTCCGTCTAGTAAAGAAACAAACAAGATGAAAGAACGAGCAATCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAACACTGGGCTATTTTCCTGTTGGAGATGGGGTTTTTCCCCACCAGAAACTCCTTTTGCAAGGTCTGATGGAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCTGTGGAGGCCAAGCAGATTGAGCTTCAGTTCACTATTGGTGAAGCCATTACCAGTGCTGCAATAGGAACTAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTCTGTGGCTGCCCGAGATGCCTGGCTGGTGACTGAAGAAGAATATATACCTCCTGCTGGTGCCAAAGTGAATG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATGTTGTCCCATGGGTTTTAGATGTTATTTTAAATAAACATATCATCAGCCCCAACCCACATGTCAGGCAAGCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCCTGCATCTGGCTTCTTTCTCTTGTGAGAAAACTAAGTACCCACAGAGAAGTGAAGTCCCATCTTAAAGAAAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCAGAGCGCATTTGTTTCAGTTCTGTCAGAAAATGATGAACTCAGCCAAGATGTTGCCTCAAAGGGGCTTGGGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGGTTTATGAGCTGGGCAATGAACAAGATCAACAAGAATTGGTGTCTACACTTGTAGAAACACTTATGACTGGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAAAGAGTCAAACATGAAGTTTCTGGAGAGACAGTGGTATTTCAAGGGGGTGGCCTTGGCAAAACACCTGATGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCAGGGCCTTTCTACTTACAAGGAGCTTTGCTCTCTGGCAAGTGATCTCAGTCAGCCAGATCTGGTATATAAAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTATGAATCTGGCAAATCATCATGCAATGTGGAACTCCAGGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ACCAGAGCTGGAGAACAACTGGCTCCTTTTCTGCCTCAACTAGTTCCTCGCCTTTATCGATACCAGTTTGATCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CAACCTTGGAATTCGACAAGCTATGACAAGCATTTGGAATGCATTGGTCACTGACAAGTCAATGGTGGATAAAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ATTTGAAGGAAATTCTTCAAGATTTGATTAAAAACCTTACCAGCAACATGTGGAGAGTTCGAGAATCCAGCTGT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTAGCTCTGAATGATTTATTGAGAGGAAGACCTTTAGATGACGTCATTGACAAACTTCCAGAAATGTGGGAAAC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ACTTTTTAGAGTACAAGATGATATTAAGGAGTCTGTACGGAAGGCAGCAGAACTGGCTCTGAAAACTCTGAGCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGGTTTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATTGCTGTCCTCCTGCCCTGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CTTCTGGACAAAGGAATGATGAGTCCTGTGACGGAAGTCCGAGCCCTCAGCATTAACACTCTTGTGAAGATCAG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CAAAAGTGCAGGAGCCATGTTGAAACCACACGCACCCAAACTCATACCAGCACTCTTAGAGTCCTTAAGTGTGT 3922
Query 1 -----------------------------------------------------------ATGGATAGTGCTCGG 15
|||||.||||||||.
Sbjct 3923 TGGAGCCTCAAGTTCTCAATTATTTGAGTCTCCGGGCTACAGAACAAGAAAAGGATGTAATGGACAGTGCTCGA 3996
Query 16 CTTAGTGCTGCCAAATCTTCTCCAATGATGGAAACAATCAACATGTGCCTGCAATACCTTGATGTGTCAGTGCT 89
||.||||||||||||||.|||||.||||||||.|||||||||||||||||||||||.||||||||.||.|||||
Sbjct 3997 CTCAGTGCTGCCAAATCCTCTCCCATGATGGAGACAATCAACATGTGCCTGCAATATCTTGATGTTTCGGTGCT 4070
Query 90 GGGCGAGCTAGTTCCTAGGTTGTGTGAACTGATCAGAAGTGGTGTAGGTCTTGGAACTAAGGGTGGCTGTGCCA 163
.||.||.||||||||||||.|.|||||.||||||||||||||||||||||||||.||||||||.||||||||||
Sbjct 4071 AGGTGAACTAGTTCCTAGGCTATGTGAGCTGATCAGAAGTGGTGTAGGTCTTGGGACTAAGGGGGGCTGTGCCA 4144
Query 164 GTGTCATTGTGTCATTAACTACTCAGTGTCCTCAGGACCTAACACCTTACTCAGGTAAACTTATGAGTGCTTTG 237
|||||||.|||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||
Sbjct 4145 GTGTCATCGTGTCTTTAACTACTCAGTGTCCCCAGGACCTGACACCTTACTCAGGTAAACTTATGAGTGCTTTG 4218
Query 238 CTGAGTGGCCTGACAGATCGGAACAGTGTGATTCAGAAATCTTGTGCATTTGCTATGGGCCATTTAGTTCGGAC 311
||.|||||.||||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||||||||||
Sbjct 4219 CTTAGTGGTCTGACAGATCGGAACAGTGTAATTCAGAAATCCTGTGCATTTGCCATGGGCCATTTAGTTCGGAC 4292
Query 312 CTCACGGGATAGCAGCACTGAAAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGAGAAAGAAGAACCTATCT 385
.||||||||||||||||||||.|||||.||.||||||||||||||.|||||.|||||||||||.||||||.|||
Sbjct 4293 TTCACGGGATAGCAGCACTGAGAAACTGCTACAGAAGCTCAATGGCTGGTACATGGAGAAAGATGAACCTGTCT 4366
Query 386 ACAAGACCTCTTGTGCTTTGACTATTCATGCTATTGGACGATACAGCCCTGATGTATTAAAGAATCATGCAAAA 459
|.|||||.||||||||||||||.||||||||.||||||.||||||||||.||||||||.|||||.|||||.|||
Sbjct 4367 ATAAGACGTCTTGTGCTTTGACAATTCATGCAATTGGAAGATACAGCCCAGATGTATTGAAGAACCATGCTAAA 4440
Query 460 GAAGTCCTGCCTCTGGCATTTTTAGGCATGCATGAAATTGCTGATGAGGAGAAATCCGAAAAAGAAGAATGTAA 533
|||||.|||||..|.||||||.||||||||||||||||||||||||||||||||||.|||||||||||.|||||
Sbjct 4441 GAAGTTCTGCCCTTAGCATTTCTAGGCATGCATGAAATTGCTGATGAGGAGAAATCTGAAAAAGAAGAGTGTAA 4514
Query 534 TTTATGGACCGAAGTGTGGCAGGAAAACGTACCTGGATCCTTTGGTGGCATTCGATTATACCTGCAGGAGTTAA 607
|.|.|||||.|||||||||||||||||.||||||||.||||||||.||.||||||||.|||||||||||.||.|
Sbjct 4515 TATGTGGACTGAAGTGTGGCAGGAAAATGTACCTGGCTCCTTTGGAGGTATTCGATTGTACCTGCAGGAATTGA 4588
Query 608 TTACTATTACCCAGAAGGCTTTGCAGTCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCATGGCATCA 681
||||||||||||||||||||||.||.||.||.||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 4589 TTACTATTACCCAGAAGGCTTTACAATCACAATCTTGGAAAATGAAAGCCCAGGGTGCAATTGCTATGGCATCA 4662
Query 682 ATTGCAAAACAGACTAGCTCTCTAGTACCTCCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGC 755
|||.|||||||.||.||||||||.||||||||.||.||.||.|||||.||||..||||||.|||||||||||||
Sbjct 4663 ATTTCAAAACAAACAAGCTCTCTTGTACCTCCTTACCTGGGGATGATCCTGAGTGCATTGATGCAAGGCCTGGC 4736
Query 756 TGGAAGAACGTGGGCAGGAAAGGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGACAGCTTGCAGTGCAGAGC 829
|||||||||.||||||||||||||.||.|||||||||||||||||||||||.|||||.|||||||||.|||||.
Sbjct 4737 TGGAAGAACATGGGCAGGAAAGGAAGAACTATTGAAAGCCATTGCCTGTGTAGTGACGGCTTGCAGTACAGAGT 4810
Query 830 TGGAAAAGTCTGTGCCCAATCAACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAG 903
|||||||||||||||||||||||||||.||||||||||||||||||.|||||..|||||||.|||.||||||||
Sbjct 4811 TGGAAAAGTCTGTGCCCAATCAACCCACCACAAATGAAATTCTTCAGGCTGTCTTGAAGGAGTGTTGCAAAGAG 4884
Query 904 AATGTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTCCA 977
|||.|||||||.||||||||.|||||||||||||||||||||.|.|||||.|||||||||||.|||||||||||
Sbjct 4885 AATCTCAAATATAAGATTGTTGCAATCAGCTGTGCAGCTGATGTTTTGAAAGCCACCAAAGAAGACAGATTCCA 4958
Query 978 GGAGTTCTCTAACATTGTCATACCTCTCATCAAGAAGAACTCACTTGAAAGCAGTGGG-GTCCGGACAACCAAA 1050
||||||.|||.|||||||||||||.||||||||||||||||||||||||||.| |||| |||||.||.||||||
Sbjct 4959 GGAGTTTTCTGACATTGTCATACCCCTCATCAAGAAGAACTCACTTGAAAGTA-TGGGAGTCCGTACCACCAAA 5031
Query 1051 AATGAAGAGGAGAATGAAAAGGAAAAGGAGCTCCAGCTGGAATATCTGCTGGGTGCCTTTGAAAGCCTGGGCAA 1124
..||||||.||.|||||.|||||||..|||||.||||||||.|.|||.|||||.||||||||.|||||||||||
Sbjct 5032 GCTGAAGATGAAAATGAGAAGGAAAGAGAGCTGCAGCTGGAGTCTCTACTGGGCGCCTTTGAGAGCCTGGGCAA 5105
Query 1125 AGCCTGGCCGCGAAACGCGGAGACCCAACGTTGTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAA 1198
|||.|||||..|.|||.|.||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||
Sbjct 5106 AGCATGGCCCAGGAACCCAGACACCCAACGTTGTTATCGGCAGGAGCTGTGCAAACTGATGTGTGAGCGGCTAA 5179
Query 1199 AACTCAGCACGTGGAAAGTGCAGCTAGGAGTCCTGCAATCAATGAATGCCTTTTTTCAGGGGTTAATGCTTTTG 1272
.|||||||||||||||||||||||||||.|||||.||.||||||||.||||||||.|||||||||||||||.||
Sbjct 5180 GACTCAGCACGTGGAAAGTGCAGCTAGGTGTCCTCCAGTCAATGAACGCCTTTTTCCAGGGGTTAATGCTTCTG 5253
Query 1273 GAAGAAGAACATGCCGATCCTGAGGCTTTGGCTGAAATTCTGCTTGAAACTTGTAAATCAATCACATATTCTTT 1346
|||||.|||||.||.||||||||.|||.|||||||.|||||.||.|||||.||.||||||||.||.||.|||||
Sbjct 5254 GAAGAGGAACACGCAGATCCTGAAGCTCTGGCTGAGATTCTTCTCGAAACATGCAAATCAATTACTTACTCTTT 5327
Query 1347 AGAAAATAAGACCTACTCATCTGTGAGAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAG 1420
||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||||||||||||||||
Sbjct 5328 AGAAAATAAGACCTACTCATCTGTGAGAACAGAAGCTTTATCTGTGGTAGAATTACTGCTTAAAAAACTTGAAG 5401
Query 1421 AATCTAAACAGTGGGAATGTTTGACATCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAGCTACTATGGAGCCA 1494
||.|||||||.||||||.||||||||.|.||||||||||..||.||.||||||||||||||||||||||||.||
Sbjct 5402 AAGCTAAACAATGGGAAAGTTTGACAGCAGAATGCAGAGGACTTCTGATTGAGTCTTTAGCTACTATGGAGACA 5475
Query 1495 GACAGCAGACCTGAACTGCAGGAGAAAGCAGCGTTACTGAAGAAAAAACACTTGAAAATCTGGAA 1559
||||.||||||.||.||||||||||||||..|..||.||||| |||||||||||||.|||||||
Sbjct 5476 GACAACAGACCAGAGCTGCAGGAGAAAGCCTCAGTATTGAAG--AAAACACTTGAAAGTCTGGAA 5538
