Nucleotide Global Alignment
Description
- Query:
- TRCN0000470659
- Subject:
- XM_006537848.3
- Aligned Length:
- 5523
- Identities:
- 1389
- Gaps:
- 3967
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTATCACATTGATTGTAGAGATCAGCTCGAACGGGTCTTTTTACGACTTGGCCATGCTGAAACAGATGAACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTACAAAATATTATATCTAAATTCCTTCCTCCTGTTCTGCTCAAACTGTCCAGCACCCAAGAAGGAGTACGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAAAGTAATGGAACTGCTGGTCCATCTGAATAAACGTATAAAAAGCCGCCCCAAAATACAGCTTCCAGTAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACACTATTGGTTCAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACGAATTTTACTATAATTTATGTTAAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCTATCCTCGCCTGCCAGTGGAAAAACAATGTGAGCTGGCCCCTACGCTTCTTACTGCCATGGAAGGGAAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCAGCCACAGCAGGATAGCTTAATGCATCTTTTAATACCAACTCTTTTTCACATGAAGTACCCGGCTGAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAAAGTCAGCTTCTCCTTTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTGCTCTTGGACTTTATGCTAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTCCTTCTGATGCCTTACGGATATGTGTTAAATGAATCCCAGAGTCGCCAAAATTCATCATCATCATCACAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTTCTTCTTCAAACAGTGGGGGAGGTTCTGGAATCCCACAGCCTCCCCCAGGAATGAGCTTTTATGCAGCTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGAGTTATTGGTGACAACCCGTGGACACCTGAACAGTTGGAACAGTGCAAATTGGGTATAGTGAAGTTCATAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCTGAGCAGGTGCCTGAACTTGAAGCTGTTCTCCACCTGGTGATTGCTTCTAGTGACACACGCCATAGTGTCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGACAGCCGCAGACCTGGAGTTGAAAAGCAAGCAGAGCTTAATTGACTGGAATAACCCTGCCATCATTAATAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGTACAAGGTGTACCTTGGGGATATACCACTGAAAACAAAAGAGGGAGCAGTTCTAAAGCCGGAGCTGAAAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGACCCAGTCAGTACTAGAGTGAAGTTAAAGATTGTTCCTCATCTCCTGCGCTCTAGACAAGCTGCTGAAACGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCCAGCTAACATTCAGGTGGTATATGATGGACTTTTTGGTACAAATACAAACTCAAAGTTAAGAACACTGTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGCAATTTGTACATCACATTTGTTTAACTTGCCCAGAAATCAAGATTAAACCACTAGGTCCTATGCTTTTGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGTCTCACTAAGCTAATAAATGAATATAAAGAGGACCCTAAACTACTGTCAATGGCATATTCAGCTGTTGGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACTCTCCAGTCGAATGCCCCATTTATTCACTAAGGATATAGCTCTTGTGCAGCAGCTCTTTGAAGCCCTCTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGGAAGAACCGGAGACTCGGCTTGCTATTCAGGAAGCGTTATCTATGATGGTTGGAGCTTACAGTACCTTAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGAGCACAGAGAACTTTAATGGAGGCACTTGTAGCTTCATACTTAATAAAGCCTGAAGTTCAAGTTCGGCAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGCAGTGAAATTTGCCAGCACGGTGTTTCCCTCAGATCATATACCTTCCAGATACTTGCTCCTACTAGCTGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAGACCCACGAGAAGAAGTCCATGGTGAAGCACAGCGCGTATTACGATGTCTTCCTGGTAGAAATAAAAAGGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGTGCTTCTAAGCAGATGCCATCTTTTCCAGAAATGGTATATTACATTCAAGAAAAGGCTTCCCATCGAATGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAACTCCAGTCAAATATATGACCGGAACCACAGTCCTTCCATTTAATCCAGCAGCATTTGGAGAGATAGTTCTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TACTTGCGCATGTGCCTGGCTCATAGTGCAGGGGTGGTACCCACTTCCCAGAGTTTGGCTGATATGCAAGATCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGCTCCGGCTATTGGACGGTACATACGGGCTTTGATGTCAAGCAGCCAGGCGACAGCTTCATCTTCTAATAAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGGAGAAACCAACCCTGTTCAGATCTACACTGGCCTGCTTCAACAGCTGCTAGCGGGGGTTGGAGGTTTGCCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTCATGTACTGTCTATTGGAAGCTGTGTCAGTGTATCCAGAAAAATTGGCTACCAAATTTGTAGACAAAACAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATGGATCAAGAGTCTGATGAGTAGCAGTAAAGAAGAAATGCGTGAATTGGCGGCTTTGTTTTATTCTGTGGTTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGTCTACAGTGTCCGGAATTGAGTTAAAGTCAATGATAGAACAGCTGATAAAGGCCACAAAAGACAATCATAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTGAGGTTCAACATGGATCGTTGCTTGCCTTGGGATTCACTGTTGGAAGATACTTGGCTAAGAAGAGAGTGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GATGGCCGAGCAGCATGACCTAGAGACAGATGCTGACCTCTTGCCTGAGCAAGAGGAGATCATTCGGAGTGCTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGAAACAATAGGTTCATTTTTAGACAGTACATCACCTCTGTTAGCAATTGCTGCCTGTACAGCCTTGGGTGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATCGGCAGAAATGGTCCTCTTCCGATCCCCAGTGAAGGGTCTGGATTTACTAAACTGCACCTCGTAGAAAGCTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACTCAATAGAATTCCGTCTAGTAAAGAAACAAACAAGATGAAAGAACGAGCAATCCAAACACTGGGCTATTTTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTGTTGGAGATGGGGTTTTTCCCCACCAGAAACTCCTTTTGCAAGGTCTGATGGATTCTGTGGAGGCCAAGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTGAGCTTCAGTTCACTATTGGTGAAGCCATTACCAGTGCTGCAATAGGAACTAACTCTGTGGCTGCCCGAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCCTGGCTGGTGACTGAAGAAGAATATATACCTCCTGCTGGTGCCAAAGTGAATGATGTTGTCCCATGGGTTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TAGATGTTATTTTAAATAAACATATCATCAGCCCCAACCCACATGTCAGGCAAGCAGCCTGCATCTGGCTTCTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCTCTTGTGAGAAAACTAAGTACCCACAGAGAAGTGAAGTCCCATCTTAAAGAAATTCAGAGCGCATTTGTTTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGTTCTGTCAGAAAATGATGAACTCAGCCAAGATGTTGCCTCAAAGGGGCTTGGGTTGGTTTATGAGCTGGGCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGAACAAGATCAACAAGAATTGGTGTCTACACTTGTAGAAACACTTATGACTGGCAAAAGAGTCAAACATGAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTTTCTGGAGAGACAGTGGTATTTCAAGGGGGTGGCCTTGGCAAAACACCTGATGGTCAGGGCCTTTCTACTTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAAGGAGCTTTGCTCTCTGGCAAGTGATCTCAGTCAGCCAGATCTGGTATATAAATTTATGAATCTGGCAAATC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATCATGCAATGTGGAACTCCAGGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCAGAGCTGGAGAACAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTGGCTCCTTTTCTGCCTCAACTAGTTCCTCGCCTTTATCGATACCAGTTTGATCCCAACCTTGGAATTCGACA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGCTATGACAAGCATTTGGAATGCATTGGTCACTGACAAGTCAATGGTGGATAAATATTTGAAGGAAATTCTTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AAGATTTGATTAAAAACCTTACCAGCAACATGTGGAGAGTTCGAGAATCCAGCTGTTTAGCTCTGAATGATTTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTGAGAGGAAGACCTTTAGATGACGTCATTGACAAACTTCCAGAAATGTGGGAAACACTTTTTAGAGTACAAGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGATATTAAGGAGTCTGTACGGAAGGCAGCAGAACTGGCTCTGAAAACTCTGAGCAAGGTTTGTGTGAAAATGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATTGCTGTCCTCCTGCCCTGCCTTCTGGACAAAGGAATG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATGAGTCCTGTGACGGAAGTCCGAGCCCTCAGCATTAACACTCTTGTGAAGATCAGCAAAAGTGCAGGAGCCAT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GTTGAAACCACACGCACCCAAACTCATACCAGCACTCTTAGAGTCCTTAAGTGTGTTGGAGCCTCAAGTTCTCA 3922
Query 1 -----------------------------------------ATGGATAGTGCTCGGCTTAGTGCTGCCAAATCT 33
|||||.||||||||.||.||||||||||||||.
Sbjct 3923 ATTATTTGAGTCTCCGGGCTACAGAACAAGAAAAGGATGTAATGGACAGTGCTCGACTCAGTGCTGCCAAATCC 3996
Query 34 TCTCCAATGATGGAAACAATCAACATGTGCCTGCAATACCTTGATGTGTCAGTGCTGGGCGAGCTAGTTCCTAG 107
|||||.||||||||.|||||||||||||||||||||||.||||||||.||.|||||.||.||.|||||||||||
Sbjct 3997 TCTCCCATGATGGAGACAATCAACATGTGCCTGCAATATCTTGATGTTTCGGTGCTAGGTGAACTAGTTCCTAG 4070
Query 108 GTTGTGTGAACTGATCAGAAGTGGTGTAGGTCTTGGAACTAAGGGTGGCTGTGCCAGTGTCATTGTGTCATTAA 181
|.|.|||||.||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||||
Sbjct 4071 GCTATGTGAGCTGATCAGAAGTGGTGTAGGTCTTGGGACTAAGGGGGGCTGTGCCAGTGTCATCGTGTCTTTAA 4144
Query 182 CTACTCAGTGTCCTCAGGACCTAACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTGAGTGGCCTGACAGAT 255
|||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||.|||||||||
Sbjct 4145 CTACTCAGTGTCCCCAGGACCTGACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTTAGTGGTCTGACAGAT 4218
Query 256 CGGAACAGTGTGATTCAGAAATCTTGTGCATTTGCTATGGGCCATTTAGTTCGGACCTCACGGGATAGCAGCAC 329
|||||||||||.|||||||||||.|||||||||||.||||||||||||||||||||.|||||||||||||||||
Sbjct 4219 CGGAACAGTGTAATTCAGAAATCCTGTGCATTTGCCATGGGCCATTTAGTTCGGACTTCACGGGATAGCAGCAC 4292
Query 330 TGAAAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGAGAAAGAAGAACCTATCTACAAGACCTCTTGTGCTT 403
|||.|||||.||.||||||||||||||.|||||.|||||||||||.||||||.||||.|||||.||||||||||
Sbjct 4293 TGAGAAACTGCTACAGAAGCTCAATGGCTGGTACATGGAGAAAGATGAACCTGTCTATAAGACGTCTTGTGCTT 4366
Query 404 TGACTATTCATGCTATTGGACGATACAGCCCTGATGTATTAAAGAATCATGCAAAAGAAGTCCTGCCTCTGGCA 477
||||.||||||||.||||||.||||||||||.||||||||.|||||.|||||.||||||||.|||||..|.|||
Sbjct 4367 TGACAATTCATGCAATTGGAAGATACAGCCCAGATGTATTGAAGAACCATGCTAAAGAAGTTCTGCCCTTAGCA 4440
Query 478 TTTTTAGGCATGCATGAAATTGCTGATGAGGAGAAATCCGAAAAAGAAGAATGTAATTTATGGACCGAAGTGTG 551
|||.||||||||||||||||||||||||||||||||||.|||||||||||.||||||.|.|||||.||||||||
Sbjct 4441 TTTCTAGGCATGCATGAAATTGCTGATGAGGAGAAATCTGAAAAAGAAGAGTGTAATATGTGGACTGAAGTGTG 4514
Query 552 GCAGGAAAACGTACCTGGATCCTTTGGTGGCATTCGATTATACCTGCAGGAGTTAATTACTATTACCCAGAAGG 625
|||||||||.||||||||.||||||||.||.||||||||.|||||||||||.||.|||||||||||||||||||
Sbjct 4515 GCAGGAAAATGTACCTGGCTCCTTTGGAGGTATTCGATTGTACCTGCAGGAATTGATTACTATTACCCAGAAGG 4588
Query 626 CTTTGCAGTCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAAAACAGACTAGC 699
||||.||.||.||.||.|||||||||||||||||||||||||||||.||||||||||||.|||||||.||.|||
Sbjct 4589 CTTTACAATCACAATCTTGGAAAATGAAAGCCCAGGGTGCAATTGCTATGGCATCAATTTCAAAACAAACAAGC 4662
Query 700 TCTCTAGTACCTCCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGG 773
|||||.||||||||.||.||.||.|||||.||||..||||||.||||||||||||||||||||||.||||||||
Sbjct 4663 TCTCTTGTACCTCCTTACCTGGGGATGATCCTGAGTGCATTGATGCAAGGCCTGGCTGGAAGAACATGGGCAGG 4736
Query 774 AAAGGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAAAGTCTGTGCCCA 847
||||||.||.|||||||||||||||||||||||.|||||.|||||||||.|||||.||||||||||||||||||
Sbjct 4737 AAAGGAAGAACTATTGAAAGCCATTGCCTGTGTAGTGACGGCTTGCAGTACAGAGTTGGAAAAGTCTGTGCCCA 4810
Query 848 ATCAACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGAATGTCAAATACAAGATT 921
|||||||||.||||||||||||||||||.|||||..|||||||.|||.|||||||||||.|||||||.||||||
Sbjct 4811 ATCAACCCACCACAAATGAAATTCTTCAGGCTGTCTTGAAGGAGTGTTGCAAAGAGAATCTCAAATATAAGATT 4884
Query 922 GTAGCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTCCAGGAGTTCTCTAACATTGT 995
||.|||||||||||||||||||||.|.|||||.|||||||||||.|||||||||||||||||.|||.|||||||
Sbjct 4885 GTTGCAATCAGCTGTGCAGCTGATGTTTTGAAAGCCACCAAAGAAGACAGATTCCAGGAGTTTTCTGACATTGT 4958
Query 996 CATACCTCTCATCAAGAAGAACTCACTTGAAAGCAGTGGG-GTCCGGACAACCAAAAATGAAGAGGAGAATGAA 1068
||||||.||||||||||||||||||||||||||.| |||| |||||.||.||||||..||||||.||.|||||.
Sbjct 4959 CATACCCCTCATCAAGAAGAACTCACTTGAAAGTA-TGGGAGTCCGTACCACCAAAGCTGAAGATGAAAATGAG 5031
Query 1069 AAGGAAAAGGAGCTCCAGCTGGAATATCTGCTGGGTGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAAACGC 1142
|||||||..|||||.||||||||.|.|||.|||||.||||||||.||||||||||||||.|||||..|.|||.|
Sbjct 5032 AAGGAAAGAGAGCTGCAGCTGGAGTCTCTACTGGGCGCCTTTGAGAGCCTGGGCAAAGCATGGCCCAGGAACCC 5105
Query 1143 GGAGACCCAACGTTGTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAAAACTCAGCACGTGGAAAG 1216
.||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||.|||||||||||||||||
Sbjct 5106 AGACACCCAACGTTGTTATCGGCAGGAGCTGTGCAAACTGATGTGTGAGCGGCTAAGACTCAGCACGTGGAAAG 5179
Query 1217 TGCAGCTAGGAGTCCTGCAATCAATGAATGCCTTTTTTCAGGGGTTAATGCTTTTGGAAGAAGAACATGCCGAT 1290
||||||||||.|||||.||.||||||||.||||||||.|||||||||||||||.|||||||.|||||.||.|||
Sbjct 5180 TGCAGCTAGGTGTCCTCCAGTCAATGAACGCCTTTTTCCAGGGGTTAATGCTTCTGGAAGAGGAACACGCAGAT 5253
Query 1291 CCTGAGGCTTTGGCTGAAATTCTGCTTGAAACTTGTAAATCAATCACATATTCTTTAGAAAATAAGACCTACTC 1364
|||||.|||.|||||||.|||||.||.|||||.||.||||||||.||.||.|||||||||||||||||||||||
Sbjct 5254 CCTGAAGCTCTGGCTGAGATTCTTCTCGAAACATGCAAATCAATTACTTACTCTTTAGAAAATAAGACCTACTC 5327
Query 1365 ATCTGTGAGAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAGAATCTAAACAGTGGGAAT 1438
||||||||||||||||||||||||||||.|||||||.|||||||||||||||||||||.|||||||.||||||.
Sbjct 5328 ATCTGTGAGAACAGAAGCTTTATCTGTGGTAGAATTACTGCTTAAAAAACTTGAAGAAGCTAAACAATGGGAAA 5401
Query 1439 GTTTGACATCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAGCTACTATGGAGCCAGACAGCAGACCTGAACTG 1512
||||||||.|.||||||||||..||.||.||||||||||||||||||||||||.||||||.||||||.||.|||
Sbjct 5402 GTTTGACAGCAGAATGCAGAGGACTTCTGATTGAGTCTTTAGCTACTATGGAGACAGACAACAGACCAGAGCTG 5475
Query 1513 CAGGAGAAAGCAGCGTTACTGAAGAAAAAACACTTGAAAATCTGGAA 1559
|||||||||||..|..||.||||| |||||||||||||.|||||||
Sbjct 5476 CAGGAGAAAGCCTCAGTATTGAAG--AAAACACTTGAAAGTCTGGAA 5520
