Nucleotide Global Alignment
Description
- Query:
- TRCN0000470684
- Subject:
- XM_017315441.1
- Aligned Length:
- 3021
- Identities:
- 1654
- Gaps:
- 1140
Alignment
Query 1 ATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCAGAGATGGAAGATGC---TAATTCTGAAAAGAGTAT 71
|||||||||.|||||.|||.|||.||.||||||||..|.||||||||.||||| ||||||||||||||||.|
Sbjct 1 ATGGCCGCCACGGAGCCCCCGTCCCTGCGGGAGCAAGCTGAGATGGATGATGCTGATAATTCTGAAAAGAGTGT 74
Query 72 AAATGAAGAAAATGGAGAAGTATCAGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATA 145
||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct 75 AAATGAAGAAAATGGAGAGGTATCAGAAGACCAATCTCAAAATAAACACAGTCGTCACAAAAAAAAGAAGCATA 148
Query 146 AACACAGAAGTAAACATAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCAT 219
||||||||||||||||||||||||||||||||||||||||||||||.|.||||||||||||.||||||||||||
Sbjct 149 AACACAGAAGTAAACATAAGAAACATAAACATTCCTCAGAAGAAGATAGGGATAAAAAACACAAACATAAGCAT 222
Query 220 AAACATAAGAAACACAAAAGAAAAGAGGTTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAAC 293
||.||||||||.||||||.|.|||||.|||||.||.|||||.||.|||||.||..||||.||.|||||||||||
Sbjct 223 AAGCATAAGAAGCACAAACGGAAAGAAGTTATCGAGGCTTCCGACAAAGAAGGCCTGTCCCCTGCAAAAAGAAC 296
Query 294 TAAACTTGATGATTTAGCTTTGCTAGAAGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATG 367
|||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||.||.||||||||||
Sbjct 297 TAAGCTTGATGATTTAGCTTTGCTGGAAGACTTGGAAAAGCAGAGAGCCTTGATTAAAGCTGAGCTTGATAATG 370
Query 368 AGTTAATGGAAGGAAAGGTCCAGTCTGGTATGGGGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAG 441
||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.
Sbjct 371 AGTTAATGGAGGGGAAGGTCCAGTCTGGAATGGGGCTCATTTTGCAAGGCTATGAGTCTGGCTCCGAAGAAGAA 444
Query 442 GGGGAAATTCATGAAAAGGCAAGAAATGGAAATAGGTCTAGTACTAGATCTTCAAGTACAAAGGGGAAACTTGA 515
||.||.|||||.|||||||||||||||||.||.|||||.|||||.||.|||||.|||||...|||.||||||||
Sbjct 445 GGAGAGATTCACGAAAAGGCAAGAAATGGGAACAGGTCCAGTACCAGGTCTTCCAGTACTCGGGGAAAACTTGA 518
Query 516 ACTTGTGGACAATAAAATTACTACAAAGAAACGAAGTAAAAGCAGATCCAAAGAACGGACTAGACATAGGTCTG 589
|.||..||||||.||||.||.|.||||||||||||||||.||||||||||||||||||||.||.||.||.||.|
Sbjct 519 AATTACGGACAACAAAAATAGTGCAAAGAAACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGCACAGATCGG 592
Query 590 ATAAAAAGAAAAGTAAGGGGGGTATTGAAATCGTTAAAGAGAAAACAACTAGGAGCAAGTCAAAGGAGAGGAAA 663
|.||||.||||||.|||||||.|...|||||..|.|.|||||||.|||..|||||||||||.||||||||||.|
Sbjct 593 ACAAAAGGAAAAGCAAGGGGGCTGGGGAAATGCTGAGAGAGAAAGCAAACAGGAGCAAGTCCAAGGAGAGGAGA 666
Query 664 AAATCTAAAAGCCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAATCCCCTACCCTTAGAAG 737
|||||.||||||||||||||||||||.|||||||||||.|||||.||.||.|||||.||||||.|.||.|||.|
Sbjct 667 AAATCCAAAAGCCCATCCAAAAGAAGCAAGTCTCAAGACCAAGCTAGAAAGTCAAAGTCCCCTCCACTCAGACG 740
Query 738 GCGATCTCAAGAGAAAATTGGTAAGGCCAGATCTCCTACTGATGATAAGGGTTAAAATTGAAGATAAAAGTAAA 811
|||.||.|||||||||.|.||.|||||||||||||||.||||.||.|| |.|.||.|.||||||.|||.|.|||
Sbjct 741 GCGGTCCCAAGAGAAAGTGGGGAAGGCCAGATCTCCTGCTGAGGAGAA-GATGAAGAGTGAAGAGAAAGGCAAA 813
Query 812 TCAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTAGAAGTCGCGATCGAGGTAAAAAATCCAGATCCCC 885
..|||.||||||||||||||.||||||.|||||||| ||.|||||.|||.||..|||||||||||..|||||
Sbjct 814 ATAAAGGATAGGAAAAAATCACCAATTGTAAATGAA---AGGAGTCGAGATAGATCTAAAAAATCCAAGTCCCC 884
Query 886 AGTTGATTTAAGAGGTAAATCCAAAGACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTG 959
||||||.|||||||.||||||||||||||||||||||.|||||||||||.|.||.||||||||.|||||||.||
Sbjct 885 AGTTGACTTAAGAGATAAATCCAAAGACAGAAGGTCAAGGTCCAAAGAGCGGAAGTCAAAACGATCTGAAATTG 958
Query 960 ATAAAGAAAAGAAGCCAATTAAATCTCCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGCAGA 1033
|.|||||||||||||||||||||||.||.||.||.||||||||.||||||||.|||||||||||||||||.|||
Sbjct 959 ACAAAGAAAAGAAGCCAATTAAATCACCTTCAAAGGATGCTTCTTCTGGGAAGGAAAATAGGTCACCCAGTAGA 1032
Query 1034 AGACCTGGTCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCC 1107
||||||||.||||||||||||||||||||||||||||||||||..||.||.||.|||||||||||.||||||||
Sbjct 1033 AGACCTGGCCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACTGCGAGACAAGTCAAGAAGAAGTAGGTCTCC 1106
Query 1108 ACTTTTGAATGATAGAAGATCTAAGCAGAGCAAATCCCCCTCGCGGACACTGTCTCCTGGGAGAAGAGCCAAGA 1181
.|||.|.|||||.|||||||||||||||||||||||.||.||.||.||.||||||||.||.|||||.|||||||
Sbjct 1107 GCTTCTCAATGACAGAAGATCTAAGCAGAGCAAATCGCCTTCTCGAACTCTGTCTCCAGGCAGAAGGGCCAAGA 1180
Query 1182 GCCGATCCTTAGAAAGAAAACGACGAGAACCAGAGAGGAGACGACTTTCTTCTCCAAGAACACGACCTCGAGAT 1255
||||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||||.|||||||||||
Sbjct 1181 GCCGATCCTTAGAAAGAAAACGGAGAGAACCAGAGAGGAGACGACTTTCTTCTCCGAGAACAAGACCTCGAGAT 1254
Query 1256 GATATCCTCAGTAGACGTGAAAGATCAAAAGATGCCAGCCCCATCAATAGATGGTCTCCAACCCGAAGAAGAAG 1329
||||||||..|||||.|||||.|.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1255 GATATCCTTGGTAGATGTGAACGGTCAAAAGATGCCAGCCCCATCAATAGGTGGTCTCCAACCCGAAGAAGAAG 1328
Query 1330 TAGATCTCCCATTAGAAGGAGGTCTCGTTCCCCACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTA 1403
|||.|||||.||||||||||||||.|||||||||.|.|||||.|||||||||||.||||||||||||||.|||.
Sbjct 1329 TAGGTCTCCAATTAGAAGGAGGTCCCGTTCCCCATTGAGACGCAGCAGGTCTCCTAGAAGAAGAAGCAGGTCTC 1402
Query 1404 CTCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCACGCTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGA 1477
||||||||||.||.||..|.||.||||||||.|||||||||.|.||..|||||||||||||.|||||||.|||.
Sbjct 1403 CTCGGAGAAGAGATAGGAGCCGAAGGAGCAGGTCACGCTTGAGGAGAAGGTCTCGATCACGGGGTGGTCATAGG 1476
Query 1478 CGAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAGTCTTTCTGAAGGAATGAAAGTTGAGCAGGA 1551
.||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.||
Sbjct 1477 AGAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAGTCTCTCAGAAGGAATGAAAGTTGAGCAAGA 1550
Query 1552 ATCTTCGTCTGATGATAACCTTGAAGACTTTGATGTAGAGGAAGAAGATGAAGAAGCCCTAATAGAACAGAGAA 1625
.|||||.||||||||||||||||||||.||||||||.|||||.|||||||||||.||.||||||||||||||||
Sbjct 1551 GTCTTCATCTGATGATAACCTTGAAGATTTTGATGTGGAGGAGGAAGATGAAGAGGCTCTAATAGAACAGAGAA 1624
Query 1626 GAATCCAAAGGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCAACATGTCTGTGCCATCTGAA 1699
||||.||.|||||.||||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.
Sbjct 1625 GAATACAGAGGCAAGCAATTGTGCAGAAATATAAATATCTTGCTGAAGATAGCAATATATCTGTGCCATCTGAG 1698
Query 1700 CCAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTGGAGCGAGTAGCTGCTGA 1773
||||||||||||||||||||.||.|||.|||||||.||.||.|||||.|||||..||||||||||.||||||||
Sbjct 1699 CCAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCAGACGACATCTTGGAGCGAGTTGCTGCTGA 1772
Query 1774 TGTTAAAGAGTATGAACGGGAAAATGTTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCTAATGACAG 1847
|||.|||||.|||||.|||||.||||||||.||.||||||||||||||.|||||||||||||||||||||||||
Sbjct 1773 TGTAAAAGAATATGAGCGGGAGAATGTTGACACCTTTGAGGCCTCAGTAAAAGCCAAGCATAATCTAATGACAG 1846
Query 1848 TTGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGTTT 1921
||||||||||||||| || .|
Sbjct 1847 TTGAACAGAATAATG--TC-----------------------------------------------------CT 1865
Query 1922 GCTGCGTATTTTGATAGTGCTCGTCTTCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAG 1995
||||||||||| || || ||||
Sbjct 1866 GCTGCGTATTT--AT----------TT-----------CATT-------------------------------- 1884
Query 1996 AGATAACTGGACCGATGCAGAAGGCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGT 2069
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2070 ATGGCTACACTGGGCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTG 2143
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2144 GCTGTAAAGATCATCAGAAACAATGAGCTCATGCAAAAGACTGGTTTAAAAGAATTAGAGTTCTTGAAAAAACT 2217
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2218 TAATGATGCTGATCCTGATGACAAAATTCATTGTCTGAGATCTTCAGGCACTCTATCACCAGCAGCATCTTGTC 2291
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2292 TGGTATTCGAGCCTCTCAGCATGAACTTACGAGAGGTGTAAAAAAATATGTNAAAGATGTTGGTCTTCATATTA 2365
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2366 AGNCTGTAAGATCCTATAGTCAGCAGTTGTTCCTGGCATTGAAACTCCTTAAAAGATGCAATATCNTACATGCA 2439
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2440 GATATCAAGCCAGACAATATCCTGGTTAATGAATCCAAAACTATTTTAAAGCTTTGCGATTTTGGGTCGGCTTC 2513
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2514 ACATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAGATTTTATCGTGCTCCTGAAATCATTATAGGTA 2587
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2588 AAAGCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTATACGAACTCTATACTGGAAAAATTTTA 2661
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2662 TTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCAATGGATCTCAAAGGAAAGATGCCAAATAAGATGAT 2735
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2736 TCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAGTTGATAAAGTAA 2809
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2810 CAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGGTGC 2883
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2884 CAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTGGA 2957
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2958 CCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCACGCCTTCATCCAGGAAAAAATT 3018
Sbjct 1885 ------------------------------------------------------------- 1884