Nucleotide Global Alignment

Description

• Query: TRCN0000470691
• Subject: XM_006720527.3
• Aligned Length: 1399
• Identities: 728
• Gaps: 662

Alignment

Query    1  ATGGACGGAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTCACGCGCCGCGGCCGATCCCCCCGGTTCACCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCTGAACCACGGGCCGCCGCTCCACGCCACACAGCACTACGGCGCGCACGCCCCGCACCCCAATGTCATGCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCAGTATGGGATCCGCTGTCAACGACGCCTTGAAGCGGGACAAGGACGCGATCTATGGGCACCCGTTGTTTCCT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTGTTAGCTCTGGTCTTTGAGAAGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCTGGAGTGGCTGGCGGAGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CGTCTGCTCCTCCGACTCCTTCAACGAGGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAAGCCACTTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TTTCCTCAAATCCAGAGCTGGACAATTTGATGATACAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTA  444
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  -----------------------------ATGATACAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTA  45

Query  445  GAAAAGGTCCACGAACTGTGCGATAACTTCTGCCACCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   46  GAAAAGGTCCACGAACTGTGCGATAACTTCTGCCACCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGA  119

Query  519  CCTCGTCATTGATGAAAGAGACGGCAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  120  CCTCGTCATTGATGAAAGAGACGGCAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCG  193

Query  593  CTGACCATAACCCTTCTTCTTGGCGAGACCACGATGATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  194  CTGACCATAACCCTTCTTCTTGGCGAGACCACGATGATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCC  267

Query  667  TCCAGTGGGGGCCATGCTTCCCAGAGCGGAGACAACAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  268  TCCAGTGGGGGCCATGCTTCCCAGAGCGGAGACAACAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGC  341

Query  741  TTCACCTGGTACAGGTGACGATGATGATCCGGATAAGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  342  TTCACCTGGTACAGGTGACGATGATGATCCGGATAAGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCA  415

Query  815  AAGTAGCAACAAATATCATGAGAGCATGGCTCTTCCAGCATCTCACACATCCGTACCCTTCCGAAGAGCAGAAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  416  AAGTAGCAACAAATATCATGAGAGCATGGCTCTTCCAGCATCTCACACATCCGTACCCTTCCGAAGAGCAGAAG  489

Query  889  AAACAGTTAGCGCAAGACACAGGACTTACAATTCTCCAAGTAAACAACTGGTTTATTAATGCCAGAAGAAGAAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  490  AAACAGTTAGCGCAAGACACAGGACTTACAATTCTCCAAGTAAACAACTGGTTTATTAATGCCAGAAGAAGAAT  563

Query  963  AGTACAGCCCATGATTGACCAGTCAAATCGAG---------------------CAGTGAGCCAAGGAGCAGCAT  1015
            ||||||||||||||||||||||||||||||||                     |||||||||||||||||||||
Sbjct  564  AGTACAGCCCATGATTGACCAGTCAAATCGAGCAGGTTTTCTTCTTGATCCTTCAGTGAGCCAAGGAGCAGCAT  637

Query 1016  ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTTGGATGGTCAGCAACACATGGGGATCCGGCCTGCAG--  1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct  638  ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTTGGATGGTCAGCAACACATGGGGATCCGGCCTGCAGGT  711

Query 1088  -----GACCTATG--AGTGGA----------------------ATGGGCATGAATATGG-GCATGGATGGGCAA  1131
                 ||.| |||  ||.|||                      |||||.||||.||||| .||      |.|||
Sbjct  712  TTGCAGAGC-ATGCCAGGGGACTACGTTTCTCAGGGTGGTCCTATGGGAATGAGTATGGCACA------GCCAA  778

Query 1132  -TGGCACT-------ACATG------------------------------------------------------  1143
             |..||||       |.|||                                                      
Sbjct  779  GTTACACTCCTCCCCAGATGACCCCACACCCTACTCAATTAAGACATGGACCCCCAATGCATTCATATTTGCCA  852

Query 1144  --------------------------------------------------------------------------  1143
                                                                                      
Sbjct  853  AGCCATCCCCACCACCCAGCCATGATGATGCACGGAGGACCCCCTACCCACCCTGGAATGACTATGTCAGCACA  926

Query 1144  -------------------------------------------------------------------  1143
                                                                               
Sbjct  927  GAGCCCCACAATGTTAAATTCTGTAGATCCCAATGTTGGCGGACAGGTTATGGACATTCATGCCCAA  993