Nucleotide Global Alignment
Description
- Query:
- TRCN0000470691
- Subject:
- XR_002957641.1
- Aligned Length:
- 3044
- Identities:
- 1066
- Gaps:
- 1978
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCGGACCCAGATGACTGCCTCCTCACTTCCTCCCTCCCGATTCCGCCGCGGCCCCCAAAGACTCTCGGGGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCTTGTCCGCACCGCTTGGAGGGAGTGTGCTCTGAGTTAAGCTGGTCTCTTCTGGTCCTGGAAAAAAATGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATTGACAAGGTTGCTGGATCTGCGCAGAAAAGAAAGTGCCACTTAATAAAAAATTTAGCCCGGCAGTGGTACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCTGCAGAGCTTGCTGCCCTTGGACGTTAGCAGGAAGCCTTCGGGGTGCTGTAATCGGCGGGCAGAGGAGAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGCCGCGGAATTAAAAGGAACAAAAGCTAGAGCGCCATGCCAAACGTCCCCGGCAAGACCCAGTTAGGCAGG 370
Query 1 ---------------------------------------------------------ATGGACGGAGTAGGGGT 17
|||||||||||||||||
Sbjct 371 AGCCGGGAGTGATGGGAAAATGAACTAGAATACGATGAGCTGCCCCATTACGGCGGGATGGACGGAGTAGGGGT 444
Query 18 TCCCGCTTCCATGTACGGAGACCCTCACGCGCCGCGGCCGATCCCCCCGGTTCACCACCTGAACCACGGGCCGC 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCCCGCTTCCATGTACGGAGACCCTCACGCGCCGCGGCCGATCCCCCCGGTTCACCACCTGAACCACGGGCCGC 518
Query 92 CGCTCCACGCCACACAGCACTACGGCGCGCACGCCCCGCACCCCAATGTCATGCCGGCCAGTATGGGATCCGCT 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGCTCCACGCCACACAGCACTACGGCGCGCACGCCCCGCACCCCAATGTCATGCCGGCCAGTATGGGATCCGCT 592
Query 166 GTCAACGACGCCTTGAAGCGGGACAAGGACGCGATCTATGGGCACCCGTTGTTTCCTCTGTTAGCTCTGGTCTT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTCAACGACGCCTTGAAGCGGGACAAGGACGCGATCTATGGGCACCCGTTGTTTCCTCTGTTAGCTCTGGTCTT 666
Query 240 TGAGAAGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCTGGAGTGGCTGGCGGAGACGTCTGCTCCTCCGACT 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGAGAAGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCTGGAGTGGCTGGCGGAGACGTCTGCTCCTCCGACT 740
Query 314 CCTTCAACGAGGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAAGCCACTTTTTTCCTCAAATCCAGAG 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTTCAACGAGGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAAGCCACTTTTTTCCTCAAATCCAGAG 814
Query 388 CTGGACAATTTGATGATACAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAACT 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGGACAATTTGATGATACAAGCAATACAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAACT 888
Query 462 GTGCGATAACTTCTGCCACCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAAA 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTGCGATAACTTCTGCCACCGATACATTAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAAA 962
Query 536 GAGACGGCAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTCT 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAGACGGCAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTCT 1036
Query 610 TCTTGGCGAGACCACGATGATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATGC 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTTGGCGAGACCACGATGATGCAACCTCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATGC 1110
Query 684 TTCCCAGAGCGGAGACAACAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGTG 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTCCCAGAGCGGAGACAACAGCAGTGAGCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGTG 1184
Query 758 ACGATGATGATCCGGATAAGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATATC 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACGATGATGATCCGGATAAGGACAAAAAACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATATC 1258
Query 832 ATGAGAGCATGGCTCTTCCAGCATCTCACACATCCGTACCCTTCCGAAGAGCAGAAGAAACAGTTAGCGCAAGA 905
||||||||||||||||||||||||||||||
Sbjct 1259 ATGAGAGCATGGCTCTTCCAGCATCTCACA-------------------------------------------- 1288
Query 906 CACAGGACTTACAATTCTCCAAGTAAACAACTGGTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATTG 979
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1289 ---------------------------------GTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATTG 1329
Query 980 ACCAGTCAAATCGAGCAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTTG 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 ACCAGTCAAATCGAGCAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTTG 1403
Query 1054 GATGGTCAGCAACACATGGGGATCCGGCCTGCAGGACCTATGAGTGGAATGGGCATGAATATGGGCATGGATGG 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 GATGGTCAGCAACACATGGGGATCCGGCCTGCAGGACCTATGAGTGGAATGGGCATGAATATGGGCATGGATGG 1477
Query 1128 GCAATGGCACTACATG---------------------------------------------------------- 1143
||||||||||||||||
Sbjct 1478 GCAATGGCACTACATGTAACCTTCATCATGTAAAGCAATCGCAAAGCAAGGGGGAAGTTTGCAGAGCATGCCAG 1551
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1552 GGGACTACGTTTCTCAGGGTGGTCCTATGGGAATGAGTATGGCACAGCCAAGTTACACTCCTCCCCAGATGACC 1625
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1626 CCACACCCTACTCAATTAAGACATGGACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCAT 1699
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1700 GATGATGCACGGAGGACCCCCTACCCACCCTGGAATGACTATGTCAGCACAGAGCCCCACAATGTTAAATTCTG 1773
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1774 TAGATCCCAATGTTGGCGGACAGGTTATGGACATTCATGCCCAATAGTATAAGGGAACTCAAGGGAAAAGGAAA 1847
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1848 CACACGCAAAAACTATTTTAAGACTTTCTGAACTTTGACCAGATGTTGACACTTAATATGAAATTCCAGACAGC 1921
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1922 TGTGATTATTTTTTACTTTTGTCATTTTTCATCAAGCAACAGAGGACCAATGCAACAAGAACACAAATGTGAAA 1995
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 1996 TCATGGGCTGACTGAGACAATTCTGTCCATGTAAAGATCCTCTGGAAAAAGACTCCGAGAGTTATAACTACTGT 2069
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2070 AGTATAAATATAGGAACTAAGTTAAACTTGTACATTTCTGTTGATCACGCCGTTATGTTGCCTCAAATAGTTTT 2143
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2144 AGAAGAGAAAAAAAAATATATCCTTGTTTTCCACACTATGTGTGTTGTTCCCAAAAGAATGACTGTTTTGGTTC 2217
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2218 ATCAGTGAATTCACCATCCAGGAGAGACTGTGGTATATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCAC 2291
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2292 ACTGGAGATCATGATGAACTTTTGGCTGAACCTCATCACTCGAACTCCAGCTTCAAGAATGTGTTTTCATGCCC 2365
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2366 GGCCTTTGTTCCTCCATAAATGTGTCCTTTAGTTTCAAACAGATCTTTATAGTTCGTGCTTCATAAGCCAATTC 2439
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2440 TTATTATTATTTTTGGGGGACTCTTCTTCAAAGAGCTTGCCAATGAAGATTTAAAGACAGAGCAGGAGCTTCTT 2513
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2514 CCAGGAGTTCTGAGCCTTGGTTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACACAAAAAAAAGTT 2587
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2588 ATTAATGGTCATTGAACCATAACTAGGACTTTATCAGAAACTCAAAGCTTGGGGGATAAAAAGGAGCAAGAGAA 2661
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2662 TACTGTAACAAACTTCGTACAGAGTTCGGTCTATTAATTGTTTCATGTTAGATATTCTATGTGTTTACCTCAAT 2735
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2736 TGAAAAAAAAAAGAATGTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGAATTCTTCT 2809
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2810 TTTCTCAGCACGTGTTCCTCACTAGAAGAAAATGCTGTTACCTTTAAGCTTTGTCAAATTTACATTAAAATACT 2883
Query 1144 -------------------------------------------------------------------------- 1143
Sbjct 2884 TGTATGAGGACTGTGACGTTATGTTAAAAAAAAAAAGGTGTTAAGTCACAAAAAGCGGTAATAAATATTTCATT 2957
Query 1144 ---------- 1143
Sbjct 2958 TTTGATTTTT 2967
