Nucleotide Global Alignment
Description
- Query:
- TRCN0000470790
- Subject:
- NM_007299.4
- Aligned Length:
- 4194
- Identities:
- 1833
- Gaps:
- 2229
Alignment
Query 1 ATGATAAATCAGGGAACTAACCAAACGGAGCAGAATGGTCAAGTGATGAATATTACTAATAGTGGTCATGAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TAAAACAAAAGGTGATTCTATTCAGAATGAGAAAAATCCTAACCCAATAGAATCACTCGAAAAAGAATCTGCTT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCAAAACGAAAGCTGAACCTATAAGCAGCAGTATAAGCAATATGGAACTCGAATTAAATATCCACAATTCAAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCATATTCATGCGCTTGAACTAGTAGTCAGTAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATCTAAGCCCACCTAATTGTACTGAATTGCAAATTGATAGTTGTTCTAGCAGTGAAGAGATAAAGAAAAAAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGTACAACCAAATGCCAGTCAGGCACAGCAGAAACCTACAACTCATGGAAGGTAAAGAACCTGCAACTGGAGCC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGTGATACTTTCCCAGAGCTGAAGTTAAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAATGCACCTGGTTCTTTTACTAAGTGTCCAAATACCAGTGAACTTAAAGAATTTGTCAATCCTAGCCTTCCAA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GAGAAGAAAAAGAAGAGAAACTAGAAACAGTTAAAGTGTCTAATAATGCTGAAGACCCCAAAGATCTCATGTTA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCACTGGTACCTGGTACTGATTA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGGCACTCAGGAAAGTATCTCGTTACTGGAAGTTAGCACTCTAGGGAAGGCAAAAACAGAACCAAATAAATGTG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TGAGTCAGTGTGCAGCATTTGAAAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGATAATAGAAATGACACA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GAAGGCTTTAAGTATCCATTGGGACATGAAGTTAACCACAGTCGGGAAACAAGCATAGAAATGGAAGAAAGTGA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 ACTCGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCTGTTTTCAAATCCAG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 GAAATGCAGAAGAGGAATGTGCAACATTCTCTGCCCACTCTGGGTCCTTAAAGAAACAAAGTCCAAAAGTCACT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 TTTGAATGTGAACAAAAGGAAGAAAATCAAGGAAAGAATGAGTCTAATATCAAGCCTGTACAGACAGTTAATAT 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAATGTAGTATCAAAGGAGGCT 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CTAGGTTTTGTCTATCATCTCAGTTCAGAGGCAACGAAACTGGACTCATTACTCCAAATAAACATGGACTTTTA 1332
||||| ||||
Sbjct 1 ---------------------------------------------------------------ATGGA--TTTA 9
Query 1333 CAAAACCCATATCGTATACCACCACTTTTTCCCATCAAGTCATTTGTTAAA-----ACTAAATGTAAGAAAAAT 1401
|.|.| |.|||.| |||.|| ||.||||||.|..||
Sbjct 10 --------------TCTGC-------TCTTCGC------------GTTGAAGAAGTACAAAATGTCATTAA--- 47
Query 1402 CTGCTA--GAGGAAAACTTTGAGGAACATTCAATGTCACCTGAAAGAGAAATG---GGAAATGA-----GAACA 1465
||||| .||.|||.|||.||| ||||.| |..|| |||..||| ||||.
Sbjct 48 -TGCTATGCAGAAAATCTTAGAG----------TGTCCC---------ATCTGTCTGGAGTTGATCAAGGAACC 101
Query 1466 T---TCC---AAGTACAGTGAGCACAATTAGCCGTAATAACATTAGAGAAAATGTTTTTAAAGGAGCCAGCTCA 1533
| ||| |||| ||||.||| ||.||||
Sbjct 102 TGTCTCCACAAAGT---GTGACCAC--------------------------ATATTTT---------------- 130
Query 1534 AGCAATATTAATGAAGTAGGTTCCAGTACTAATGAAGTGGGCTCCAGTATTAATGAAATAGGTTCCAGTGATGA 1607
|||| ||| ||.|| ||.||
Sbjct 131 -GCAA-ATT-----------TTGCA-------------------------------------------TGCTG- 147
Query 1608 AAACAT-TCAAGCAGAACTAGGTAGAAACAGAGGGCCAAAATTGAATGCTATGCTTAGATTAGGGGTTTTGCAA 1680
||||.| ||||.|||| |||| |||||| ||
Sbjct 148 AAACTTCTCAACCAGA-------AGAA----AGGGCC----TT------------------------------- 175
Query 1681 CCTGAGGTCTATAAACAAAGTCTTCCTGGAAGTAATTGTAAGCATCCTGAAATAA--AAAAG-------CAAGA 1745
||.||| .||||..| ||||||.| |||.|||| ||||| |||||
Sbjct 176 ---------------CACAGT-GTCCTTTA------TGTAAGAA---TGATATAACCAAAAGGAGCCTACAAGA 224
Query 1746 ATATGAAGAAGTAGTTCAGACTGTTAATAC-AGATTTCTCTCCATATCTGATTTCAGATAACT--TAGAACAGC 1816
| |.||| |||||| ||..|||| |.|||.||
Sbjct 225 A------------------------AGTACGAGATTT------------------AGTCAACTTGTTGAAGAG- 255
Query 1817 CTATGGGAAGT-AGTCATGCATCTCAGGTTTGTTCTGAGACACCTGATGACCTGTTAGATGATGGTGAAATAAA 1889
||||.|.||.| |.|..|||.|.||||.|| |||||..| .||.||..||| .|||
Sbjct 256 CTATTGAAAATCATTTGTGCTTTTCAGCTT--------GACACAGG-------TTTGGAGTATG--CAAA---- 308
Query 1890 GGAAGATACTAGTTTTGCTGAAAATGACATTAAGGAAAGT---TCTGCTGTTTTTAGCA---AAAGCGTCCAGA 1957
.||.|| ||.|||||| |||| |||||||.| |||.||| |.|| ||| |
Sbjct 309 --CAGCTA-TAATTTTGC--AAAA-------AAGGAAAATAACTCTCCTG-----AACATCTAAA--------A 357
Query 1958 GAGGAGAGCTTAGCAGGAGTCCTAGCCCTTTCACCCATACACATTTGGCTCAGGGTTACCGAAGAGGGGCCAAG 2031
||.|| ||.|| ||.|||.|||.| .|..|||.|||.|||...|.|||||
Sbjct 358 GATGA-AGTTT----------------CTATCATCCAAA---------GTATGGGCTACAGAAACCGTGCCAA- 404
Query 2032 AAATTAGAGTCCTCAGAAGAGAACTTATCTAGTGAGGATGAAGAGCTTCCC-----TGCTTCCAACACTTGTTA 2100
||| ||| ||||..||| |||| ||| |.|||| ||||
Sbjct 405 ----------------AAG---ACT--TCTACAGAG--TGAA------CCCGAAAATCCTTC-----CTTG--- 441
Query 2101 TTTGGTAAAGTAAACAATATACCTTCTCAG--------TCTACTAGGCATAGCACCGTTGCTACCGAGTGTCTG 2166
.||.|||| |..|||||| ||| ||| ||| |||..||
Sbjct 442 -------CAGGAAAC------CAGTCTCAGTGTCCAACTCT-CTA--------ACC-TTGGAAC---------- 482
Query 2167 TCTAAGAACACAGAGGAGAATTTATTATCATTGAAGAATAGCTTAAATGACTGCAGT-AACCAGGTAATATTGG 2239
|.|.|||||.|.|||||.|| |.||..|.|.|..|.||.|||.|||..|.|| .|| ||||
Sbjct 483 TGTGAGAACTCTGAGGACAA------AGCAGCGGATACAACCTCAAAAGACGTCTGTCTAC--------ATTG- 541
Query 2240 CAAA--GGCATCTCA------GGAACATCACC-TTAGTGAGGAAACAAAATGTTCTGCTAGCTTGTTTTCTTCA 2304
|| ||.||||.| .|||.|| ||| |||.|.|||.||| ||
Sbjct 542 --AATTGGGATCTGATTCTTCTGAAGAT-ACCGTTAATAAGGCAAC------TT-------------------- 586
Query 2305 CAGTGCAGTGAATTGG------AAGACTTGACTGCAAATACAAA-CACCC----AGGATCCTTTCTTGATTGGT 2367
|.||||||| ||| ||||.||| .|||||| ||||| ||||.||
Sbjct 587 -ATTGCAGTG---TGGGAGATCAAGAATTG-------TTACAAATCACCCCTCAAGGAACC------------- 636
Query 2368 TCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGG---TCTG--AGTGACAAG---------GAA 2427
|||.| |||||.| ||||.| |||| | |.||| |||
Sbjct 637 ---------------AGGGA------TGAAATC-----AGTTTGGATTCTGCAA---AAAAGGCTGCTTGTGAA 681
Query 2428 TTGGTTTCAGA---TGATG-AAGAAAGAGGAACGGGCTTGGAAGAAAATAATCAA-----------------GA 2480
| ||||.|| .|||| ||.|||.| || |||.||.||||| ||
Sbjct 682 T---TTTCTGAGACGGATGTAACAAATA--------CT-----GAACATCATCAACCCAGTAATAATGATTTGA 739
Query 2481 AGAGCA-----AAGCATG-------GATTC------AAACTTA----GGTGAAGCAGCATCTGGGTGTGAGAGT 2532
|.|.|| ||||.|| ||..| |||..|| |||||||||||||||||||||||||||
Sbjct 740 ACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGTGAAGCAGCATCTGGGTGTGAGAGT 813
Query 2533 GAAACAAGCGTCTCTGAAGACTGCTCAGGGCTATCCTCTCAGAGTGACATTTTAACCACTCAGCAGAGGGATAC 2606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 GAAACAAGCGTCTCTGAAGACTGCTCAGGGCTATCCTCTCAGAGTGACATTTTAACCACTCAGCAGAGGGATAC 887
Query 2607 CATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCATGGGAGCC 2680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 CATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCATGGGAGCC 961
Query 2681 AGCCTTCTAACAGCTACCCTTCCATCATAAGTGACTCCTCTGCCCTTGAGGACCTGCGAAATCCAGAACAAAGC 2754
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 962 AGCCTTCTAACAGCTACCCTTCCATCATAAGTGACTCTTCTGCCCTTGAGGACCTGCGAAATCCAGAACAAAGC 1035
Query 2755 ACATCAGAAAAAGATTCGCATATACATGGCCAAAGGGACAACTCCATGTTTTCTAAAAGGCCTAGAGAACATAT 2828
|||||||||||
Sbjct 1036 ACATCAGAAAA--------------------------------------------------------------- 1046
Query 2829 ATCAGTATTAACTTCACAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGT 2902
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 ---AGTATTAACTTCACAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGT 1117
Query 2903 TTGAGGTGTCTGCAGATAGTTCTACCAGTAAAAATAAAGAACCAGGAGTGGAAAGGTCATCCCCTTCTAAATGC 2976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 TTGAGGTGTCTGCAGATAGTTCTACCAGTAAAAATAAAGAACCAGGAGTGGAAAGGTCATCCCCTTCTAAATGC 1191
Query 2977 CCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGA 3050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 CCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGA 1265
Query 3051 GGGGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAAACAT 3124
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 GGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAAACAT 1339
Query 3125 CTTACTTGCCAAGGCAAGATCTAGAGGGAACCCCTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATGACCCT 3198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340 CTTACTTGCCAAGGCAAGATCTAGAGGGAACCCCTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATGACCCT 1413
Query 3199 GAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCTGCATT 3272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 GAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCTGCATT 1487
Query 3273 GAAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGGGTCCAGCTGCTGCTCATACTACTGATACTGCTGGGT 3346
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1488 GAAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACTGATACTGCTGGGT 1561
Query 3347 ATAATGCAATGGAAGAAAGTGTGAGCAGGGAGAAGCCAGAATTGACAGCTTCAACAGAAAGGGTCAACAAAAGA 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1562 ATAATGCAATGGAAGAAAGTGTGAGCAGGGAGAAGCCAGAATTGACAGCTTCAACAGAAAGGGTCAACAAAAGA 1635
Query 3421 ATGTCCATAGTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTCGTGTACAAGTTTGCCAGAAAACACCACAT 3494
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1636 ATGTCCATGGTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTCGTGTACAAGTTTGCCAGAAAACACCACAT 1709
Query 3495 CACTTTAACTAATCTAATTACTGAAGAGACTACTCATGTTGTTATGAAAACAGATGCTGAGTTTGTGTGTGAAC 3568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1710 CACTTTAACTAATCTAATTACTGAAGAGACTACTCATGTTGTTATGAAAACAGATGCTGAGTTTGTGTGTGAAC 1783
Query 3569 GGACACTGAAATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTATTTCTGGGTGACCCAGTCTATT 3642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1784 GGACACTGAAATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTATTTCTGGGTGACCCAGTCTATT 1857
Query 3643 AAAGAAAGAAAAATGCTGAATGAGCATGATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGG 3716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 AAAGAAAGAAAAATGCTGAATGAGCATGATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGG 1931
Query 3717 TCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCTGTTGCTATGGGCCCTTCA 3790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1932 TCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCTGTTGCTATGGGCCCTTCA 2005
Query 3791 CCAACATGCCCACAGATCAACTGGAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGTGAAGGAGCTTTCATCA 3864
|||||||||||||||
Sbjct 2006 CCAACATGCCCACAG----------------------------------------------------------- 2020
Query 3865 TTCACCCTTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTTCCA 3938
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2021 ---------------GGTGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTTCCA 2079
Query 3939 TGCAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGT 4012
||||||||||||||||||
Sbjct 2080 TGCAATTGGGCAGATGTG-------------------------------------------------------- 2097
Query 4013 GCCAGGAGCTGGACACCTACCTGATACCCCAGATCCCCCACAGCCACTAC 4062
Sbjct 2098 -------------------------------------------------- 2097
