Nucleotide Global Alignment

Description

Query:
TRCN0000470799
Subject:
NR_110133.1
Aligned Length:
2254
Identities:
693
Gaps:
1516

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGATGTGTGGAGCTTACGGAATGTGGAGCCCATTTATTTTGCATGCACATTTAATGTGAAAAATTATTTTTAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCTAAAGCAACCTCTCGGAAATGCTAAGAACTGCAAAGCTACGCAGACCCTGATGCATTCCTAAATATAATGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGAAAAAACAGAAATGCACCAAGAATTGAAAACCCTGGTTACTCACGATTCTTTTCACCTTTCCACCTTGACCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCTTTCGTTCTGTCCGAGACACCCACAGGAGAAGTTATCTCAGCCATCGAGAGCAGCAGCATCAGTAACAGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGCCATGCCAGACTCAGCAATTCTGCTCTTAGAAGTTTTACCCAAGAGAAAAGGAAAACACATGCCCACATGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGAGTGTTTATATCAGCTTTATTCATAATCACCTCCACCTGGTAACAACCAATTGTCCACCGAATGAGACAAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCTAGCTCTGTTGCCCAGACTGGACTACAGTGGTGTGATTATAGCTCACATCCTCACATCAGACTTGCACTCCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGACTCAAGCAATCCTTCTGCCTCAGCCTAAAGAGTAGCTGGCTACAGGTGTGCACCACCAGACCCACCTAATT  592

Query    1  -----------------------------------------------ATGGCCATACTGCCCAAGGTAATTTAT  27
                                                           .||||||||||||||||||||||||||
Sbjct  593  AAAACAAGGTTCCATGTTCATGGGTAGGAAGAATCAGTATCGTGAAATTGGCCATACTGCCCAAGGTAATTTAT  666

Query   28  AGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCAT  101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCAT  740

Query  102  ATGGAACCAAAAAAGAGCCTGCATCACCAAGTCAATCCTAAGGCAAAAGAAAAAAGCTGGAGGCATCACACTAC  175
            .||||.|||||||||||||..|||..|||||.|||.||||||.||||||||.|||||||||||||||||.|||.
Sbjct  741  GTGGATCCAAAAAAGAGCCCACATTGCCAAGACAACCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTAT  814

Query  176  CTGACTTCAAACTATACTACACGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGAT  249
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  815  CTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGAC  888

Query  250  CAATGGAACAGAACAGAGCCCTCAGAAA-TAATGCCGCATATCTACAACTATCTGATCTTTGACAAAC------  316
            |||||||||||||||||||.|||||||| ||||.|.|||.|||||||||.|||||||||||||.||||      
Sbjct  889  CAATGGAACAGAACAGAGCTCTCAGAAATTAATACTGCACATCTACAACCATCTGATCTTTGAAAAACAACCAT  962

Query  317  -------CTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGC  383
                   .|||||||||||||.|.|||||||||||||||||||.||||||||.|||||||||||||||||||||
Sbjct  963  CTGATCTTTGACAAAAACAAGAACTGGGGAAAGGATTCCCTATTTAATAAATCGTGCTGGGAAAACTGGCTAGC  1036

Query  384  CATATGTAAAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGGTGGATTAAAGACT  457
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||
Sbjct 1037  CATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGCATTAAAGACT  1110

Query  458  TAAACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTTGGCATTACCATTCAGGACATAGGAATGGGC  531
            ||||..|||||||||||||.|||||||||||||||||||||||.||||.|||.||||||||||||||.||||||
Sbjct 1111  TAAATGTTAGACCTAAAACAATAAAAACCCTAGAAGAAAACCTAGGCAATACTATTCAGGACATAGGCATGGGC  1184

Query  532  AAGCACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACT  605
            |||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||
Sbjct 1185  AAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAGCAAAAGCCAAAATTGACAAATGGGATCTATTTAAACT  1258

Query  606  AAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTCA  679
            |||||||||||||||||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||..
Sbjct 1259  AAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAATGAACAGGCAACCTACAGAATGGGAGAAAATTTTTG  1332

Query  680  CAACCTACTCATCTGACAAAGGGCTAATATCCAGAATTTACAATGAACTCAAACAAATT---------------  738
            |||.|||||||||||||||||||||||||||||||||||||||.|||||||||||||||               
Sbjct 1333  CAATCTACTCATCTGACAAAGGGCTAATATCCAGAATTTACAAAGAACTCAAACAAATTCACAAGAAAAAAGTA  1406

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1407  AACAACACCTTCAAAAAGTGGGTGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAACAG  1480

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1481  ACACATGAAAAAATGCTCAACATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCA  1554

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1555  CACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAGTGCCGGAGAGGATGTGGAGAAATAGGAACACTTT  1628

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1629  TACACTGTTGGTGGGACTGTAAACTAATTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAT  1702

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1703  CTATTAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTAGAAATCATGCTGCTGTAA  1776

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1777  AGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAT  1850

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1851  CAATGATAGACTGGATTAAAAAAATATGGCACATATACACCATGGAATACTATGTAGCCATAAAAAATGATGAG  1924

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1925  TTCATATCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAAC  1998

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 1999  CAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTGGACACAGGAAGGGGAACATCA  2072

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 2073  CATACCAGGGCCTGTCGTGGGGTTGGGGGAGGAGGGAGGGATAGCATTAGGAAATATACCTAATATAAATGACC  2146

Query  739  --------------------------------------------------------------------------  738
                                                                                      
Sbjct 2147  AATTAATGGGTGCAGCACACCAACATGACACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACC  2220

Query  739  ----------------------------------  738
                                              
Sbjct 2221  CTAGAACTTAAAGTATAATAAAAAATAAATAAAT  2254

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