Nucleotide Global Alignment
Description
- Query:
- TRCN0000470806
- Subject:
- XM_011514768.1
- Aligned Length:
- 2041
- Identities:
- 835
- Gaps:
- 1169
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCAGCCTGAGGACATGGCGTCGCTGAGCGAGTTCGACTCCTTGGCGGGCAGCATCCCGGCCACCAAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGATCACCGTGTCCTGCAGGAACCTCCTGGACAAAGACATGTTTTCCAAGTCCGACCCACTGTGCGTCATGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATACCCAAGGGATGGAGAACAAGCAGTGGCGGGAGTTTGGGCGCACCGAAGTCATCGACAACACGCTCAATCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACTTCGTGCGCAAGTTCATTGTGGATTACTTTTTCGAGGAGAAGCAGAACCTCCGTTTTGATCTATACGACGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACTCTAAGAGTCCTGATTTATCCAAACACGATTTCCTGGGCCAGGCCTTCTGCACCCTTGGAGAGATTGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGTCCCCTGGGAGCCGCCTGGAAAAGCCCCTCACGATAGGCGCATTCAGCCTGAATTCCAGGACGGGCAAACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCCAGCTGTGTCCAACGGAAGTGGTCTTTGGATGGAAAGTTTGAGAACCACTGGTCTGGAAGCCTCCGGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTCCCAGGAAAGAAATGTGGCACCATCATCCTGTCCGCTGAGGAGCTCAGCAACTGTAGGGATGTCGCCACCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCAGTTCTGTGCCAACAAGCTGGACAAGAAAGATTTCTTTGGGAAATCTGACCCCTTCTTGGTATTCTACAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCAACGAGGATGGAACGTTCACCATTTGCCACAAGACCGAGGTCATGAAGAACACCCTAAATCCAGTCTGGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACTTTCTCCATTCCCGTGAGAGCCCTCTGCAACGGCGACTACGATCGGACCATCAAGGTGGAGGTGTACGACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGATCGGGACGGCAGCCATGACTTCATTGGGGAGTTCACCACCAGTTACCGGGAGCTGGCCCGTGGGCAGAGC 888
Query 1 ---------------------------------------ATGAAGAAAAAGAAATACGTGAATTCTGGCACAGT 35
|||||||||||||||||||||||||||||||||||
Sbjct 889 CAATTCAACATCTATGAGGTGGTAAACCCGAAAAAGAAAATGAAGAAAAAGAAATACGTGAATTCTGGCACAGT 962
Query 36 CACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAACT 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAACT 1036
Query 110 TCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCCC 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCCC 1110
Query 184 TACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGAT 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGAT 1184
Query 258 GTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCA 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCA 1258
Query 332 ACCAGGAGAACCCCTCATGCTGCGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAG 405
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACCAGGAGAACCCCTCATGCTGTGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAG 1332
Query 406 CTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTC 1406
Query 480 CCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTCA 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTCA 1480
Query 554 ACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTG 1554
Query 628 GATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTCCAG-------------T 688
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .
Sbjct 1555 GATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTCCAGGTGAAGCCCAGGCC 1628
Query 689 TTGTACCCTTCC----GGGA-------------------CTACGTGGACCGCACA-----------GGCAACCA 728
||| |||.|| |||| |.|.|.|||||.|||| |||..|
Sbjct 1629 TTG---CCTGCCCCATGGGAAATTCAAGAGCCCCTCTAGCCAGGCGGACCTCACACCCCCTTTGGGGGCTTC-- 1697
Query 729 CGTGCTGAGCATGGCCC---------GC-CTG---GCCCGAGACGTG---CTGGCA----------------GA 770
|.||.||| |.||||| || ||| ||||.| |.||| |.|.|| ||
Sbjct 1698 CCTGGTGA--AGGGCCCAGAAGGGAGGCACTGGGAGCCCCA-AAGTGGCCCAGCCACCACCGAAGGGAGTAGGA 1768
Query 771 GATC---CCT-GACCAACTGGTGT-----------------CCT-----ACATGAAGGCACAGGG--------- 809
| || ||| |.||| ||.||| ||| |||| |.|||
Sbjct 1769 G-TCAGTCCTCGGCCA--TGCTGTGGTCTGGGCTGGGCCCCCCTCTGTCACAT-------CTGGGACACACTCC 1832
Query 810 ---CATTCGCCCGCGTCCCCCACCCG----CAGCACCAACCCACT---CGCCCTCGCAGTCCCCAGCCCGCACG 873
|||| .||.||.|||..||.| ||| |||||.|| .||||| |||.|||||..|| |
Sbjct 1833 TAACATT---GCGGGTGCCCAGCCAGAGGCCAG----AACCCTCTGCCAGCCCT-----TCCTCAGCCTCCA-G 1893
Query 874 CCCCCTG----------CGTCC-------------CCCCT-----GCACACGCA------------------CA 901
.||.||| |||.| ||||| ||..|.||| ||
Sbjct 1894 GCCTCTGTGGTCAGCCTCGTTCTGGTTTTTTTCTGCCCCTTGAAGGCTGAGGCAGTGTCTTTAGTGTTGCTGCA 1967
Query 902 TC----------------------------------------- 903
.|
Sbjct 1968 GCCTTCTCCAAGAATAGGCATTGCTCGGTTAACTGAATCAATG 2010
