Nucleotide Global Alignment
Description
- Query:
- TRCN0000470806
- Subject:
- XM_011514769.1
- Aligned Length:
- 1990
- Identities:
- 835
- Gaps:
- 1118
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCAGCCTGAGGACATGGCGTCGCTGAGCGAGTTCGACTCCTTGGCGGGCAGCATCCCGGCCACCAAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGATCACCGTGTCCTGCAGGAACCTCCTGGACAAAGACATGTTTTCCAAGTCCGACCCACTGTGCGTCATGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATACCCAAGGGATGGAGAACAAGCAGTGGCGGGAGTTTGGGCGCACCGAAGTCATCGACAACACGCTCAATCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACTTCGTGCGCAAGTTCATTGTGGATTACTTTTTCGAGGAGAAGCAGAACCTCCGTTTTGATCTATACGACGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACTCTAAGAGTCCTGATTTATCCAAACACGATTTCCTGGGCCAGGCCTTCTGCACCCTTGGAGAGATTGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGTCCCCTGGGAGCCGCCTGGAAAAGCCCCTCACGATAGGCGCATTCAGCCTGAATTCCAGGACGGGCAAACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCCAGCTGTGTCCAACGGTGGTGTCCCAGGAAAGAAATGTGGCACCATCATCCTGTCCGCTGAGGAGCTCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAACTGTAGGGATGTCGCCACCATGCAGTTCTGTGCCAACAAGCTGGACAAGAAAGATTTCTTTGGGAAATCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCCCTTCTTGGTATTCTACAGAAGCAACGAGGATGGAACGTTCACCATTTGCCACAAGACCGAGGTCATGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACACCCTAAATCCAGTCTGGCAAACTTTCTCCATTCCCGTGAGAGCCCTCTGCAACGGCGACTACGATCGGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATCAAGGTGGAGGTGTACGACTGGGATCGGGACGGCAGCCATGACTTCATTGGGGAGTTCACCACCAGTTACC 814
Query 1 --------------------------------------------------------------ATGAAGAAAAAG 12
||||||||||||
Sbjct 815 GGGAGCTGGCCCGTGGGCAGAGCCAATTCAACATCTATGAGGTGGTAAACCCGAAAAAGAAAATGAAGAAAAAG 888
Query 13 AAATACGTGAATTCTGGCACAGTCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACAT 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAATACGTGAATTCTGGCACAGTCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACAT 962
Query 87 CAAAGGAGGGACCCAGATCAACTTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCA 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAAAGGAGGGACCCAGATCAACTTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCA 1036
Query 161 CATCCCTGCACTACATGAGCCCCTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATC 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CATCCCTGCACTACATGAGCCCCTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATC 1110
Query 235 CAGCACTACGACAGTGACAAGATGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTC 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGCACTACGACAGTGACAAGATGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTC 1184
Query 309 CCACGAGTTCCCACTGAATGGCAACCAGGAGAACCCCTCATGCTGCGGCATCGACGGCATCCTGGAGGCCTACC 382
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1185 CCACGAGTTCCCACTGAATGGCAACCAGGAGAACCCCTCATGCTGTGGCATCGACGGCATCCTGGAGGCCTACC 1258
Query 383 ACCGCAGCCTGCGCACTGTGCAGCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAAT 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACCGCAGCCTGCGCACTGTGCAGCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAAT 1332
Query 457 GCAGCGGCCGTGCAGGATGGCTCCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGC 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCAGCGGCCGTGCAGGATGGCTCCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGC 1406
Query 531 GCAGACCAAGGAGGCCATTGTCAACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAG 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCAGACCAAGGAGGCCATTGTCAACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAG 1480
Query 605 AGTTCGACGCCATGGTGGAGCTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGAC 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGTTCGACGCCATGGTGGAGCTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGAC 1554
Query 679 ATCGTCCAG-------------TTTGTACCCTTCC----GGGA-------------------CTACGTGGACCG 716
||||||||| .||| |||.|| |||| |.|.|.|||||.
Sbjct 1555 ATCGTCCAGGTGAAGCCCAGGCCTTG---CCTGCCCCATGGGAAATTCAAGAGCCCCTCTAGCCAGGCGGACCT 1625
Query 717 CACA-----------GGCAACCACGTGCTGAGCATGGCCC---------GC-CTG---GCCCGAGACGTG---C 763
|||| |||..| |.||.||| |.||||| || ||| ||||.| |.||| |
Sbjct 1626 CACACCCCCTTTGGGGGCTTC--CCTGGTGA--AGGGCCCAGAAGGGAGGCACTGGGAGCCCCA-AAGTGGCCC 1694
Query 764 TGGCA----------------GAGATC---CCT-GACCAACTGGTGT-----------------CCT-----AC 795
.|.|| ||| || ||| |.||| ||.||| ||| ||
Sbjct 1695 AGCCACCACCGAAGGGAGTAGGAG-TCAGTCCTCGGCCA--TGCTGTGGTCTGGGCTGGGCCCCCCTCTGTCAC 1765
Query 796 ATGAAGGCACAGGG------------CATTCGCCCGCGTCCCCCACCCG----CAGCACCAACCCACT---CGC 850
|| |.||| |||| .||.||.|||..||.| ||| |||||.|| .||
Sbjct 1766 AT-------CTGGGACACACTCCTAACATT---GCGGGTGCCCAGCCAGAGGCCAG----AACCCTCTGCCAGC 1825
Query 851 CCTCGCAGTCCCCAGCCCGCACGCCCCCTG----------CGTCC-------------CCCCT-----GCACAC 896
||| |||.|||||..|| |.||.||| |||.| ||||| ||..|.
Sbjct 1826 CCT-----TCCTCAGCCTCCA-GGCCTCTGTGGTCAGCCTCGTTCTGGTTTTTTTCTGCCCCTTGAAGGCTGAG 1893
Query 897 GCA------------------CATC----------------------------------------- 903
||| ||.|
Sbjct 1894 GCAGTGTCTTTAGTGTTGCTGCAGCCTTCTCCAAGAATAGGCATTGCTCGGTTAACTGAATCAATG 1959
